RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 SH2D3AQ9BRG2 576 aa17.87■□□□□ 0.45
HMGA1-204ENST00000401473 C11orf49Q9H6J7 331 aa17.87■□□□□ 0.45
HMGA1-204ENST00000401473 ZSWIM4Q9H7M6 989 aa17.87■□□□□ 0.45
HMGA1-204ENST00000401473 RANBP2P49792 3224 aaKnown RBP17.86■□□□□ 0.45
HMGA1-204ENST00000401473 CABYRO75952 493 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 CCT6AP40227 531 aaKnown RBP17.86■□□□□ 0.45
HMGA1-204ENST00000401473 UBA7P41226 1012 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 SLC26A2P50443 739 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 ITGA7Q13683 1181 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 ADALQ6DHV7 355 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 POTEGQ6S5H5 508 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 ANO5Q75V66 913 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 C4orf19Q8IY42 314 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 LRRC15Q8TF66 581 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 ATP6V0A1Q93050 837 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 PLIN2Q99541 437 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 TUFT1Q9NNX1 390 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 STARD7Q9NQZ5 370 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 ZNF215Q9UL58 517 aaPredicted RBP17.86■□□□□ 0.45
HMGA1-204ENST00000401473 EVPLQ92817 2033 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 ATN1P54259 1190 aaPredicted RBP17.86■□□□□ 0.45
HMGA1-204ENST00000401473 PRKCEQ02156 737 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 GRB10Q13322 594 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 KARSQ15046 597 aaKnown RBP17.86■□□□□ 0.45
HMGA1-204ENST00000401473 ZRSR1Q15695 479 aaKnown RBP17.86■□□□□ 0.45
HMGA1-204ENST00000401473 TPRNQ4KMQ1 711 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 CABP7Q86V35 215 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 CKAP2LQ8IYA6 745 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 ERMNQ8TAM6 284 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 PIGOQ8TEQ8 1089 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 PNMA5Q96PV4 448 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 PANK2Q9BZ23 570 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 CCSER1Q9C0I3 900 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 KIAA1024Q9UPX6 916 aa17.86■□□□□ 0.45
HMGA1-204ENST00000401473 A0A087X0B3 334 aa17.85■□□□□ 0.45
HMGA1-204ENST00000401473 ZBTB42B2RXF5 422 aa17.85■□□□□ 0.45
HMGA1-204ENST00000401473 HYIQ5T013 277 aa17.85■□□□□ 0.45
HMGA1-204ENST00000401473 HAUS3Q68CZ6 603 aa17.85■□□□□ 0.45
HMGA1-204ENST00000401473 KCNK18Q7Z418 384 aa17.85■□□□□ 0.45
HMGA1-204ENST00000401473 SLC43A3Q8NBI5 491 aa17.85■□□□□ 0.45
HMGA1-204ENST00000401473 NEK9Q8TD19 979 aa17.85■□□□□ 0.45
HMGA1-204ENST00000401473 ATP8B4Q8TF62 1192 aa17.85■□□□□ 0.45
HMGA1-204ENST00000401473 KATNAL1Q9BW62 490 aa17.85■□□□□ 0.45
HMGA1-204ENST00000401473 HDAC6Q9UBN7 1215 aa17.85■□□□□ 0.45
HMGA1-204ENST00000401473 LYPLA2O95372 231 aa17.84■□□□□ 0.45
HMGA1-204ENST00000401473 OATP04181 439 aa17.84■□□□□ 0.45
HMGA1-204ENST00000401473 INSRRP14616 1297 aa17.84■□□□□ 0.45
HMGA1-204ENST00000401473 CDK7P50613 346 aa17.84■□□□□ 0.45
HMGA1-204ENST00000401473 SLC39A5Q6ZMH5 540 aa17.84■□□□□ 0.45
HMGA1-204ENST00000401473 DDX19AQ9NUU7 478 aaKnown RBP17.84■□□□□ 0.45
HMGA1-204ENST00000401473 SETD4Q9NVD3 440 aa17.84■□□□□ 0.45
HMGA1-204ENST00000401473 CEP290O15078 2479 aa17.84■□□□□ 0.45
HMGA1-204ENST00000401473 SMIM10L2AP0DMW4 78 aa17.84■□□□□ 0.45
HMGA1-204ENST00000401473 SMIM10L2BP0DMW5 78 aa17.84■□□□□ 0.45
HMGA1-204ENST00000401473 YWHABP31946 246 aaKnown RBP17.84■□□□□ 0.45
HMGA1-204ENST00000401473 NPEPPSP55786 919 aa17.84■□□□□ 0.45
HMGA1-204ENST00000401473 ZNF200P98182 395 aaPredicted RBP17.84■□□□□ 0.45
HMGA1-204ENST00000401473 LRRC26Q2I0M4 334 aa17.84■□□□□ 0.45
HMGA1-204ENST00000401473 XKR3Q5GH77 459 aa17.84■□□□□ 0.45
HMGA1-204ENST00000401473 RESP18Q5W5W9 173 aa17.84■□□□□ 0.45
HMGA1-204ENST00000401473 BBXQ8WY36 941 aaPredicted RBP17.84■□□□□ 0.45
HMGA1-204ENST00000401473 ZBTB10Q96DT7 871 aa17.84■□□□□ 0.45
HMGA1-204ENST00000401473 CEP89Q96ST8 783 aa17.84■□□□□ 0.45
HMGA1-204ENST00000401473 DDX11L8A8MPP1 907 aa17.83■□□□□ 0.44
HMGA1-204ENST00000401473 HBP1O60381 514 aa17.83■□□□□ 0.44
HMGA1-204ENST00000401473 GADD45BO75293 160 aaPredicted RBP17.83■□□□□ 0.44
HMGA1-204ENST00000401473 CMA1P23946 247 aa17.83■□□□□ 0.44
HMGA1-204ENST00000401473 ADAM17P78536 824 aa17.83■□□□□ 0.44
HMGA1-204ENST00000401473 MARCH8Q5T0T0 291 aa17.83■□□□□ 0.44
HMGA1-204ENST00000401473 PLA2G4FQ68DD2 849 aa17.83■□□□□ 0.44
HMGA1-204ENST00000401473 NFRKBQ6P4R8 1299 aa17.83■□□□□ 0.44
HMGA1-204ENST00000401473 C7orf31Q8N865 590 aa17.83■□□□□ 0.44
HMGA1-204ENST00000401473 TRAPPC12Q8WVT3 735 aa17.83■□□□□ 0.44
HMGA1-204ENST00000401473 NIFKQ9BYG3 293 aaKnown RBP17.83■□□□□ 0.44
HMGA1-204ENST00000401473 NRBP2Q9NSY0 501 aa17.83■□□□□ 0.44
HMGA1-204ENST00000401473 TRPC6Q9Y210 931 aa17.83■□□□□ 0.44
HMGA1-204ENST00000401473 STK24Q9Y6E0 443 aa17.83■□□□□ 0.44
HMGA1-204ENST00000401473 A0A1B0GVL5 298 aa17.82■□□□□ 0.44
HMGA1-204ENST00000401473 E9PMD0 336 aa17.82■□□□□ 0.44
HMGA1-204ENST00000401473 ARVCFO00192 962 aa17.82■□□□□ 0.44
HMGA1-204ENST00000401473 MUTP22033 750 aa17.82■□□□□ 0.44
HMGA1-204ENST00000401473 HOXC8P31273 242 aa17.82■□□□□ 0.44
HMGA1-204ENST00000401473 RGS19P49795 217 aa17.82■□□□□ 0.44
HMGA1-204ENST00000401473 TARBP2Q15633 366 aaKnown RBP17.82■□□□□ 0.44
HMGA1-204ENST00000401473 TMEM119Q4V9L6 283 aa17.82■□□□□ 0.44
HMGA1-204ENST00000401473 GDF6Q6KF10 455 aaPredicted RBP17.82■□□□□ 0.44
HMGA1-204ENST00000401473 PDILTQ8N807 584 aa17.82■□□□□ 0.44
HMGA1-204ENST00000401473 TMEM87AQ8NBN3 555 aa17.82■□□□□ 0.44
HMGA1-204ENST00000401473 NACC1Q96RE7 527 aa17.82■□□□□ 0.44
HMGA1-204ENST00000401473 CTAGE1Q96RT6 745 aa17.82■□□□□ 0.44
HMGA1-204ENST00000401473 GTF2IRD1Q9UHL9 959 aa17.82■□□□□ 0.44
HMGA1-204ENST00000401473 A0A0U1RQG5 324 aaPredicted RBP17.82■□□□□ 0.44
HMGA1-204ENST00000401473 DKC1O60832 514 aaKnown RBP eCLIP17.82■□□□□ 0.44
HMGA1-204ENST00000401473 PLCG1P19174 1290 aa17.82■□□□□ 0.44
HMGA1-204ENST00000401473 SNX17Q15036 470 aa17.82■□□□□ 0.44
HMGA1-204ENST00000401473 NAALADL2Q58DX5 795 aa17.82■□□□□ 0.44
HMGA1-204ENST00000401473 FAM47CQ5HY64 1035 aa17.82■□□□□ 0.44
HMGA1-204ENST00000401473 SESTD1Q86VW0 696 aa17.82■□□□□ 0.44
HMGA1-204ENST00000401473 LMBR1Q8WVP7 490 aa17.82■□□□□ 0.44
HMGA1-204ENST00000401473 SEPT9Q9UHD8 586 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms