RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 DDIT3P35638 169 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 PEX3P56589 373 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 THOC5Q13769 683 aaKnown RBP8.6□□□□□ -1.03
USP47-203ENST00000399455 ZNF34Q8IZ26 560 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 RPUSD2Q8IZ73 545 aaKnown RBP8.6□□□□□ -1.03
USP47-203ENST00000399455 CEP95Q96GE4 821 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 ACAP3Q96P50 834 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 PCIF1Q9H4Z3 704 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 FAM114A2Q9NRY5 505 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 APOEP02649 317 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 MMP1P03956 469 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 KPNA2P52292 529 aaKnown RBP8.6□□□□□ -1.03
USP47-203ENST00000399455 INHBEP58166 350 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 SATB1Q01826 763 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 MXD4Q14582 209 aaPredicted RBP8.6□□□□□ -1.03
USP47-203ENST00000399455 ME3Q16798 604 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 SLC10A5Q5PT55 438 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 ADGRF4Q8IZF3 695 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 KCTD6Q8NC69 237 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 BNIP3LO60238 219 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 CEP104O60308 925 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 QARSP47897 775 aaKnown RBP8.6□□□□□ -1.03
USP47-203ENST00000399455 CFAP221Q4G0U5 840 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 RWDD4Q6NW29 188 aaKnown RBP8.6□□□□□ -1.03
USP47-203ENST00000399455 GLB1LQ6UWU2 654 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 ARFGAP2Q8N6H7 521 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 DOLKQ9UPQ8 538 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 ATP11BQ9Y2G3 1177 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 KDM4FA0A1W2PPD8 638 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 LIFRP42702 1097 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 IQCB1Q15051 598 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 LDHDQ86WU2 507 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 TMEM47Q9BQJ4 181 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 IFIH1Q9BYX4 1025 aaKnown RBP8.59□□□□□ -1.03
USP47-203ENST00000399455 VPS37BQ9H9H4 285 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 CYP2D7A0A087X1C5 515 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 UBE2Q2LH0YL09 131 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 MCF2LO15068 1137 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 NKRFO15226 690 aaKnown RBP eCLIP8.59□□□□□ -1.03
USP47-203ENST00000399455 ITGA4P13612 1032 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 RCAN1P53805 252 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 EVCP57679 992 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 MTMR3Q13615 1198 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 SCARA5Q6ZMJ2 495 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 THNSL1Q8IYQ7 743 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 GSTA1P08263 222 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 GSTA2P09210 222 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 PFKFB1P16118 471 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 PAMP19021 973 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 TOGARAM2Q6ZUX3 1019 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 FAM84BQ96KN1 310 aaPredicted RBP8.59□□□□□ -1.03
USP47-203ENST00000399455 ANTXR1Q9H6X2 564 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 USP32Q8NFA0 1604 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 PI4K2BG5E9Z4 385 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 SKAP1Q86WV1 359 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 YME1L1Q96TA2 773 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 COLEC11Q9BWP8 271 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 TSSK1BQ9BXA7 367 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 SYNDIG1Q9H7V2 258 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 ZBTB12Q9Y330 459 aaPredicted RBP8.59□□□□□ -1.03
USP47-203ENST00000399455 KRT3P12035 628 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 ABCB4P21439 1286 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 AMPD2Q01433 879 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 GNASQ5JWF2 1037 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 CCNYQ8ND76 341 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 NLRC4Q9NPP4 1024 aa8.59□□□□□ -1.03
USP47-203ENST00000399455 GRIK1P39086 918 aa8.59□□□□□ -1.04
USP47-203ENST00000399455 STAT5BP51692 787 aa8.59□□□□□ -1.04
USP47-203ENST00000399455 POLR2FP61218 127 aaKnown RBP8.59□□□□□ -1.04
USP47-203ENST00000399455 XRRA1Q6P2D8 792 aa8.59□□□□□ -1.04
USP47-203ENST00000399455 ARHGEF18Q6ZSZ5 1173 aa8.59□□□□□ -1.04
USP47-203ENST00000399455 SAMD7Q7Z3H4 446 aa8.59□□□□□ -1.04
USP47-203ENST00000399455 IFT43Q96FT9 208 aa8.59□□□□□ -1.04
USP47-203ENST00000399455 CHMP6Q96FZ7 201 aa8.59□□□□□ -1.04
USP47-203ENST00000399455 STRBPQ96SI9 672 aaKnown RBP8.59□□□□□ -1.04
USP47-203ENST00000399455 DCP1AQ9NPI6 582 aaPredicted RBP8.59□□□□□ -1.04
USP47-203ENST00000399455 DAGLAQ9Y4D2 1042 aa8.59□□□□□ -1.04
USP47-203ENST00000399455 IPPQ9Y573 584 aa8.59□□□□□ -1.04
USP47-203ENST00000399455 IKBKBO14920 756 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 NOL3O60936 208 aaKnown RBP8.58□□□□□ -1.04
USP47-203ENST00000399455 AMHP03971 560 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 CMA1P23946 247 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 TRIM28Q13263 835 aaKnown RBP8.58□□□□□ -1.04
USP47-203ENST00000399455 ACCSLQ4AC99 568 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 RASGRP4Q8TDF6 673 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 SEPT8Q92599 483 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 ARFGAP3Q9NP61 516 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 STARD7Q9NQZ5 370 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 SUCLA2Q9P2R7 463 aaPredicted RBP8.58□□□□□ -1.04
USP47-203ENST00000399455 ESPNB1AK53 854 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 DYNC1I1O14576 645 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 GPR182O15218 404 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 ASAP2O43150 1006 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 TBXAS1P24557 533 aaPredicted RBP8.58□□□□□ -1.04
USP47-203ENST00000399455 ALDH1A3P47895 512 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 ALDH7A1P49419 539 aaKnown RBP8.58□□□□□ -1.04
USP47-203ENST00000399455 ASPHQ12797 758 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 HHATQ5VTY9 493 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 CDC42EP5Q6NZY7 148 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 SPATA31D1Q6ZQQ2 1576 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms