RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 MYBP10242 640 aa10□□□□□ -0.81
HPS4-203ENST00000402105 UAP1Q16222 522 aaPredicted RBP10□□□□□ -0.81
HPS4-203ENST00000402105 ASTE1Q2TB18 679 aaPredicted RBP10□□□□□ -0.81
HPS4-203ENST00000402105 TUBB8Q3ZCM7 444 aa10□□□□□ -0.81
HPS4-203ENST00000402105 MFSD14BQ5SR56 506 aa10□□□□□ -0.81
HPS4-203ENST00000402105 SFR1Q86XK3 245 aa10□□□□□ -0.81
HPS4-203ENST00000402105 SCFD1Q8WVM8 642 aa10□□□□□ -0.81
HPS4-203ENST00000402105 HVCN1Q96D96 273 aa10□□□□□ -0.81
HPS4-203ENST00000402105 LRRC27Q9C0I9 530 aa10□□□□□ -0.81
HPS4-203ENST00000402105 KCNK9Q9NPC2 374 aa10□□□□□ -0.81
HPS4-203ENST00000402105 RNF14Q9UBS8 474 aa10□□□□□ -0.81
HPS4-203ENST00000402105 LRP6O75581 1613 aa10□□□□□ -0.81
HPS4-203ENST00000402105 ECM29Q5VYK3 1845 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 PJA2O43164 708 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 SKAP2O75563 359 aaPredicted RBP9.99□□□□□ -0.81
HPS4-203ENST00000402105 SHBGP04278 402 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 LDHCP07864 332 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 VPS41P49754 854 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 SCNN1DP51172 638 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 TCP10Q12799 353 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 IFI16Q16666 785 aaKnown RBP9.99□□□□□ -0.81
HPS4-203ENST00000402105 PARP9Q8IXQ6 854 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 PIGOQ8TEQ8 1089 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 PAIP2Q9BPZ3 127 aaKnown RBP9.99□□□□□ -0.81
HPS4-203ENST00000402105 LZTS2Q9BRK4 669 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 ISCUQ9H1K1 167 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 VCPKMTQ9H867 229 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 NAGPAQ9UK23 515 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 AMFRQ9UKV5 643 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 AKR1B1P15121 316 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 EZRP15311 586 aaKnown RBP9.99□□□□□ -0.81
HPS4-203ENST00000402105 FNTAP49354 379 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 UBXN2AP68543 259 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 ZKSCAN8Q15776 578 aaPredicted RBP9.99□□□□□ -0.81
HPS4-203ENST00000402105 ZNF746Q6NUN9 644 aaPredicted RBP9.99□□□□□ -0.81
HPS4-203ENST00000402105 CYB5D1Q6P9G0 228 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 PHLDB2Q86SQ0 1253 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 WDR66Q8TBY9 1149 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 FMO2Q99518 471 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.99□□□□□ -0.811e-9■■□□□ 14.2
HPS4-203ENST00000402105 OSBPL7Q9BZF2 842 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 NUCKS1Q9H1E3 243 aaKnown RBP9.99□□□□□ -0.81
HPS4-203ENST00000402105 AZI2Q9H6S1 392 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 PKD2L1Q9P0L9 805 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 DBR1Q9UK59 544 aaKnown RBP9.99□□□□□ -0.81
HPS4-203ENST00000402105 USP54Q70EL1 1684 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 G3V3G9 751 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 AFPP02771 609 aaKnown RBP9.99□□□□□ -0.81
HPS4-203ENST00000402105 FGFR4P22455 802 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 MRPL12P52815 198 aaKnown RBP9.99□□□□□ -0.81
HPS4-203ENST00000402105 GSTO1P78417 241 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 MAP2K1Q02750 393 aaPredicted RBP9.99□□□□□ -0.81
HPS4-203ENST00000402105 ITIH3Q06033 890 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 DCAF8Q5TAQ9 597 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 PTF1AQ7RTS3 328 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 ADGRF4Q8IZF3 695 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 IQCDQ96DY2 449 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 PSMD1Q99460 953 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 SLC24A3Q9HC58 644 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 LMTK3Q96Q04 1460 aa9.99□□□□□ -0.81
HPS4-203ENST00000402105 FOXO6A8MYZ6 492 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 RGS16O15492 202 aaPredicted RBP9.98□□□□□ -0.81
HPS4-203ENST00000402105 TBCAO75347 108 aaKnown RBP9.98□□□□□ -0.81
HPS4-203ENST00000402105 MMEP08473 750 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 GALCP54803 685 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 DAGLBQ8NCG7 672 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 CTNNBL1Q8WYA6 563 aaPredicted RBP9.98□□□□□ -0.81
HPS4-203ENST00000402105 CUL5Q93034 780 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 MRRFQ96E11 262 aaKnown RBP9.98□□□□□ -0.81
HPS4-203ENST00000402105 MTMR9Q96QG7 549 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 BHMT2Q9H2M3 363 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 SUFUQ9UMX1 484 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 ADAMTS7Q9UKP4 1686 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 TRIM49P0CI25 452 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 TRIM49CP0CI26 452 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 CHN1P15882 459 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 RFC4P35249 363 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 USP11P51784 963 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 CACNB3P54284 484 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 GTF2IP78347 998 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 IFI35P80217 286 aaPredicted RBP9.98□□□□□ -0.81
HPS4-203ENST00000402105 SF3B3Q15393 1217 aaKnown RBP9.98□□□□□ -0.81
HPS4-203ENST00000402105 DNAJC19Q96DA6 116 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 PRMT1Q99873 361 aaKnown RBP9.98□□□□□ -0.81
HPS4-203ENST00000402105 MXD3Q9BW11 206 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 SPZ1Q9BXG8 430 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 CTTNBP2NLQ9P2B4 639 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 LAMB4A4D0S4 1761 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 PHRF1Q9P1Y6 1649 aaKnown RBP9.98□□□□□ -0.81
HPS4-203ENST00000402105 MED24O75448 989 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 NEBLO76041 1014 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 FSBPO95073 299 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 LCA5LO95447 670 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 HOXA13P31271 388 aaPredicted RBP9.98□□□□□ -0.81
HPS4-203ENST00000402105 HSPA9P38646 679 aaKnown RBP9.98□□□□□ -0.81
HPS4-203ENST00000402105 STAT1P42224 750 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 RBM5P52756 815 aaKnown RBP eCLIP9.98□□□□□ -0.81
HPS4-203ENST00000402105 DR1Q01658 176 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 NEDD9Q14511 834 aa9.98□□□□□ -0.81
HPS4-203ENST00000402105 TRIP13Q15645 432 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms