RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 DDX39AO00148 427 aaKnown RBP13.54□□□□□ -0.24
CLIP4-203ENST00000401617 FANCGO15287 622 aa13.54□□□□□ -0.24
CLIP4-203ENST00000401617 PPP1R12BO60237 982 aaPredicted RBP13.54□□□□□ -0.24
CLIP4-203ENST00000401617 ATP9AO75110 1047 aa13.54□□□□□ -0.24
CLIP4-203ENST00000401617 FAM13AO94988 1023 aa13.54□□□□□ -0.24
CLIP4-203ENST00000401617 NR3C2P08235 984 aa13.54□□□□□ -0.24
CLIP4-203ENST00000401617 TRIM21P19474 475 aaKnown RBP13.54□□□□□ -0.24
CLIP4-203ENST00000401617 CCND2P30279 289 aa13.54□□□□□ -0.24
CLIP4-203ENST00000401617 ADAM9Q13443 819 aa13.54□□□□□ -0.24
CLIP4-203ENST00000401617 PRKG1Q13976 671 aa13.54□□□□□ -0.24
CLIP4-203ENST00000401617 NFIL3Q16649 462 aa13.54□□□□□ -0.24
CLIP4-203ENST00000401617 INPP4AQ96PE3 977 aaPredicted RBP13.54□□□□□ -0.24
CLIP4-203ENST00000401617 CHP1Q99653 195 aa13.54□□□□□ -0.24
CLIP4-203ENST00000401617 SENP7Q9BQF6 1050 aa13.54□□□□□ -0.24
CLIP4-203ENST00000401617 EDEM3Q9BZQ6 932 aa13.54□□□□□ -0.24
CLIP4-203ENST00000401617 ACAD9Q9H845 621 aa13.54□□□□□ -0.24
CLIP4-203ENST00000401617 CYP39A1Q9NYL5 469 aa13.54□□□□□ -0.24
CLIP4-203ENST00000401617 UBE4BO95155 1302 aa13.54□□□□□ -0.24
CLIP4-203ENST00000401617 CETN3O15182 167 aa13.54□□□□□ -0.24
CLIP4-203ENST00000401617 PRPF6O94906 941 aaKnown RBP13.54□□□□□ -0.24
CLIP4-203ENST00000401617 MYCLP12524 364 aaPredicted RBP13.54□□□□□ -0.24
CLIP4-203ENST00000401617 QARSP47897 775 aaKnown RBP13.54□□□□□ -0.24
CLIP4-203ENST00000401617 MAPK7Q13164 816 aa13.54□□□□□ -0.24
CLIP4-203ENST00000401617 FRMD5Q7Z6J6 570 aa13.54□□□□□ -0.24
CLIP4-203ENST00000401617 RDM1Q8NG50 284 aa13.54□□□□□ -0.24
CLIP4-203ENST00000401617 NSUN6Q8TEA1 469 aaKnown RBP13.54□□□□□ -0.24
CLIP4-203ENST00000401617 STRA6Q9BX79 667 aa13.54□□□□□ -0.24
CLIP4-203ENST00000401617 A1CFQ9NQ94 594 aaKnown RBP13.54□□□□□ -0.24
CLIP4-203ENST00000401617 FAM184BQ9ULE4 1060 aa13.54□□□□□ -0.24
CLIP4-203ENST00000401617 SFI1A8K8P3 1242 aa13.53□□□□□ -0.24
CLIP4-203ENST00000401617 CALUO43852 315 aaPredicted RBP13.53□□□□□ -0.24
CLIP4-203ENST00000401617 SFNP31947 248 aa13.53□□□□□ -0.24
CLIP4-203ENST00000401617 JAK3P52333 1124 aa13.53□□□□□ -0.24
CLIP4-203ENST00000401617 KRT76Q01546 638 aa13.53□□□□□ -0.24
CLIP4-203ENST00000401617 KCNMA1Q12791 1236 aa13.53□□□□□ -0.24
CLIP4-203ENST00000401617 CCDC40Q4G0X9 1142 aa13.53□□□□□ -0.24
CLIP4-203ENST00000401617 LBX2Q6XYB7 198 aa13.53□□□□□ -0.24
CLIP4-203ENST00000401617 ZNF720Q7Z2F6 126 aa13.53□□□□□ -0.24
CLIP4-203ENST00000401617 C4orf19Q8IY42 314 aa13.53□□□□□ -0.24
CLIP4-203ENST00000401617 DAW1Q8N136 415 aa13.53□□□□□ -0.24
CLIP4-203ENST00000401617 ZC3H15Q8WU90 426 aaKnown RBP13.53□□□□□ -0.24
CLIP4-203ENST00000401617 PKD2L1Q9P0L9 805 aa13.53□□□□□ -0.24
CLIP4-203ENST00000401617 CSADQ9Y600 493 aa13.53□□□□□ -0.24
CLIP4-203ENST00000401617 EPN1Q9Y6I3 576 aaPredicted RBP13.53□□□□□ -0.24
CLIP4-203ENST00000401617 ASTN1O14525 1302 aa13.53□□□□□ -0.24
CLIP4-203ENST00000401617 ZMYM2Q9UBW7 1377 aa13.52□□□□□ -0.24
CLIP4-203ENST00000401617 ARHGEF35A5YM69 484 aa13.52□□□□□ -0.24
CLIP4-203ENST00000401617 TGFB1I1O43294 461 aa13.52□□□□□ -0.24
CLIP4-203ENST00000401617 STAM2O75886 525 aa13.52□□□□□ -0.24
CLIP4-203ENST00000401617 RGS20O76081 388 aa13.52□□□□□ -0.24
CLIP4-203ENST00000401617 GCNT3O95395 438 aa13.52□□□□□ -0.24
CLIP4-203ENST00000401617 CCNE2O96020 404 aa13.52□□□□□ -0.24
CLIP4-203ENST00000401617 NR2F2P24468 414 aa13.52□□□□□ -0.24
CLIP4-203ENST00000401617 TSR1Q2NL82 804 aaKnown RBP13.52□□□□□ -0.24
CLIP4-203ENST00000401617 TREML2Q5T2D2 321 aa13.52□□□□□ -0.24
CLIP4-203ENST00000401617 USP50Q70EL3 339 aaPredicted RBP13.52□□□□□ -0.24
CLIP4-203ENST00000401617 MYCT1Q8N699 235 aa13.52□□□□□ -0.24
CLIP4-203ENST00000401617 CHST13Q8NET6 341 aa13.52□□□□□ -0.24
CLIP4-203ENST00000401617 POLD4Q9HCU8 107 aa13.52□□□□□ -0.24
CLIP4-203ENST00000401617 DNAI1Q9UI46 699 aa13.52□□□□□ -0.24
CLIP4-203ENST00000401617 DOCK5Q9H7D0 1870 aa13.52□□□□□ -0.24
CLIP4-203ENST00000401617 A0A0G2JLL6 359 aaPredicted RBP13.52□□□□□ -0.25
CLIP4-203ENST00000401617 WDR64B1ANS9 1081 aa13.52□□□□□ -0.25
CLIP4-203ENST00000401617 EPHB6O15197 1021 aa13.52□□□□□ -0.25
CLIP4-203ENST00000401617 PPP1R37O75864 691 aa13.52□□□□□ -0.25
CLIP4-203ENST00000401617 NDUFA10O95299 355 aa13.52□□□□□ -0.25
CLIP4-203ENST00000401617 IREB2P48200 963 aaKnown RBP13.52□□□□□ -0.25
CLIP4-203ENST00000401617 PPATQ06203 517 aa13.52□□□□□ -0.25
CLIP4-203ENST00000401617 ZNF746Q6NUN9 644 aaPredicted RBP13.52□□□□□ -0.25
CLIP4-203ENST00000401617 PADI6Q6TGC4 694 aa13.52□□□□□ -0.25
CLIP4-203ENST00000401617 PRRT2Q7Z6L0 340 aaPredicted RBP13.52□□□□□ -0.25
CLIP4-203ENST00000401617 NLRX1Q86UT6 975 aa13.52□□□□□ -0.25
CLIP4-203ENST00000401617 ZNF397Q8NF99 534 aaPredicted RBP13.52□□□□□ -0.25
CLIP4-203ENST00000401617 CNKSR2Q8WXI2 1034 aa13.52□□□□□ -0.25
CLIP4-203ENST00000401617 PLAGL2Q9UPG8 496 aa13.52□□□□□ -0.25
CLIP4-203ENST00000401617 SLC16A3O15427 465 aaKnown RBP13.51□□□□□ -0.25
CLIP4-203ENST00000401617 NR3C1P04150 777 aa13.51□□□□□ -0.25
CLIP4-203ENST00000401617 MAPTP10636 758 aaKnown RBP13.51□□□□□ -0.25
CLIP4-203ENST00000401617 KCNA2P16389 499 aa13.51□□□□□ -0.25
CLIP4-203ENST00000401617 NMT1P30419 496 aaKnown RBP13.51□□□□□ -0.25
CLIP4-203ENST00000401617 RARRES1P49788 294 aa13.51□□□□□ -0.25
CLIP4-203ENST00000401617 PPP2R3AQ06190 1150 aa13.51□□□□□ -0.25
CLIP4-203ENST00000401617 KCNA1Q09470 495 aa13.51□□□□□ -0.25
CLIP4-203ENST00000401617 ZNF662Q6ZS27 426 aa13.51□□□□□ -0.25
CLIP4-203ENST00000401617 CCDC170Q8IYT3 715 aa13.51□□□□□ -0.25
CLIP4-203ENST00000401617 PROCA1Q8NCQ7 364 aaPredicted RBP13.51□□□□□ -0.25
CLIP4-203ENST00000401617 ACRBPQ8NEB7 543 aa13.51□□□□□ -0.25
CLIP4-203ENST00000401617 BAP1Q92560 729 aa13.51□□□□□ -0.25
CLIP4-203ENST00000401617 PCMTD1Q96MG8 357 aaPredicted RBP13.51□□□□□ -0.25
CLIP4-203ENST00000401617 WDR24Q96S15 920 aa13.51□□□□□ -0.25
CLIP4-203ENST00000401617 REXO2Q9Y3B8 237 aaKnown RBP13.51□□□□□ -0.25
CLIP4-203ENST00000401617 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.51□□□□□ -0.25
CLIP4-203ENST00000401617 NFASCO94856 1347 aa13.51□□□□□ -0.25
CLIP4-203ENST00000401617 SCN4AP35499 1836 aa13.51□□□□□ -0.25
CLIP4-203ENST00000401617 A0A0U1RQJ8 604 aa13.51□□□□□ -0.25
CLIP4-203ENST00000401617 TESPA1A2RU30 521 aaPredicted RBP13.51□□□□□ -0.25
CLIP4-203ENST00000401617 CXCL11O14625 94 aa13.51□□□□□ -0.25
CLIP4-203ENST00000401617 RPL13P26373 211 aaKnown RBP13.51□□□□□ -0.25
CLIP4-203ENST00000401617 ARHGAP25P42331 645 aa13.51□□□□□ -0.25
CLIP4-203ENST00000401617 PSMC5P62195 406 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms