RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 CAVIN3Q969G5 261 aa17.54■□□□□ 0.4
CCHCR1-202ENST00000396263 IDI2Q9BXS1 227 aa17.54■□□□□ 0.4
CCHCR1-202ENST00000396263 HDAC9Q9UKV0 1011 aa17.54■□□□□ 0.4
CCHCR1-202ENST00000396263 DNM3Q9UQ16 869 aa17.54■□□□□ 0.4
CCHCR1-202ENST00000396263 BTNL10A8MVZ5 291 aa17.54■□□□□ 0.4
CCHCR1-202ENST00000396263 RAD21O60216 631 aa17.54■□□□□ 0.4
CCHCR1-202ENST00000396263 SREBF1P36956 1147 aa17.54■□□□□ 0.4
CCHCR1-202ENST00000396263 SLC7A5Q01650 507 aa17.54■□□□□ 0.4
CCHCR1-202ENST00000396263 KNOP1Q1ED39 458 aaKnown RBP17.54■□□□□ 0.4
CCHCR1-202ENST00000396263 SHROOM1Q2M3G4 852 aaPredicted RBP17.54■□□□□ 0.4
CCHCR1-202ENST00000396263 PODNQ7Z5L7 613 aa17.54■□□□□ 0.4
CCHCR1-202ENST00000396263 FAM133AQ8N9E0 248 aa17.54■□□□□ 0.4
CCHCR1-202ENST00000396263 FAM20AQ96MK3 541 aa17.54■□□□□ 0.4
CCHCR1-202ENST00000396263 GRID2IPA4D2P6 1211 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 DDTLA6NHG4 134 aaPredicted RBP17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 FOSP01100 380 aaPredicted RBP17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 PSMC6P62333 389 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 C10orf76Q5T2E6 689 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 MEI1Q5TIA1 1274 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 LRRC31Q6UY01 552 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 GMCL1P1Q8NEA9 526 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 SH3GL2Q99962 352 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 ZHX3Q9H4I2 956 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 PLEKHA4Q9H4M7 779 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 PDXKO00764 312 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 NPM3O75607 178 aaKnown RBP17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 ICA1Q05084 483 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 NNTQ13423 1086 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 BMT2Q1RMZ1 405 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 CC2D2BQ6DHV5 1058 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 TMEM179Q6ZVK1 233 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 GMCL1Q96IK5 515 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 MS4A14Q96JA4 679 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 REEP2Q9BRK0 252 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 MTFR1LQ9H019 292 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 FAM198AQ9UFP1 575 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 ARMCX3Q9UH62 379 aaPredicted RBP17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 ADAMTS1Q9UHI8 967 aa17.53■□□□□ 0.4
CCHCR1-202ENST00000396263 BRCA1P38398 1863 aaKnown RBP17.52■□□□□ 0.4
CCHCR1-202ENST00000396263 FAM196BA6NMK8 535 aa17.52■□□□□ 0.4
CCHCR1-202ENST00000396263 CIITAP33076 1130 aa17.52■□□□□ 0.4
CCHCR1-202ENST00000396263 HOXD13P35453 343 aa17.52■□□□□ 0.4
CCHCR1-202ENST00000396263 CORO7P57737 925 aa17.52■□□□□ 0.4
CCHCR1-202ENST00000396263 KIAA0753Q2KHM9 967 aa17.52■□□□□ 0.4
CCHCR1-202ENST00000396263 FBXO11Q86XK2 927 aa17.52■□□□□ 0.4
CCHCR1-202ENST00000396263 GPATCH11Q8N954 259 aa17.52■□□□□ 0.4
CCHCR1-202ENST00000396263 HINFPQ9BQA5 517 aa17.52■□□□□ 0.4
CCHCR1-202ENST00000396263 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.52■□□□□ 0.4
CCHCR1-202ENST00000396263 BZW2Q9Y6E2 419 aaKnown RBP17.52■□□□□ 0.4
CCHCR1-202ENST00000396263 SPDYE3A6NKU9 549 aa17.52■□□□□ 0.39
CCHCR1-202ENST00000396263 FAM86B1E9PN63 330 aa17.52■□□□□ 0.39
CCHCR1-202ENST00000396263 F5H6K3 240 aa17.52■□□□□ 0.39
CCHCR1-202ENST00000396263 SHOX2O60902 331 aaPredicted RBP17.52■□□□□ 0.39
CCHCR1-202ENST00000396263 AFPP02771 609 aaKnown RBP17.52■□□□□ 0.39
CCHCR1-202ENST00000396263 FAM86B2P0C5J1 330 aa17.52■□□□□ 0.39
CCHCR1-202ENST00000396263 FKBP1AP62942 108 aaKnown RBP17.52■□□□□ 0.39
CCHCR1-202ENST00000396263 HDLBPQ00341 1268 aaKnown RBP17.52■□□□□ 0.39
CCHCR1-202ENST00000396263 KLRC3Q07444 240 aa17.52■□□□□ 0.39
CCHCR1-202ENST00000396263 TCP10Q12799 353 aa17.52■□□□□ 0.39
CCHCR1-202ENST00000396263 PABPC4Q13310 644 aaKnown RBP eCLIP17.52■□□□□ 0.391e-8■■■□□ 17
CCHCR1-202ENST00000396263 SH3BP5LQ7L8J4 393 aa17.52■□□□□ 0.39
CCHCR1-202ENST00000396263 IRF2BP2Q7Z5L9 587 aa17.52■□□□□ 0.39
CCHCR1-202ENST00000396263 SFR1Q86XK3 245 aa17.52■□□□□ 0.39
CCHCR1-202ENST00000396263 FAM76AQ8TAV0 307 aa17.52■□□□□ 0.39
CCHCR1-202ENST00000396263 GDF3Q9NR23 364 aa17.52■□□□□ 0.39
CCHCR1-202ENST00000396263 CALUO43852 315 aaPredicted RBP17.51■□□□□ 0.39
CCHCR1-202ENST00000396263 CACNB3P54284 484 aa17.51■□□□□ 0.39
CCHCR1-202ENST00000396263 MRPS25P82663 173 aaKnown RBP17.51■□□□□ 0.39
CCHCR1-202ENST00000396263 ARID5AQ03989 594 aa17.51■□□□□ 0.39
CCHCR1-202ENST00000396263 KCTD17Q8N5Z5 321 aa17.51■□□□□ 0.39
CCHCR1-202ENST00000396263 UPF1Q92900 1129 aaKnown RBP eCLIP17.51■□□□□ 0.39
CCHCR1-202ENST00000396263 COL4A5P29400 1685 aa17.51■□□□□ 0.39
CCHCR1-202ENST00000396263 PSME4Q14997 1843 aa17.51■□□□□ 0.39
CCHCR1-202ENST00000396263 GOLGA6CA6NDK9 693 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 MEIS1O00470 390 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 CLSTN1O94985 981 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 FTCDO95954 541 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 GOLGA6DP0CG33 693 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 UCHL3P15374 230 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 DACT2Q5SW24 774 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 ALS2CLQ60I27 953 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 INPP4AQ96PE3 977 aaPredicted RBP17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 PACSIN1Q9BY11 444 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 TYW1Q9NV66 732 aaKnown RBP17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 GOLGA6AQ9NYA3 693 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 VAV3Q9UKW4 847 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 PCDHAC2Q9Y5I4 1007 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 GOLGA8KD6RF30 607 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 CES2O00748 559 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 SLC16A3O15427 465 aaKnown RBP17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 PPIP5K2O43314 1243 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 EPB41P11171 864 aaKnown RBP17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 EXOC3L4Q17RC7 722 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 SYDE2Q5VT97 1194 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 IFT20Q8IY31 132 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 PPM1EQ8WY54 764 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 POLR3CQ9BUI4 534 aaPredicted RBP17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 FBXL5Q9UKA1 691 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 ATP8B3O60423 1300 aa17.5■□□□□ 0.39
CCHCR1-202ENST00000396263 MSH4O15457 936 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms