RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 UAP1Q16222 522 aaPredicted RBP14.59□□□□□ -0.07
TRIM40-207ENST00000396581 RTKN2Q8IZC4 609 aa14.59□□□□□ -0.07
TRIM40-207ENST00000396581 MYCBPQ99417 103 aaPredicted RBP14.59□□□□□ -0.07
TRIM40-207ENST00000396581 PACSIN1Q9BY11 444 aa14.59□□□□□ -0.07
TRIM40-207ENST00000396581 ADAMTS1Q9UHI8 967 aa14.59□□□□□ -0.07
TRIM40-207ENST00000396581 NENFQ9UMX5 172 aa14.59□□□□□ -0.07
TRIM40-207ENST00000396581 PACSIN2Q9UNF0 486 aaPredicted RBP14.59□□□□□ -0.07
TRIM40-207ENST00000396581 MTMR7Q9Y216 660 aa14.59□□□□□ -0.07
TRIM40-207ENST00000396581 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.59□□□□□ -0.07
TRIM40-207ENST00000396581 F8W031 263 aaPredicted RBP14.58□□□□□ -0.08
TRIM40-207ENST00000396581 SLC26A4O43511 780 aa14.58□□□□□ -0.08
TRIM40-207ENST00000396581 CLK2P49760 499 aaKnown RBP14.58□□□□□ -0.08
TRIM40-207ENST00000396581 ADCY7P51828 1080 aa14.58□□□□□ -0.08
TRIM40-207ENST00000396581 BIRC3Q13489 604 aa14.58□□□□□ -0.08
TRIM40-207ENST00000396581 RPS6KA1Q15418 735 aa14.58□□□□□ -0.08
TRIM40-207ENST00000396581 AOC3Q16853 763 aa14.58□□□□□ -0.08
TRIM40-207ENST00000396581 EDRF1Q3B7T1 1238 aa14.58□□□□□ -0.08
TRIM40-207ENST00000396581 CEP85LQ5SZL2 805 aa14.58□□□□□ -0.08
TRIM40-207ENST00000396581 PPP1R18Q6NYC8 613 aa14.58□□□□□ -0.08
TRIM40-207ENST00000396581 IRF2BP2Q7Z5L9 587 aa14.58□□□□□ -0.08
TRIM40-207ENST00000396581 SEC14L1Q92503 715 aa14.58□□□□□ -0.08
TRIM40-207ENST00000396581 TEKT1Q969V4 418 aa14.58□□□□□ -0.08
TRIM40-207ENST00000396581 LRRC45Q96CN5 670 aa14.58□□□□□ -0.08
TRIM40-207ENST00000396581 PSMD1Q99460 953 aa14.58□□□□□ -0.08
TRIM40-207ENST00000396581 PANK4Q9NVE7 773 aa14.58□□□□□ -0.08
TRIM40-207ENST00000396581 PLIN4Q96Q06 1357 aa14.58□□□□□ -0.08
TRIM40-207ENST00000396581 CDK5RAP2Q96SN8 1893 aa14.58□□□□□ -0.08
TRIM40-207ENST00000396581 FRMD3A2A2Y4 597 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 MYO1FO00160 1098 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 RASSF9O75901 435 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 PAEPP09466 180 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 ERCC3P19447 782 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 ANXA13P27216 316 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 SMTNP53814 917 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 SEC24CP53992 1094 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 TGFB2P61812 414 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 HDLBPQ00341 1268 aaKnown RBP14.57□□□□□ -0.08
TRIM40-207ENST00000396581 RAPGEF1Q13905 1077 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 ASIC2Q16515 512 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 APOBEC3HQ6NTF7 200 aaKnown RBP14.57□□□□□ -0.08
TRIM40-207ENST00000396581 PPP4R3CPQ6ZMV5 832 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 RPAINQ86UA6 219 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 TAF4BQ92750 862 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 HAS1Q92839 578 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 CEP95Q96GE4 821 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 MTFR1LQ9H019 292 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 BZW2Q9Y6E2 419 aaKnown RBP14.57□□□□□ -0.08
TRIM40-207ENST00000396581 KIF13BQ9NQT8 1826 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 KDM3AQ9Y4C1 1321 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 C5orf60A6NFR6 353 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 CCDC188H7C350 402 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 ZBTB7AO95365 584 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 SNHG28P0DPA3 235 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 PDHBP11177 359 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 PRKCIP41743 596 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 MNAT1P51948 309 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 ZNF844Q08AG5 666 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 IFI16Q16666 785 aaKnown RBP14.57□□□□□ -0.08
TRIM40-207ENST00000396581 AGBL2Q5U5Z8 902 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 SLFN11Q7Z7L1 901 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 RASGEF1CQ8N431 466 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 FAM133AQ8N9E0 248 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 ZDHHC15Q96MV8 337 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 FGFBP2Q9BYJ0 223 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 NT5C3AQ9H0P0 336 aa14.57□□□□□ -0.08
TRIM40-207ENST00000396581 SAP30BPQ9UHR5 308 aaKnown RBP14.57□□□□□ -0.08
TRIM40-207ENST00000396581 GCOM1H8Y6P7 765 aaPredicted RBP14.56□□□□□ -0.08
TRIM40-207ENST00000396581 TRAPPC3O43617 180 aa14.56□□□□□ -0.08
TRIM40-207ENST00000396581 MYZAPP0CAP1 466 aa14.56□□□□□ -0.08
TRIM40-207ENST00000396581 SCNN1DP51172 638 aa14.56□□□□□ -0.08
TRIM40-207ENST00000396581 RUFY4Q6ZNE9 571 aa14.56□□□□□ -0.08
TRIM40-207ENST00000396581 MAATS1Q7Z4T9 603 aa14.56□□□□□ -0.08
TRIM40-207ENST00000396581 KLHL7Q8IXQ5 586 aa14.56□□□□□ -0.08
TRIM40-207ENST00000396581 SCFD1Q8WVM8 642 aa14.56□□□□□ -0.08
TRIM40-207ENST00000396581 CYFIP2Q96F07 1278 aa14.56□□□□□ -0.08
TRIM40-207ENST00000396581 STXBP5LQ9Y2K9 1186 aa14.56□□□□□ -0.08
TRIM40-207ENST00000396581 SCN9AQ15858 1988 aa14.56□□□□□ -0.08
TRIM40-207ENST00000396581 A0A0A6YYK5 440 aaPredicted RBP14.56□□□□□ -0.08
TRIM40-207ENST00000396581 GOLGA6L10A6NI86 522 aa14.56□□□□□ -0.08
TRIM40-207ENST00000396581 USP17L5A8MUK1 530 aa14.56□□□□□ -0.08
TRIM40-207ENST00000396581 KCNK3O14649 394 aa14.56□□□□□ -0.08
TRIM40-207ENST00000396581 PPIP5K2O43314 1243 aa14.56□□□□□ -0.08
TRIM40-207ENST00000396581 PTK2Q05397 1052 aa14.56□□□□□ -0.08
TRIM40-207ENST00000396581 ASPRV1Q53RT3 343 aa14.56□□□□□ -0.08
TRIM40-207ENST00000396581 ZNF571Q7Z3V5 609 aaPredicted RBP14.56□□□□□ -0.08
TRIM40-207ENST00000396581 CCDC65Q8IXS2 484 aa14.56□□□□□ -0.08
TRIM40-207ENST00000396581 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.56□□□□□ -0.08
TRIM40-207ENST00000396581 UBA5Q9GZZ9 404 aa14.56□□□□□ -0.08
TRIM40-207ENST00000396581 ACTR5Q9H9F9 607 aaPredicted RBP14.56□□□□□ -0.08
TRIM40-207ENST00000396581 VAT1LQ9HCJ6 419 aa14.56□□□□□ -0.08
TRIM40-207ENST00000396581 FBXL5Q9UKA1 691 aa14.56□□□□□ -0.08
TRIM40-207ENST00000396581 GMNCA6NCL1 334 aa14.55□□□□□ -0.08
TRIM40-207ENST00000396581 SART1O43290 800 aaKnown RBP14.55□□□□□ -0.08
TRIM40-207ENST00000396581 GCFC2P16383 781 aaKnown RBP14.55□□□□□ -0.08
TRIM40-207ENST00000396581 CRKP46108 304 aa14.55□□□□□ -0.08
TRIM40-207ENST00000396581 KCNH2Q12809 1159 aa14.55□□□□□ -0.08
TRIM40-207ENST00000396581 MTMR3Q13615 1198 aa14.55□□□□□ -0.08
TRIM40-207ENST00000396581 CDC42EP5Q6NZY7 148 aa14.55□□□□□ -0.08
TRIM40-207ENST00000396581 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.55□□□□□ -0.08
TRIM40-207ENST00000396581 TACO1Q9BSH4 297 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms