RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 IGSF9BQ9UPX0 1349 aa20.8■□□□□ 0.92
UFD1-202ENST00000399523 GSTTP1A0A1W2PQM5 241 aa20.8■□□□□ 0.92
UFD1-202ENST00000399523 SRGAP2BP0DMP2 458 aa20.8■□□□□ 0.92
UFD1-202ENST00000399523 MARK3P27448 753 aa20.8■□□□□ 0.92
UFD1-202ENST00000399523 AAASQ9NRG9 546 aa20.8■□□□□ 0.92
UFD1-202ENST00000399523 LRFN2Q9ULH4 789 aa20.8■□□□□ 0.92
UFD1-202ENST00000399523 TRPV2Q9Y5S1 764 aa20.8■□□□□ 0.92
UFD1-202ENST00000399523 RRN3P2A6NIE6 340 aa20.79■□□□□ 0.92
UFD1-202ENST00000399523 CYTH3O43739 400 aa20.79■□□□□ 0.92
UFD1-202ENST00000399523 FGF18O76093 207 aa20.79■□□□□ 0.92
UFD1-202ENST00000399523 SDSP20132 328 aa20.79■□□□□ 0.92
UFD1-202ENST00000399523 TECP42680 631 aa20.79■□□□□ 0.92
UFD1-202ENST00000399523 ID4P47928 161 aa20.79■□□□□ 0.92
UFD1-202ENST00000399523 MTMR3Q13615 1198 aa20.79■□□□□ 0.92
UFD1-202ENST00000399523 FAM43BQ6ZT52 329 aaPredicted RBP20.79■□□□□ 0.92
UFD1-202ENST00000399523 FAM49AQ9H0Q0 323 aaPredicted RBP20.79■□□□□ 0.92
UFD1-202ENST00000399523 TMX1Q9H3N1 280 aa20.79■□□□□ 0.92
UFD1-202ENST00000399523 SMARCAD1Q9H4L7 1026 aa20.79■□□□□ 0.92
UFD1-202ENST00000399523 CNNM2Q9H8M5 875 aa20.79■□□□□ 0.92
UFD1-202ENST00000399523 SORCS3Q9UPU3 1222 aa20.79■□□□□ 0.92
UFD1-202ENST00000399523 ATP9AO75110 1047 aa20.78■□□□□ 0.92
UFD1-202ENST00000399523 KCNA2P16389 499 aa20.78■□□□□ 0.92
UFD1-202ENST00000399523 HOXB8P17481 243 aaPredicted RBP20.78■□□□□ 0.92
UFD1-202ENST00000399523 SARSP49591 514 aaKnown RBP20.78■□□□□ 0.92
UFD1-202ENST00000399523 PAK2Q13177 524 aa20.78■□□□□ 0.92
UFD1-202ENST00000399523 GRM4Q14833 912 aa20.78■□□□□ 0.92
UFD1-202ENST00000399523 IMMTQ16891 758 aaKnown RBP20.78■□□□□ 0.92
UFD1-202ENST00000399523 NLRX1Q86UT6 975 aa20.78■□□□□ 0.92
UFD1-202ENST00000399523 GLG1Q92896 1179 aa20.78■□□□□ 0.92
UFD1-202ENST00000399523 NKD2Q969F2 451 aaPredicted RBP20.78■□□□□ 0.92
UFD1-202ENST00000399523 ZBTB10Q96DT7 871 aa20.78■□□□□ 0.92
UFD1-202ENST00000399523 NR2E1Q9Y466 385 aa20.78■□□□□ 0.92
UFD1-202ENST00000399523 CACNA1BQ00975 2339 aa20.78■□□□□ 0.92
UFD1-202ENST00000399523 M0QZ92 97 aa20.77■□□□□ 0.92
UFD1-202ENST00000399523 BRD1O95696 1058 aa20.77■□□□□ 0.92
UFD1-202ENST00000399523 INSRRP14616 1297 aa20.77■□□□□ 0.92
UFD1-202ENST00000399523 IGBP1P78318 339 aa20.77■□□□□ 0.92
UFD1-202ENST00000399523 GPRASP2Q96D09 838 aa20.77■□□□□ 0.92
UFD1-202ENST00000399523 DSCC1Q9BVC3 393 aa20.77■□□□□ 0.92
UFD1-202ENST00000399523 CELF4Q9BZC1 486 aaKnown RBP20.77■□□□□ 0.92
UFD1-202ENST00000399523 TMEM260Q9NX78 707 aa20.77■□□□□ 0.92
UFD1-202ENST00000399523 LZTS1Q9Y250 596 aa20.77■□□□□ 0.92
UFD1-202ENST00000399523 PCDHB7Q9Y5E2 793 aa20.77■□□□□ 0.92
UFD1-202ENST00000399523 KDM3AQ9Y4C1 1321 aa20.77■□□□□ 0.91
UFD1-202ENST00000399523 DMXL1Q9Y485 3027 aa20.76■□□□□ 0.91
UFD1-202ENST00000399523 SP100P23497 879 aaPredicted RBP20.76■□□□□ 0.91
UFD1-202ENST00000399523 SPOUT1Q5T280 376 aaKnown RBP20.76■□□□□ 0.91
UFD1-202ENST00000399523 ASTLQ6HA08 431 aaPredicted RBP20.76■□□□□ 0.91
UFD1-202ENST00000399523 FRMD5Q7Z6J6 570 aa20.76■□□□□ 0.91
UFD1-202ENST00000399523 THNSL1Q8IYQ7 743 aa20.76■□□□□ 0.91
UFD1-202ENST00000399523 RILPL2Q969X0 211 aa20.76■□□□□ 0.91
UFD1-202ENST00000399523 CDHR1Q96JP9 859 aa20.76■□□□□ 0.91
UFD1-202ENST00000399523 APOL5Q9BWW9 433 aa20.76■□□□□ 0.91
UFD1-202ENST00000399523 PCDHA2Q9Y5H9 948 aa20.76■□□□□ 0.91
UFD1-202ENST00000399523 TBKBP1A7MCY6 615 aa20.75■□□□□ 0.91
UFD1-202ENST00000399523 PIK3CDO00329 1044 aa20.75■□□□□ 0.91
UFD1-202ENST00000399523 TMEM62Q0P6H9 643 aa20.75■□□□□ 0.91
UFD1-202ENST00000399523 MCTP2Q6DN12 878 aa20.75■□□□□ 0.91
UFD1-202ENST00000399523 USP17L6PQ6QN14 398 aa20.75■□□□□ 0.91
UFD1-202ENST00000399523 CYB5R4Q7L1T6 521 aa20.75■□□□□ 0.91
UFD1-202ENST00000399523 ADSSL1Q8N142 457 aa20.75■□□□□ 0.91
UFD1-202ENST00000399523 COLGALT1Q8NBJ5 622 aa20.75■□□□□ 0.91
UFD1-202ENST00000399523 TYW1Q9NV66 732 aaKnown RBP20.75■□□□□ 0.91
UFD1-202ENST00000399523 RNF216Q9NWF9 866 aaPredicted RBP20.75■□□□□ 0.91
UFD1-202ENST00000399523 MEIS2O14770 477 aa20.74■□□□□ 0.91
UFD1-202ENST00000399523 CLCN5P51795 746 aa20.74■□□□□ 0.91
UFD1-202ENST00000399523 PLCB3Q01970 1234 aa20.74■□□□□ 0.91
UFD1-202ENST00000399523 FAM102BQ5T8I3 360 aa20.74■□□□□ 0.91
UFD1-202ENST00000399523 CWC27Q6UX04 472 aaKnown RBP20.74■□□□□ 0.91
UFD1-202ENST00000399523 NME8Q8N427 588 aa20.74■□□□□ 0.91
UFD1-202ENST00000399523 SMARCC2Q8TAQ2 1214 aa20.74■□□□□ 0.91
UFD1-202ENST00000399523 NECTIN4Q96NY8 510 aa20.74■□□□□ 0.91
UFD1-202ENST00000399523 PCYT2Q99447 389 aa20.74■□□□□ 0.91
UFD1-202ENST00000399523 TSHZ2Q9NRE2 1034 aa20.74■□□□□ 0.91
UFD1-202ENST00000399523 C2CD4DB7Z1M9 353 aa20.73■□□□□ 0.91
UFD1-202ENST00000399523 MGEA5O60502 916 aa20.73■□□□□ 0.91
UFD1-202ENST00000399523 ITGB5P18084 799 aa20.73■□□□□ 0.91
UFD1-202ENST00000399523 KRT76Q01546 638 aa20.73■□□□□ 0.91
UFD1-202ENST00000399523 APOBRQ0VD83 1088 aa20.73■□□□□ 0.91
UFD1-202ENST00000399523 TMEM266Q2M3C6 531 aa20.73■□□□□ 0.91
UFD1-202ENST00000399523 PLPP4Q5VZY2 271 aa20.73■□□□□ 0.91
UFD1-202ENST00000399523 MRPS27Q92552 414 aaKnown RBP20.73■□□□□ 0.91
UFD1-202ENST00000399523 TNPO1Q92973 898 aaKnown RBP20.73■□□□□ 0.91
UFD1-202ENST00000399523 CUL5Q93034 780 aa20.73■□□□□ 0.91
UFD1-202ENST00000399523 CWH43Q9H720 699 aa20.73■□□□□ 0.91
UFD1-202ENST00000399523 ERVK-5Q9HDB9 667 aa20.73■□□□□ 0.91
UFD1-202ENST00000399523 NGRNQ9NPE2 291 aaKnown RBP20.73■□□□□ 0.91
UFD1-202ENST00000399523 RGS18Q9NS28 235 aa20.73■□□□□ 0.91
UFD1-202ENST00000399523 C1orf112Q9NSG2 853 aa20.73■□□□□ 0.91
UFD1-202ENST00000399523 HCSTQ9UBK5 93 aa20.73■□□□□ 0.91
UFD1-202ENST00000399523 TPRP12270 2363 aaKnown RBP20.73■□□□□ 0.91
UFD1-202ENST00000399523 EPG5Q9HCE0 2579 aa20.73■□□□□ 0.91
UFD1-202ENST00000399523 NCOR2Q9Y618 2525 aa20.72■□□□□ 0.91
UFD1-202ENST00000399523 SMIM35A0A1B0GVV1 85 aa20.72■□□□□ 0.91
UFD1-202ENST00000399523 HIDE1A8MVS5 230 aa20.72■□□□□ 0.91
UFD1-202ENST00000399523 C9IYK1 514 aa20.72■□□□□ 0.91
UFD1-202ENST00000399523 LAG3P18627 525 aa20.72■□□□□ 0.91
UFD1-202ENST00000399523 TROAPQ12815 778 aa20.72■□□□□ 0.91
UFD1-202ENST00000399523 NFX1Q12986 1120 aaKnown RBP20.72■□□□□ 0.91
UFD1-202ENST00000399523 TPRNQ4KMQ1 711 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms