RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 NUP58Q9BVL2 599 aa11.1□□□□□ -0.63
HMGCLL1-205ENST00000398661 KDM4CQ9H3R0 1056 aa11.1□□□□□ -0.63
HMGCLL1-205ENST00000398661 RBM12Q9NTZ6 932 aaKnown RBP11.1□□□□□ -0.63
HMGCLL1-205ENST00000398661 LRWD1Q9UFC0 647 aa11.1□□□□□ -0.63
HMGCLL1-205ENST00000398661 H7C1D1 291 aa11.1□□□□□ -0.63
HMGCLL1-205ENST00000398661 AP1G2O75843 785 aa11.1□□□□□ -0.63
HMGCLL1-205ENST00000398661 GLI1P08151 1106 aa11.1□□□□□ -0.63
HMGCLL1-205ENST00000398661 CXCR5P32302 372 aa11.1□□□□□ -0.63
HMGCLL1-205ENST00000398661 TYW1BQ6NUM6 668 aa11.1□□□□□ -0.63
HMGCLL1-205ENST00000398661 CRELD2Q6UXH1 353 aaPredicted RBP11.1□□□□□ -0.63
HMGCLL1-205ENST00000398661 NEDD1Q8NHV4 660 aa11.1□□□□□ -0.63
HMGCLL1-205ENST00000398661 RASGRP4Q8TDF6 673 aa11.1□□□□□ -0.63
HMGCLL1-205ENST00000398661 STAMQ92783 540 aa11.1□□□□□ -0.63
HMGCLL1-205ENST00000398661 SYMPKQ92797 1274 aaKnown RBP11.1□□□□□ -0.63
HMGCLL1-205ENST00000398661 EPB41L5Q9HCM4 733 aa11.1□□□□□ -0.63
HMGCLL1-205ENST00000398661 MAD2L2Q9UI95 211 aa11.1□□□□□ -0.63
HMGCLL1-205ENST00000398661 PLAAQ9Y263 795 aa11.1□□□□□ -0.63
HMGCLL1-205ENST00000398661 MYO3BQ8WXR4 1341 aa11.1□□□□□ -0.63
HMGCLL1-205ENST00000398661 GOLGA6L10A6NI86 522 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 ENO4A6NNW6 628 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 PES1O00541 588 aaKnown RBP11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 USO1O60763 962 aaKnown RBP11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 MOCS3O95396 460 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 CDC37Q16543 378 aaPredicted RBP11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 CCDC96Q2M329 555 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 EARS2Q5JPH6 523 aaKnown RBP11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 HIBCHQ6NVY1 386 aaPredicted RBP11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 MIS18BP1Q6P0N0 1132 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 ZNF507Q8TCN5 953 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 TEPSINQ96N21 525 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 PSMB7Q99436 277 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 MLXIPQ9HAP2 919 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 CPSF2Q9P2I0 782 aaKnown RBP11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 SLC12A6Q9UHW9 1150 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 TIAM2Q8IVF5 1701 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 SMCHD1A6NHR9 2005 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 ESYT3A0FGR9 886 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 SMNDC1O75940 238 aaKnown RBP eCLIP11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 HEXIM1O94992 359 aaKnown RBP11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 ANP32DO95626 131 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 PECAM1P16284 738 aaPredicted RBP11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 GUCY2DQ02846 1103 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 FUT2Q10981 343 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 PPP1R7Q15435 360 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 PKN1Q16512 942 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 ABCB5Q2M3G0 1257 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 IRF2BP1Q8IU81 584 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 SPDYE1Q8NFV5 336 aaPredicted RBP11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 CNKSR2Q8WXI2 1034 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 ZBED3Q96IU2 234 aaPredicted RBP11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 BLZF1Q9H2G9 400 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 SH2D4AQ9H788 454 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 AGPAT5Q9NUQ2 364 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 SH3BP1Q9Y3L3 701 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 ROBO3Q96MS0 1386 aa11.09□□□□□ -0.63
HMGCLL1-205ENST00000398661 SBF1O95248 1867 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 ZSCAN5CA6NGD5 496 aaPredicted RBP11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 KLRF2D3W0D1 207 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 WNT7AO00755 349 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 ZNF280AP59817 542 aaPredicted RBP11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 PPARDQ03181 441 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 TRAF1Q13077 416 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 SLMAPQ14BN4 828 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 SPA17Q15506 151 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 ARMC9Q7Z3E5 817 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 GPC2Q8N158 579 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 WHAMMQ8TF30 809 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 FAM151AQ8WW52 585 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 ITFG2Q969R8 447 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 MRIQ9BWK5 157 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 CABP5Q9NP86 173 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 LTBP3Q9NS15 1303 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 SIPA1L1O43166 1804 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 ZNF263O14978 683 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 PEX10O60683 326 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 TMOD1P28289 359 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 RIPK1Q13546 671 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 GKAP1Q5VSY0 366 aaPredicted RBP11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 LRIG3Q6UXM1 1119 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 CCHCR1Q8TD31 782 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 CASKIN2Q8WXE0 1202 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 RAPGEF5Q92565 580 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 TTYH3Q9C0H2 523 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 PLCB1Q9NQ66 1216 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 LAMB1P07942 1786 aa11.08□□□□□ -0.64
HMGCLL1-205ENST00000398661 GCOM1H8Y6P7 765 aaPredicted RBP11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 NCK2O43639 380 aa11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 MYZAPP0CAP1 466 aa11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 IFNAR1P17181 557 aa11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 HSPA9P38646 679 aaKnown RBP11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 ZBED6P86452 979 aa11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 ZNF658Q5TYW1 1059 aaPredicted RBP11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 TMTC3Q6ZXV5 915 aa11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 ZNF570Q96NI8 536 aa11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 ALS2CR12Q96Q35 445 aa11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 DHX36Q9H2U1 1008 aaKnown RBP11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 CORO1CQ9ULV4 474 aaPredicted RBP11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 TRIM75PA6NK02 468 aa11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 BACH1O14867 736 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms