RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 TACC3Q9Y6A5 838 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 COL4A1P02462 1669 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 ARAP2Q8WZ64 1704 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 BTAF1O14981 1849 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 TRIM43BA6NCK2 446 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 SNAP23O00161 211 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 TEX33O43247 280 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 CYP19A1P11511 503 aaPredicted RBP9.13□□□□□ -0.95
NDE1-202ENST00000396355 ITGA6P23229 1130 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 LBX1P52954 281 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 KIAA0753Q2KHM9 967 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 DNAJC14Q6Y2X3 702 aaPredicted RBP9.13□□□□□ -0.95
NDE1-202ENST00000396355 ANKRD23Q86SG2 305 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 GRAMD1CQ8IYS0 662 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 DOLKQ9UPQ8 538 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 GON4LQ3T8J9 2241 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 MX2P20592 715 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 STAT6P42226 847 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 KIF23Q02241 960 aaPredicted RBP9.13□□□□□ -0.95
NDE1-202ENST00000396355 LDHAL6AQ6ZMR3 332 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 NLRP10Q86W26 655 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 NIM1KQ8IY84 436 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 ABHD8Q96I13 439 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 TTC1Q99614 292 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 TMEM88BA6NKF7 163 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 IPO5O00410 1097 aaKnown RBP9.12□□□□□ -0.95
NDE1-202ENST00000396355 MAP3K7O43318 606 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 NOL3O60936 208 aaKnown RBP9.12□□□□□ -0.95
NDE1-202ENST00000396355 CDC27P30260 824 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 ADD2P35612 726 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 TNNC1P63316 161 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 IFIT5Q13325 482 aaKnown RBP9.12□□□□□ -0.95
NDE1-202ENST00000396355 PPP4R3AQ6IN85 833 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 PDCD7Q8N8D1 485 aaKnown RBP9.12□□□□□ -0.95
NDE1-202ENST00000396355 HELBQ8NG08 1087 aaPredicted RBP9.12□□□□□ -0.95
NDE1-202ENST00000396355 CTAGE1Q96RT6 745 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 POLR3EQ9NVU0 708 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 KCNH3Q9ULD8 1083 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 TDRKHQ9Y2W6 561 aaKnown RBP9.12□□□□□ -0.95
NDE1-202ENST00000396355 CCT8L1PA6NM43 557 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 STX2P32856 288 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 TTLL12Q14166 644 aaPredicted RBP9.12□□□□□ -0.95
NDE1-202ENST00000396355 PSMD6Q15008 389 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 TYW1BQ6NUM6 668 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 RAD9BQ6WBX8 426 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 OR8K1Q8NGG5 319 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 RPGRIP1Q96KN7 1286 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 ATP6V1G3Q96LB4 118 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 VIPAS39Q9H9C1 493 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 ARHGEF38Q9NXL2 777 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 EHD2Q9NZN4 543 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 CTTNBP2NLQ9P2B4 639 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 SUCLA2Q9P2R7 463 aaPredicted RBP9.12□□□□□ -0.95
NDE1-202ENST00000396355 TRMT112Q9UI30 125 aaKnown RBP9.12□□□□□ -0.95
NDE1-202ENST00000396355 TSKSQ9UJT2 592 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 CTNND2Q9UQB3 1225 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 PPIP5K2O43314 1243 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 CCNFP41002 786 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 ECE1P42892 770 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 PHKA1P46020 1223 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 GCLCP48506 637 aaPredicted RBP9.12□□□□□ -0.95
NDE1-202ENST00000396355 CACNA2D1P54289 1103 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 IFI16Q16666 785 aaKnown RBP9.12□□□□□ -0.95
NDE1-202ENST00000396355 CFAP221Q4G0U5 840 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 ST13P4Q8IZP2 240 aaPredicted RBP9.12□□□□□ -0.95
NDE1-202ENST00000396355 NCOA7Q8NI08 942 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 UIMC1Q96RL1 719 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 IWS1Q96ST2 819 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 UBE2OQ9C0C9 1292 aaKnown RBP9.12□□□□□ -0.95
NDE1-202ENST00000396355 HSD3B7Q9H2F3 369 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 DMGDHQ9UI17 866 aaKnown RBP9.12□□□□□ -0.95
NDE1-202ENST00000396355 IKBKGQ9Y6K9 419 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 MAP3K15Q6ZN16 1313 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 UBN2Q6ZU65 1347 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 RREB1Q92766 1687 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 DNM1LO00429 736 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 EPHX2P34913 555 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 PRELPP51888 382 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 DRP2Q13474 957 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 SLC4A8Q2Y0W8 1093 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 SLC9C2Q5TAH2 1124 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 INTS5Q6P9B9 1019 aaKnown RBP9.12□□□□□ -0.95
NDE1-202ENST00000396355 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.12□□□□□ -0.95
NDE1-202ENST00000396355 KRI1Q8N9T8 703 aaKnown RBP9.12□□□□□ -0.95
NDE1-202ENST00000396355 PHKBQ93100 1093 aa9.12□□□□□ -0.95
NDE1-202ENST00000396355 A0A1W2PQ27 194 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 A0A1W2PQ64 194 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 A0A1W2PQD8 194 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 TCRBV5S4A2TA0A5A2 114 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 ZNF213O14771 459 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 MARCH6O60337 910 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 RANBP6O60518 1105 aaKnown RBP9.11□□□□□ -0.95
NDE1-202ENST00000396355 FESP07332 822 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 PSMD7P51665 324 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 CCR3P51677 355 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 CTSWP56202 376 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 KCNJ2P63252 427 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 NCAPHQ15003 741 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 PRR5LQ6MZQ0 368 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 ZNF280DQ6N043 979 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms