RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 CNOT6LQ96LI5 555 aaKnown RBP10.31□□□□□ -0.76
SMAD9-203ENST00000399275 WDR24Q96S15 920 aa10.31□□□□□ -0.76
SMAD9-203ENST00000399275 CCSER2Q9H7U1 834 aa10.31□□□□□ -0.76
SMAD9-203ENST00000399275 TRPC7Q9HCX4 862 aa10.31□□□□□ -0.76
SMAD9-203ENST00000399275 SLC40A1Q9NP59 571 aa10.31□□□□□ -0.76
SMAD9-203ENST00000399275 DISC1Q9NRI5 854 aa10.31□□□□□ -0.76
SMAD9-203ENST00000399275 ATP6V1HQ9UI12 483 aa10.31□□□□□ -0.76
SMAD9-203ENST00000399275 CLTCL1P53675 1640 aa10.31□□□□□ -0.76
SMAD9-203ENST00000399275 ADGRL3Q9HAR2 1447 aa10.31□□□□□ -0.76
SMAD9-203ENST00000399275 USP42Q9H9J4 1324 aaKnown RBP10.31□□□□□ -0.76
SMAD9-203ENST00000399275 B4DLN1 442 aa10.31□□□□□ -0.76
SMAD9-203ENST00000399275 RASA3Q14644 834 aa10.31□□□□□ -0.76
SMAD9-203ENST00000399275 NDUFA5Q16718 116 aa10.31□□□□□ -0.76
SMAD9-203ENST00000399275 TCP11X2Q5H9J9 407 aa10.31□□□□□ -0.76
SMAD9-203ENST00000399275 GALNT17Q6IS24 598 aa10.31□□□□□ -0.76
SMAD9-203ENST00000399275 TCAIMQ8N3R3 496 aa10.31□□□□□ -0.76
SMAD9-203ENST00000399275 CCDC90BQ9GZT6 254 aa10.31□□□□□ -0.76
SMAD9-203ENST00000399275 EPC1Q9H2F5 836 aa10.31□□□□□ -0.76
SMAD9-203ENST00000399275 SLC52A2Q9HAB3 445 aa10.31□□□□□ -0.76
SMAD9-203ENST00000399275 ARHGAP26Q9UNA1 814 aa10.31□□□□□ -0.76
SMAD9-203ENST00000399275 S100A5P33763 92 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 TNNI2P48788 182 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 KDM4CQ9H3R0 1056 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 NLRC4Q9NPP4 1024 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 ANKIB1Q9P2G1 1089 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 IGSF1Q8N6C5 1336 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 PRR23D1E9PI22 279 aaPredicted RBP10.3□□□□□ -0.76
SMAD9-203ENST00000399275 DNALI1O14645 258 aaPredicted RBP10.3□□□□□ -0.76
SMAD9-203ENST00000399275 DLGAP3O95886 979 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 PRR23D2P0DMB1 279 aaPredicted RBP10.3□□□□□ -0.76
SMAD9-203ENST00000399275 KIF22Q14807 665 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 TMEM110Q86TL2 294 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 TSPAN18Q96SJ8 248 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 PITPNM3Q9BZ71 974 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 MAST3O60307 1309 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 WDR19Q8NEZ3 1342 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 LRRC7Q96NW7 1537 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 SETBP1Q9Y6X0 1596 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 CIAO1O76071 339 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 RASSF7Q02833 373 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 PPP2R5CQ13362 524 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 HAUS3Q68CZ6 603 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 SDE2Q6IQ49 451 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 RBM43Q6ZSC3 357 aaKnown RBP10.3□□□□□ -0.76
SMAD9-203ENST00000399275 LUZP2Q86TE4 346 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 LPIN2Q92539 896 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 RNF26Q9BY78 433 aaPredicted RBP10.3□□□□□ -0.76
SMAD9-203ENST00000399275 LAD1O00515 517 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 GPC4O75487 556 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 ITGA6P23229 1130 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 ADARP55265 1226 aaKnown RBP10.3□□□□□ -0.76
SMAD9-203ENST00000399275 KRR1Q13601 381 aaKnown RBP10.3□□□□□ -0.76
SMAD9-203ENST00000399275 KRT31Q15323 416 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 C10orf76Q5T2E6 689 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 SPATA21Q7Z572 469 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 MB21D1Q8N884 522 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 ZNF594Q96JF6 807 aaPredicted RBP10.3□□□□□ -0.76
SMAD9-203ENST00000399275 PCDHA13Q9Y5I0 950 aa10.3□□□□□ -0.76
SMAD9-203ENST00000399275 ZFYVE16Q7Z3T8 1539 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 UBTFL6P0CB48 400 aaPredicted RBP10.29□□□□□ -0.76
SMAD9-203ENST00000399275 POTEIP0CG38 1075 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 UBE3CQ15386 1083 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 PPP4R3AQ6IN85 833 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 PAGE5Q96GU1 130 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 NLRP4Q96MN2 994 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 MRPL40Q9NQ50 206 aaKnown RBP10.29□□□□□ -0.76
SMAD9-203ENST00000399275 DENND2AQ9ULE3 1009 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 KLHL20Q9Y2M5 609 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 DDAH1O94760 285 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 PRLP01236 227 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 VSNL1P62760 191 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 DCTN2Q13561 401 aaKnown RBP10.29□□□□□ -0.76
SMAD9-203ENST00000399275 KCTD21Q4G0X4 260 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 MCM9Q9NXL9 1143 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 AGTPBP1Q9UPW5 1226 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 ARPC4-TTLL3A0A0A6YYG9 625 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 ATP6V1E1P36543 226 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 UBE3AQ05086 875 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 EHHADHQ08426 723 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 PTGDRQ13258 359 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 KPNB1Q14974 876 aaKnown RBP10.29□□□□□ -0.76
SMAD9-203ENST00000399275 ZCWPW2Q504Y3 356 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 RARS2Q5T160 578 aaKnown RBP10.29□□□□□ -0.76
SMAD9-203ENST00000399275 PPP4R4Q6NUP7 873 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 IFNL3Q8IZI9 196 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 MYOCDQ8IZQ8 938 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 BLIDQ8IZY5 108 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 SPATA5Q8NB90 893 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 PARD3BQ8TEW8 1205 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 SGSM3Q96HU1 749 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 B3GALT6Q96L58 329 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 CCT7Q99832 543 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 NOD2Q9HC29 1040 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 ABCC12Q96J65 1359 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 PGRMC1O00264 195 aaKnown RBP10.29□□□□□ -0.76
SMAD9-203ENST00000399275 SH2B2O14492 632 aaPredicted RBP10.29□□□□□ -0.76
SMAD9-203ENST00000399275 RASSF9O75901 435 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 ACADSP16219 412 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 TXKP42681 527 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 PPARAQ07869 468 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms