RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 JPH1Q9HDC5 661 aaPredicted RBP28.4■■■□□ 2.14
CPNE1-205ENST00000401607 PCDHA10Q9Y5I2 948 aa28.4■■■□□ 2.14
CPNE1-205ENST00000401607 N4BP3O15049 544 aa28.39■■■□□ 2.14
CPNE1-205ENST00000401607 PGK2P07205 417 aa28.39■■■□□ 2.14
CPNE1-205ENST00000401607 GAP43P17677 238 aa28.39■■■□□ 2.14
CPNE1-205ENST00000401607 GUCY2CP25092 1073 aa28.39■■■□□ 2.14
CPNE1-205ENST00000401607 SP2Q02086 613 aa28.39■■■□□ 2.14
CPNE1-205ENST00000401607 SMAP1Q8IYB5 467 aaPredicted RBP28.39■■■□□ 2.14
CPNE1-205ENST00000401607 CNOT6LQ96LI5 555 aaKnown RBP28.39■■■□□ 2.14
CPNE1-205ENST00000401607 MMP19Q99542 508 aa28.39■■■□□ 2.14
CPNE1-205ENST00000401607 KCTD10Q9H3F6 313 aa28.39■■■□□ 2.14
CPNE1-205ENST00000401607 MAGEC2Q9UBF1 373 aaPredicted RBP28.39■■■□□ 2.14
CPNE1-205ENST00000401607 FAM13AO94988 1023 aa28.39■■■□□ 2.13
CPNE1-205ENST00000401607 ZBTB48P10074 688 aaPredicted RBP28.39■■■□□ 2.13
CPNE1-205ENST00000401607 RARRES1P49788 294 aa28.39■■■□□ 2.13
CPNE1-205ENST00000401607 LRRC55Q6ZSA7 311 aa28.39■■■□□ 2.13
CPNE1-205ENST00000401607 FAM114A1Q8IWE2 563 aa28.39■■■□□ 2.13
CPNE1-205ENST00000401607 NELFCDQ8IXH7 590 aa28.39■■■□□ 2.13
CPNE1-205ENST00000401607 SMCR8Q8TEV9 937 aaPredicted RBP28.39■■■□□ 2.13
CPNE1-205ENST00000401607 TSG101Q99816 390 aa28.39■■■□□ 2.13
CPNE1-205ENST00000401607 PORCNQ9H237 461 aa28.39■■■□□ 2.13
CPNE1-205ENST00000401607 OLFML3Q9NRN5 406 aa28.39■■■□□ 2.13
CPNE1-205ENST00000401607 SLC9A2Q9UBY0 812 aa28.39■■■□□ 2.13
CPNE1-205ENST00000401607 ODF2LQ9ULJ1 636 aa28.39■■■□□ 2.13
CPNE1-205ENST00000401607 SFI1A8K8P3 1242 aa28.38■■■□□ 2.13
CPNE1-205ENST00000401607 KIF20AO95235 890 aa28.38■■■□□ 2.13
CPNE1-205ENST00000401607 YWHABP31946 246 aaKnown RBP28.38■■■□□ 2.13
CPNE1-205ENST00000401607 ZNF131P52739 623 aa28.38■■■□□ 2.13
CPNE1-205ENST00000401607 KCTD2Q14681 263 aa28.38■■■□□ 2.13
CPNE1-205ENST00000401607 PADI6Q6TGC4 694 aa28.38■■■□□ 2.13
CPNE1-205ENST00000401607 SEPT14Q6ZU15 432 aa28.38■■■□□ 2.13
CPNE1-205ENST00000401607 MYBP10242 640 aa28.37■■■□□ 2.13
CPNE1-205ENST00000401607 C17orf53Q8N3J3 647 aaPredicted RBP28.37■■■□□ 2.13
CPNE1-205ENST00000401607 SFPQP23246 707 aaKnown RBP eCLIP28.37■■■□□ 2.138e-7■□□□□ 11.1
CPNE1-205ENST00000401607 MAPK7Q13164 816 aa28.37■■■□□ 2.13
CPNE1-205ENST00000401607 CHADLQ6NUI6 762 aa28.37■■■□□ 2.13
CPNE1-205ENST00000401607 EFCC1Q9HA90 598 aa28.37■■■□□ 2.13
CPNE1-205ENST00000401607 PARVGQ9HBI0 331 aa28.37■■■□□ 2.13
CPNE1-205ENST00000401607 WDR81Q562E7 1941 aa28.37■■■□□ 2.13
CPNE1-205ENST00000401607 TMEM150BA6NC51 233 aa28.36■■■□□ 2.13
CPNE1-205ENST00000401607 SOCS7O14512 581 aa28.36■■■□□ 2.13
CPNE1-205ENST00000401607 HOXD13P35453 343 aa28.36■■■□□ 2.13
CPNE1-205ENST00000401607 ACTR2P61160 394 aa28.36■■■□□ 2.13
CPNE1-205ENST00000401607 BMT2Q1RMZ1 405 aa28.36■■■□□ 2.13
CPNE1-205ENST00000401607 WDR78Q5VTH9 848 aa28.36■■■□□ 2.13
CPNE1-205ENST00000401607 DAW1Q8N136 415 aa28.36■■■□□ 2.13
CPNE1-205ENST00000401607 GPRC5AQ8NFJ5 357 aa28.36■■■□□ 2.13
CPNE1-205ENST00000401607 FIZ1Q96SL8 496 aa28.36■■■□□ 2.13
CPNE1-205ENST00000401607 MRPL44Q9H9J2 332 aaKnown RBP28.36■■■□□ 2.13
CPNE1-205ENST00000401607 ITIH6Q6UXX5 1313 aa28.35■■■□□ 2.13
CPNE1-205ENST00000401607 LGALS16A8MUM7 142 aa28.35■■■□□ 2.13
CPNE1-205ENST00000401607 NKRFO15226 690 aaKnown RBP eCLIP28.35■■■□□ 2.13
CPNE1-205ENST00000401607 SORBS3O60504 671 aa28.35■■■□□ 2.13
CPNE1-205ENST00000401607 ABHD15Q6UXT9 468 aa28.35■■■□□ 2.13
CPNE1-205ENST00000401607 MYCT1Q8N699 235 aa28.35■■■□□ 2.13
CPNE1-205ENST00000401607 TUBGCP2Q9BSJ2 902 aa28.35■■■□□ 2.13
CPNE1-205ENST00000401607 GABBR1Q9UBS5 961 aa28.35■■■□□ 2.13
CPNE1-205ENST00000401607 TRPM7Q96QT4 1865 aa28.35■■■□□ 2.13
CPNE1-205ENST00000401607 HIP1RO75146 1068 aa28.34■■■□□ 2.13
CPNE1-205ENST00000401607 FGFR1OPO95684 399 aaKnown RBP28.34■■■□□ 2.13
CPNE1-205ENST00000401607 PSAPP07602 524 aa28.34■■■□□ 2.13
CPNE1-205ENST00000401607 SP4Q02446 784 aa28.34■■■□□ 2.13
CPNE1-205ENST00000401607 GOLGA8FQ08AF8 430 aa28.34■■■□□ 2.13
CPNE1-205ENST00000401607 GOLGA8DPQ0D2H9 430 aa28.34■■■□□ 2.13
CPNE1-205ENST00000401607 ANKRD13CQ8N6S4 541 aa28.34■■■□□ 2.13
CPNE1-205ENST00000401607 ZNF507Q8TCN5 953 aa28.34■■■□□ 2.13
CPNE1-205ENST00000401607 PTPN18Q99952 460 aa28.34■■■□□ 2.13
CPNE1-205ENST00000401607 ANKEF1Q9NU02 776 aa28.34■■■□□ 2.13
CPNE1-205ENST00000401607 SEL1LQ9UBV2 794 aa28.34■■■□□ 2.13
CPNE1-205ENST00000401607 BACH1O14867 736 aa28.34■■■□□ 2.13
CPNE1-205ENST00000401607 ZNF862O60290 1169 aa28.34■■■□□ 2.13
CPNE1-205ENST00000401607 PRPF6O94906 941 aaKnown RBP28.34■■■□□ 2.13
CPNE1-205ENST00000401607 SKILP12757 684 aa28.34■■■□□ 2.13
CPNE1-205ENST00000401607 UTP14CQ5TAP6 766 aaKnown RBP28.34■■■□□ 2.13
CPNE1-205ENST00000401607 CYFIP1Q7L576 1253 aa28.34■■■□□ 2.13
CPNE1-205ENST00000401607 MORF4L1Q9UBU8 362 aa28.34■■■□□ 2.13
CPNE1-205ENST00000401607 B4DLN1 442 aa28.33■■■□□ 2.13
CPNE1-205ENST00000401607 STBD1O95210 358 aa28.33■■■□□ 2.13
CPNE1-205ENST00000401607 GCNT3O95395 438 aa28.33■■■□□ 2.13
CPNE1-205ENST00000401607 UBA1P22314 1058 aaKnown RBP28.33■■■□□ 2.13
CPNE1-205ENST00000401607 HUNKP57058 714 aa28.33■■■□□ 2.13
CPNE1-205ENST00000401607 FKBP3Q00688 224 aaKnown RBP28.33■■■□□ 2.13
CPNE1-205ENST00000401607 PLA2G4FQ68DD2 849 aa28.33■■■□□ 2.13
CPNE1-205ENST00000401607 CCDC60Q8IWA6 550 aaPredicted RBP28.33■■■□□ 2.13
CPNE1-205ENST00000401607 ZC3H3Q8IXZ2 948 aaKnown RBP28.33■■■□□ 2.13
CPNE1-205ENST00000401607 SH2D3AQ9BRG2 576 aa28.33■■■□□ 2.13
CPNE1-205ENST00000401607 PRKCSHP14314 528 aaPredicted RBP28.32■■■□□ 2.12
CPNE1-205ENST00000401607 NMT1P30419 496 aaKnown RBP28.32■■■□□ 2.12
CPNE1-205ENST00000401607 MTIF2P46199 727 aaKnown RBP28.32■■■□□ 2.12
CPNE1-205ENST00000401607 GCLCP48506 637 aaPredicted RBP28.32■■■□□ 2.12
CPNE1-205ENST00000401607 CCNA1P78396 465 aa28.32■■■□□ 2.12
CPNE1-205ENST00000401607 UBXN1Q04323 297 aa28.32■■■□□ 2.12
CPNE1-205ENST00000401607 KNOP1Q1ED39 458 aaKnown RBP28.32■■■□□ 2.12
CPNE1-205ENST00000401607 MIIPQ5JXC2 388 aa28.32■■■□□ 2.12
CPNE1-205ENST00000401607 CEP135Q66GS9 1140 aa28.32■■■□□ 2.12
CPNE1-205ENST00000401607 SWSAP1Q6NVH7 229 aa28.32■■■□□ 2.12
CPNE1-205ENST00000401607 ANO5Q75V66 913 aa28.32■■■□□ 2.12
CPNE1-205ENST00000401607 ATP6V0A1Q93050 837 aa28.32■■■□□ 2.12
CPNE1-205ENST00000401607 ZNFX1Q9P2E3 1918 aaKnown RBP28.32■■■□□ 2.12
CPNE1-205ENST00000401607 USO1O60763 962 aaKnown RBP28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms