RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 NLGN2Q8NFZ4 835 aa15.39■□□□□ 0.05
CCHCR1-203ENST00000396268 CAVIN3Q969G5 261 aa15.39■□□□□ 0.05
CCHCR1-203ENST00000396268 DNAJC19Q96DA6 116 aa15.39■□□□□ 0.05
CCHCR1-203ENST00000396268 KIAA1024Q9UPX6 916 aa15.39■□□□□ 0.05
CCHCR1-203ENST00000396268 POLD1P28340 1107 aa15.39■□□□□ 0.05
CCHCR1-203ENST00000396268 SMARCA1P28370 1054 aa15.39■□□□□ 0.05
CCHCR1-203ENST00000396268 PAK2Q13177 524 aa15.39■□□□□ 0.05
CCHCR1-203ENST00000396268 TRADDQ15628 312 aa15.39■□□□□ 0.05
CCHCR1-203ENST00000396268 TMEM119Q4V9L6 283 aa15.39■□□□□ 0.05
CCHCR1-203ENST00000396268 SUPT20HQ8NEM7 779 aa15.39■□□□□ 0.05
CCHCR1-203ENST00000396268 UPF1Q92900 1129 aaKnown RBP eCLIP15.39■□□□□ 0.05
CCHCR1-203ENST00000396268 PSMD1Q99460 953 aa15.39■□□□□ 0.05
CCHCR1-203ENST00000396268 NUCKS1Q9H1E3 243 aaKnown RBP15.39■□□□□ 0.05
CCHCR1-203ENST00000396268 BCS1LQ9Y276 419 aa15.39■□□□□ 0.05
CCHCR1-203ENST00000396268 MPHOSPH10O00566 681 aaKnown RBP15.38■□□□□ 0.05
CCHCR1-203ENST00000396268 SLC16A2P36021 539 aa15.38■□□□□ 0.05
CCHCR1-203ENST00000396268 RNPC3Q96LT9 517 aaKnown RBP15.38■□□□□ 0.05
CCHCR1-203ENST00000396268 FAM170AA1A519 330 aa15.38■□□□□ 0.05
CCHCR1-203ENST00000396268 TCP10L2B9ZVM9 353 aa15.38■□□□□ 0.05
CCHCR1-203ENST00000396268 IFT88Q13099 833 aa15.38■□□□□ 0.05
CCHCR1-203ENST00000396268 NAB2Q15742 525 aa15.38■□□□□ 0.05
CCHCR1-203ENST00000396268 SLC18A3Q16572 532 aa15.38■□□□□ 0.05
CCHCR1-203ENST00000396268 DALRD3Q5D0E6 543 aaKnown RBP15.38■□□□□ 0.05
CCHCR1-203ENST00000396268 TAF4BQ92750 862 aa15.38■□□□□ 0.05
CCHCR1-203ENST00000396268 MTMR4Q9NYA4 1195 aa15.38■□□□□ 0.05
CCHCR1-203ENST00000396268 RNF14Q9UBS8 474 aa15.38■□□□□ 0.05
CCHCR1-203ENST00000396268 KIF13BQ9NQT8 1826 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 NFKBIEO00221 500 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 PRELPP51888 382 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 ADAM9Q13443 819 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 HLTFQ14527 1009 aaKnown RBP eCLIP15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 ZCWPW2Q504Y3 356 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 TTBK2Q6IQ55 1244 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 RSBN1LQ6PCB5 846 aaPredicted RBP15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 GPBP1Q86WP2 473 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 CCDC125Q86Z20 511 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 CCDC65Q8IXS2 484 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 HAS1Q92839 578 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 SGIP1Q9BQI5 828 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 GOLPH3Q9H4A6 298 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 SERPINA10Q9UK55 444 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 RBAK-RBAKDNI3L0D1 243 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 hCG_1984214I3L0E3 225 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 EPB41P11171 864 aaKnown RBP15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 JAG1P78504 1218 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 ASIC2Q16515 512 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 ASPRV1Q53RT3 343 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 MAATS1Q7Z4T9 603 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 DNAAF5Q86Y56 855 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 ZNF713Q8N859 430 aaPredicted RBP15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 CEP89Q96ST8 783 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 PPANQ9NQ55 473 aaKnown RBP15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 SIPA1L1O43166 1804 aa15.37■□□□□ 0.05
CCHCR1-203ENST00000396268 POTEB3A0JP26 581 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 FRMD3A2A2Y4 597 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 POTECB2RU33 542 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 KCNK3O14649 394 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 MYCNP04198 464 aaPredicted RBP15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 PTGER2P43116 358 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 CXCL9Q07325 125 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 POTEBQ6S5H4 581 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 ADGRF4Q8IZF3 695 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 CASKIN2Q8WXE0 1202 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 CUL5Q93034 780 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 GDF3Q9NR23 364 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 ZNF233A6NK53 670 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 GDF11O95390 407 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 EGFRP00533 1210 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 PLA2G4BP0C869 781 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 TNFRSF8P28908 595 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 RRP1BQ14684 758 aaKnown RBP15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 CEP57Q86XR8 500 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 KIRREL3Q8IZU9 778 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 SPAG5Q96R06 1193 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 GMLQ99445 158 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 JMJD4Q9H9V9 463 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 EMILIN3Q9NT22 766 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 VIL1P09327 827 aaKnown RBP15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 ACTN1P12814 892 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 TGFB2P61812 414 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 FKBP1AP62942 108 aaKnown RBP15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 SETQ01105 290 aaPredicted RBP15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 MEI1Q5TIA1 1274 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 PPP4R3AQ6IN85 833 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 TEX2Q8IWB9 1127 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 TRIM59Q8IWR1 403 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 SYN2Q92777 582 aaPredicted RBP15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 CEP63Q96MT8 703 aa15.36■□□□□ 0.05
CCHCR1-203ENST00000396268 PNMA6FA0A0J9YX94 578 aa15.35■□□□□ 0.05
CCHCR1-203ENST00000396268 RAD51CO43502 376 aa15.35■□□□□ 0.05
CCHCR1-203ENST00000396268 GNA14O95837 355 aa15.35■□□□□ 0.05
CCHCR1-203ENST00000396268 MRPL12P52815 198 aaKnown RBP15.35■□□□□ 0.05
CCHCR1-203ENST00000396268 KCNH2Q12809 1159 aa15.35■□□□□ 0.05
CCHCR1-203ENST00000396268 KCTD1Q719H9 257 aa15.35■□□□□ 0.05
CCHCR1-203ENST00000396268 NT5C3AQ9H0P0 336 aa15.35■□□□□ 0.05
CCHCR1-203ENST00000396268 PSTPIP2Q9H939 334 aa15.35■□□□□ 0.05
CCHCR1-203ENST00000396268 BCCIPQ9P287 314 aaKnown RBP eCLIP15.35■□□□□ 0.05
CCHCR1-203ENST00000396268 PPP1R11O60927 126 aaPredicted RBP15.35■□□□□ 0.05
CCHCR1-203ENST00000396268 NR2F2P24468 414 aa15.35■□□□□ 0.05
CCHCR1-203ENST00000396268 TNNC1P63316 161 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms