RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 PCDHB13Q9Y5F0 798 aa19.49■□□□□ 0.71
HLA-DQB1-204ENST00000399084 ABL1P00519 1130 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 AFPP02771 609 aaKnown RBP19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 CBX1P83916 185 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 CYP4A11Q02928 519 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 PCNX4Q63HM2 1172 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 TBC1D5Q92609 795 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 DYDC2Q96IM9 177 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 TEPSINQ96N21 525 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 ALS2CR12Q96Q35 445 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 TIPINQ9BVW5 301 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 FGFBP2Q9BYJ0 223 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 PDGFDQ9GZP0 370 aaPredicted RBP19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 ZNF446Q9NWS9 450 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 RGL1Q9NZL6 768 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 ATP8B3O60423 1300 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 EPHB6O15197 1021 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 NOL4O94818 638 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 LYPLA2O95372 231 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 MAGEA1P43355 309 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 ITIH3Q06033 890 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 GABPB1Q06547 395 aaPredicted RBP19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 FER1L6Q2WGJ9 1857 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 DCAF15Q66K64 600 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 RUSC1Q9BVN2 902 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 LACRTQ9GZZ8 138 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 SLC38A10Q9HBR0 1119 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 TBC1D22BQ9NU19 505 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 TSKSQ9UJT2 592 aa19.48■□□□□ 0.71
HLA-DQB1-204ENST00000399084 ZNF536O15090 1300 aa19.47■□□□□ 0.71
HLA-DQB1-204ENST00000399084 NKRFO15226 690 aaKnown RBP eCLIP19.47■□□□□ 0.71
HLA-DQB1-204ENST00000399084 GCNT3O95395 438 aa19.47■□□□□ 0.71
HLA-DQB1-204ENST00000399084 NR3C1P04150 777 aa19.47■□□□□ 0.71
HLA-DQB1-204ENST00000399084 RAD51AP2Q09MP3 1159 aa19.47■□□□□ 0.71
HLA-DQB1-204ENST00000399084 HGSNATQ68CP4 663 aa19.47■□□□□ 0.71
HLA-DQB1-204ENST00000399084 CC2D1AQ6P1N0 951 aaPredicted RBP19.47■□□□□ 0.71
HLA-DQB1-204ENST00000399084 LSM14BQ9BX40 385 aaKnown RBP19.47■□□□□ 0.71
HLA-DQB1-204ENST00000399084 DBR1Q9UK59 544 aaKnown RBP19.47■□□□□ 0.71
HLA-DQB1-204ENST00000399084 SPDYE4A6NLX3 237 aa19.46■□□□□ 0.71
HLA-DQB1-204ENST00000399084 P4HBP07237 508 aaKnown RBP19.46■□□□□ 0.71
HLA-DQB1-204ENST00000399084 INPP5BP32019 993 aa19.46■□□□□ 0.71
HLA-DQB1-204ENST00000399084 HOXD13P35453 343 aa19.46■□□□□ 0.71
HLA-DQB1-204ENST00000399084 PSMC2P35998 433 aaKnown RBP19.46■□□□□ 0.71
HLA-DQB1-204ENST00000399084 CASP5P51878 434 aa19.46■□□□□ 0.71
HLA-DQB1-204ENST00000399084 CACNB1Q02641 598 aaPredicted RBP19.46■□□□□ 0.71
HLA-DQB1-204ENST00000399084 CTTNQ14247 550 aaKnown RBP19.46■□□□□ 0.71
HLA-DQB1-204ENST00000399084 HS2ST1Q7LGA3 356 aa19.46■□□□□ 0.71
HLA-DQB1-204ENST00000399084 MYCT1Q8N699 235 aa19.46■□□□□ 0.71
HLA-DQB1-204ENST00000399084 SLC17A8Q8NDX2 589 aa19.46■□□□□ 0.71
HLA-DQB1-204ENST00000399084 SMCR8Q8TEV9 937 aaPredicted RBP19.46■□□□□ 0.71
HLA-DQB1-204ENST00000399084 ZSWIM4Q9H7M6 989 aa19.46■□□□□ 0.71
HLA-DQB1-204ENST00000399084 FBXO28Q9NVF7 368 aa19.46■□□□□ 0.71
HLA-DQB1-204ENST00000399084 UBIAD1Q9Y5Z9 338 aa19.46■□□□□ 0.71
HLA-DQB1-204ENST00000399084 FHOD1Q9Y613 1164 aa19.46■□□□□ 0.71
HLA-DQB1-204ENST00000399084 ZNF263O14978 683 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 ZBED4O75132 1171 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 PNMA6AP0CW24 399 aaPredicted RBP19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 POLR2FP61218 127 aaKnown RBP19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 SNRPFP62306 86 aaKnown RBP19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 ZYXQ15942 572 aaKnown RBP19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 GBP6Q6ZN66 633 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 ZNF720Q7Z2F6 126 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 SLC9A9Q8IVB4 645 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 CLEC4DQ8WXI8 215 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 RUBCNQ92622 972 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 UIMC1Q96RL1 719 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 UNC45AQ9H3U1 944 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 AS3MTQ9HBK9 375 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 JADE2Q9NQC1 790 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 RNF14Q9UBS8 474 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 PUF60Q9UHX1 559 aaKnown RBP19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 PRPF6O94906 941 aaKnown RBP19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 MYBP10242 640 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 ARP10275 920 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 ZSCAN20P17040 1043 aaPredicted RBP19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 TCP1P17987 556 aaKnown RBP19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 CYP27A1Q02318 531 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 EXOC3L4Q17RC7 722 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 WDR93Q6P2C0 686 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 MTFR1LQ9H019 292 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 GANQ9H2C0 597 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 TRIM10Q9UDY6 481 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 PPP1R9AQ9ULJ8 1098 aa19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 CTDP1Q9Y5B0 961 aaPredicted RBP19.45■□□□□ 0.7
HLA-DQB1-204ENST00000399084 TARSL2A2RTX5 802 aaKnown RBP19.44■□□□□ 0.7
HLA-DQB1-204ENST00000399084 ARHGEF35A5YM69 484 aa19.44■□□□□ 0.7
HLA-DQB1-204ENST00000399084 RCCD1A6NED2 376 aa19.44■□□□□ 0.7
HLA-DQB1-204ENST00000399084 BTNL10A8MVZ5 291 aa19.44■□□□□ 0.7
HLA-DQB1-204ENST00000399084 MAFGO15525 162 aa19.44■□□□□ 0.7
HLA-DQB1-204ENST00000399084 GFPT2O94808 682 aa19.44■□□□□ 0.7
HLA-DQB1-204ENST00000399084 PPP2R5AQ15172 486 aa19.44■□□□□ 0.7
HLA-DQB1-204ENST00000399084 SLC18A3Q16572 532 aa19.44■□□□□ 0.7
HLA-DQB1-204ENST00000399084 FAM178BQ8IXR5 827 aa19.44■□□□□ 0.7
HLA-DQB1-204ENST00000399084 RDM1Q8NG50 284 aa19.44■□□□□ 0.7
HLA-DQB1-204ENST00000399084 AGBL1Q96MI9 1066 aa19.44■□□□□ 0.7
HLA-DQB1-204ENST00000399084 NOX5Q96PH1 765 aa19.44■□□□□ 0.7
HLA-DQB1-204ENST00000399084 GLIS2Q9BZE0 524 aaPredicted RBP19.44■□□□□ 0.7
HLA-DQB1-204ENST00000399084 KCNH7Q9NS40 1196 aa19.44■□□□□ 0.7
HLA-DQB1-204ENST00000399084 CD2APQ9Y5K6 639 aa19.44■□□□□ 0.7
HLA-DQB1-204ENST00000399084 ASTN1O14525 1302 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms