RNA–Protein interactions for RNA: ENST00000397041.7

ATP2A3-205, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A3, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-205ENST00000397041 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.1■□□□□ 0.334e-7■■□□□ 13.3
ATP2A3-205ENST00000397041 DMGDHQ9UI17 866 aaKnown RBP17.1■□□□□ 0.33
ATP2A3-205ENST00000397041 BCS1LQ9Y276 419 aa17.1■□□□□ 0.33
ATP2A3-205ENST00000397041 NPHP4O75161 1426 aaPredicted RBP17.1■□□□□ 0.33
ATP2A3-205ENST00000397041 H0Y3Z8 333 aa17.1■□□□□ 0.33
ATP2A3-205ENST00000397041 GAP43P17677 238 aa17.1■□□□□ 0.33
ATP2A3-205ENST00000397041 CORO7P57737 925 aa17.1■□□□□ 0.33
ATP2A3-205ENST00000397041 EZH2Q15910 746 aaKnown RBP17.1■□□□□ 0.33
ATP2A3-205ENST00000397041 ANKRD35Q8N283 1001 aa17.1■□□□□ 0.33
ATP2A3-205ENST00000397041 ZNF473Q8WTR7 871 aaKnown RBP17.1■□□□□ 0.33
ATP2A3-205ENST00000397041 HNRNPDLO14979 420 aaKnown RBP17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 LSP1P33241 339 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 LIG4P49917 911 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 MYO1EQ12965 1108 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 TTBK2Q6IQ55 1244 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 SLC24A3Q9HC58 644 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 TCP10L2B9ZVM9 353 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 ACTN1P12814 892 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 MXI1P50539 228 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 SPATA24Q86W54 205 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 PIK3C2BO00750 1634 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 NPHP3-ACAD11A0A0J9YXS1 232 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 A0A0U1RQJ8 604 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 FAM196BA6NMK8 535 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 PHF20L1A8MW92 1017 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 ADCY2Q08462 1091 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 CDC37Q16543 378 aaPredicted RBP17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 SEPT14Q6ZU15 432 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 SMIM5Q71RC9 77 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 GIMAP8Q8ND71 665 aaPredicted RBP17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 ZNF18P17022 549 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 CACNB3P54284 484 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 RCN2Q14257 317 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 MAP7D1Q3KQU3 841 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 LGSNQ5TDP6 509 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 HEMGNQ9BXL5 484 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 EPN3Q9H201 632 aa17.09■□□□□ 0.33
ATP2A3-205ENST00000397041 SGK1O00141 431 aa17.08■□□□□ 0.33
ATP2A3-205ENST00000397041 SMIM24O75264 130 aa17.08■□□□□ 0.33
ATP2A3-205ENST00000397041 MKRN4PQ13434 485 aaPredicted RBP17.08■□□□□ 0.33
ATP2A3-205ENST00000397041 NTRK3Q16288 839 aa17.08■□□□□ 0.33
ATP2A3-205ENST00000397041 FOXR1Q6PIV2 292 aa17.08■□□□□ 0.33
ATP2A3-205ENST00000397041 PPP4R3CPQ6ZMV5 832 aa17.08■□□□□ 0.33
ATP2A3-205ENST00000397041 ZNF354CQ86Y25 554 aa17.08■□□□□ 0.33
ATP2A3-205ENST00000397041 DEPDC5O75140 1603 aa17.08■□□□□ 0.33
ATP2A3-205ENST00000397041 EXOC1LA0A1B0GW35 172 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 USP17L10C9JJH3 530 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 CA4P22748 312 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 PMS2P54278 862 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 TRAPPC11Q7Z392 1133 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 SRRM1Q8IYB3 904 aaKnown RBP17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 LRRD1A4D1F6 860 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 MYMKA6NI61 221 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 TTI1O43156 1089 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 HSPA6P17066 643 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 DYNLT1P63172 113 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 CAPN6Q9Y6Q1 641 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 hCG_1984214I3L0E3 225 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 PHBP35232 272 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 YWHAGP61981 247 aaKnown RBP eCLIP17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 CCDC93Q567U6 631 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 RASIP1Q5U651 963 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 PHLDB3Q6NSJ2 640 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 SCYL2Q6P3W7 929 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 ZNF713Q8N859 430 aaPredicted RBP17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 RAB3IL1Q8TBN0 382 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 KCNV2Q8TDN2 545 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 ARL8AQ96BM9 186 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 CCDC17Q96LX7 622 aa17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 MRPL11Q9Y3B7 192 aaKnown RBP17.08■□□□□ 0.32
ATP2A3-205ENST00000397041 ORC4O43929 436 aa17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 HMGB2P26583 209 aaKnown RBP17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 CHMP6Q96FZ7 201 aa17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 SPATA31A3Q5VYP0 1347 aa17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 TRIM37O94972 964 aa17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 GCLMP48507 274 aa17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 PARP9Q8IXQ6 854 aa17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 RNPC3Q96LT9 517 aaKnown RBP17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 NACC1Q96RE7 527 aa17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 TRIM51Q9BSJ1 452 aa17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 PITPNM3Q9BZ71 974 aa17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 VCX3BQ9H321 246 aa17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 TMOD4Q9NZQ9 345 aa17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 ANKFY1Q9P2R3 1169 aa17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 LCMT1Q9UIC8 334 aa17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 INTUQ9ULD6 942 aa17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 RAD51CO43502 376 aa17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 TRIM49P0CI25 452 aa17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 TRIM49CP0CI26 452 aa17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 KLRC1P26715 233 aa17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 DRAP1Q14919 205 aaPredicted RBP17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 DEPTORQ8TB45 409 aa17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 HAUS2Q9NVX0 235 aa17.07■□□□□ 0.32
ATP2A3-205ENST00000397041 GRID2IPA4D2P6 1211 aa17.06■□□□□ 0.32
ATP2A3-205ENST00000397041 DMP1Q13316 513 aaPredicted RBP17.06■□□□□ 0.32
ATP2A3-205ENST00000397041 SLC18A3Q16572 532 aa17.06■□□□□ 0.32
ATP2A3-205ENST00000397041 KNOP1Q1ED39 458 aaKnown RBP17.06■□□□□ 0.32
ATP2A3-205ENST00000397041 PLA2G12BQ9BX93 195 aa17.06■□□□□ 0.32
ATP2A3-205ENST00000397041 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.06■□□□□ 0.32
ATP2A3-205ENST00000397041 UBAP1LF5GYI3 381 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms