RNA–Protein interactions for RNA: ENST00000395812.6

CAST-206, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-206ENST00000395812 LMCD1Q9NZU5 365 aa14□□□□□ -0.17
CAST-206ENST00000395812 BRPF3Q9ULD4 1205 aa14□□□□□ -0.17
CAST-206ENST00000395812 PCDHB6Q9Y5E3 794 aa14□□□□□ -0.17
CAST-206ENST00000395812 NKRFO15226 690 aaKnown RBP eCLIP13.99□□□□□ -0.17
CAST-206ENST00000395812 TADA2AO75478 443 aa13.99□□□□□ -0.17
CAST-206ENST00000395812 CC2D1AQ6P1N0 951 aaPredicted RBP13.99□□□□□ -0.17
CAST-206ENST00000395812 ZNF365Q70YC5 407 aa13.99□□□□□ -0.17
CAST-206ENST00000395812 KIF9Q9HAQ2 790 aa13.99□□□□□ -0.17
CAST-206ENST00000395812 TMEM39AQ9NV64 488 aa13.99□□□□□ -0.17
CAST-206ENST00000395812 MYPNQ86TC9 1320 aa13.99□□□□□ -0.17
CAST-206ENST00000395812 THPOP40225 353 aa13.99□□□□□ -0.17
CAST-206ENST00000395812 RYBPQ8N488 228 aaPredicted RBP13.99□□□□□ -0.17
CAST-206ENST00000395812 SAMD3Q8N6K7 520 aa13.99□□□□□ -0.17
CAST-206ENST00000395812 SEPT8Q92599 483 aa13.99□□□□□ -0.17
CAST-206ENST00000395812 FAM163AQ96GL9 167 aaPredicted RBP13.99□□□□□ -0.17
CAST-206ENST00000395812 DHTKD1Q96HY7 919 aaPredicted RBP13.99□□□□□ -0.17
CAST-206ENST00000395812 P2RX7Q99572 595 aaKnown RBP13.99□□□□□ -0.17
CAST-206ENST00000395812 KCNQ5Q9NR82 932 aa13.99□□□□□ -0.17
CAST-206ENST00000395812 SRPRBQ9Y5M8 271 aaKnown RBP13.99□□□□□ -0.17
CAST-206ENST00000395812 FANCCQ00597 558 aa13.99□□□□□ -0.17
CAST-206ENST00000395812 PAK2Q13177 524 aa13.99□□□□□ -0.17
CAST-206ENST00000395812 MORC3Q14149 939 aa13.99□□□□□ -0.17
CAST-206ENST00000395812 SFI1A8K8P3 1242 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 CRY2Q49AN0 593 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 C16orf45Q96MC5 204 aaPredicted RBP13.98□□□□□ -0.17
CAST-206ENST00000395812 XPNPEP3Q9NQH7 507 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 SMARCA1P28370 1054 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 DSG3P32926 999 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 CYP4F22Q6NT55 531 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 SEL1LQ9UBV2 794 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 ZNF609O15014 1411 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 GOLGA6CA6NDK9 693 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 GOLGA6BA6NDN3 693 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 SPDYE16A6NNV3 312 aaPredicted RBP13.98□□□□□ -0.17
CAST-206ENST00000395812 GOLGA6DP0CG33 693 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 APOBEC3HQ6NTF7 200 aaKnown RBP13.98□□□□□ -0.17
CAST-206ENST00000395812 MAP7D3Q8IWC1 876 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 GPRASP2Q96D09 838 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 GOLGA6AQ9NYA3 693 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 CGNQ9P2M7 1197 aaKnown RBP13.98□□□□□ -0.17
CAST-206ENST00000395812 KIF13AQ9H1H9 1805 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 KCNJ18B7U540 433 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 SLC16A4O15374 487 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 PQBP1O60828 265 aaKnown RBP13.98□□□□□ -0.17
CAST-206ENST00000395812 SKIP12755 728 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 KCNJ12Q14500 433 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 ZSCAN30Q86W11 494 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 SHCBP1Q8NEM2 672 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 ZNF560Q96MR9 790 aa13.98□□□□□ -0.17
CAST-206ENST00000395812 GOLGA8IPA6NC78 632 aa13.97□□□□□ -0.17
CAST-206ENST00000395812 GOLGA8JA6NMD2 632 aa13.97□□□□□ -0.17
CAST-206ENST00000395812 IRF6O14896 467 aa13.97□□□□□ -0.17
CAST-206ENST00000395812 HOXA2O43364 376 aa13.97□□□□□ -0.17
CAST-206ENST00000395812 NFKBIAP25963 317 aa13.97□□□□□ -0.17
CAST-206ENST00000395812 ITKQ08881 620 aa13.97□□□□□ -0.17
CAST-206ENST00000395812 PPP1R2P3Q6NXS1 205 aa13.97□□□□□ -0.17
CAST-206ENST00000395812 C15orf52Q6ZUT6 534 aaKnown RBP13.97□□□□□ -0.17
CAST-206ENST00000395812 SRBD1Q8N5C6 995 aaKnown RBP13.97□□□□□ -0.17
CAST-206ENST00000395812 HEXIM2Q96MH2 286 aaKnown RBP13.97□□□□□ -0.17
CAST-206ENST00000395812 A6NJR5 290 aa13.97□□□□□ -0.17
CAST-206ENST00000395812 THAP12O43422 761 aa13.97□□□□□ -0.17
CAST-206ENST00000395812 TDP2O95551 362 aa13.97□□□□□ -0.17
CAST-206ENST00000395812 RNF219Q5W0B1 726 aaPredicted RBP13.97□□□□□ -0.17
CAST-206ENST00000395812 CYP26C1Q6V0L0 522 aa13.97□□□□□ -0.17
CAST-206ENST00000395812 U2AF1L4Q8WU68 220 aaKnown RBP13.97□□□□□ -0.17
CAST-206ENST00000395812 YME1L1Q96TA2 773 aa13.97□□□□□ -0.17
CAST-206ENST00000395812 BAG1Q99933 345 aaPredicted RBP13.97□□□□□ -0.17
CAST-206ENST00000395812 PCDHB7Q9Y5E2 793 aa13.97□□□□□ -0.17
CAST-206ENST00000395812 CD58P19256 250 aa13.97□□□□□ -0.17
CAST-206ENST00000395812 ERVK-9P63128 1117 aa13.97□□□□□ -0.17
CAST-206ENST00000395812 ERVK-24P63145 666 aa13.97□□□□□ -0.17
CAST-206ENST00000395812 LONRF3Q496Y0 759 aa13.97□□□□□ -0.17
CAST-206ENST00000395812 TAAR1Q96RJ0 339 aa13.97□□□□□ -0.17
CAST-206ENST00000395812 JMJD4Q9H9V9 463 aa13.97□□□□□ -0.17
CAST-206ENST00000395812 CTAGE9A4FU28 777 aa13.96□□□□□ -0.17
CAST-206ENST00000395812 PTPRAP18433 802 aa13.96□□□□□ -0.17
CAST-206ENST00000395812 XXYLT1Q8NBI6 393 aa13.96□□□□□ -0.17
CAST-206ENST00000395812 EIF2AK1Q9BQI3 630 aaKnown RBP13.96□□□□□ -0.17
CAST-206ENST00000395812 EPB41L4AQ9HCS5 686 aaPredicted RBP13.96□□□□□ -0.17
CAST-206ENST00000395812 BCCIPQ9P287 314 aaKnown RBP eCLIP13.96□□□□□ -0.17
CAST-206ENST00000395812 PCDHA5Q9Y5H7 936 aa13.96□□□□□ -0.17
CAST-206ENST00000395812 RECQLP46063 649 aaPredicted RBP13.96□□□□□ -0.17
CAST-206ENST00000395812 ALDH7A1P49419 539 aaKnown RBP13.96□□□□□ -0.17
CAST-206ENST00000395812 DGKZQ13574 1117 aa13.96□□□□□ -0.17
CAST-206ENST00000395812 HAUS1Q96CS2 278 aa13.96□□□□□ -0.17
CAST-206ENST00000395812 GMCL1Q96IK5 515 aa13.96□□□□□ -0.17
CAST-206ENST00000395812 ACAP3Q96P50 834 aa13.96□□□□□ -0.17
CAST-206ENST00000395812 MAP3K14Q99558 947 aa13.96□□□□□ -0.17
CAST-206ENST00000395812 RIT2Q99578 217 aa13.96□□□□□ -0.17
CAST-206ENST00000395812 MXRA8Q9BRK3 442 aa13.96□□□□□ -0.17
CAST-206ENST00000395812 TSPYL1Q9H0U9 437 aa13.96□□□□□ -0.17
CAST-206ENST00000395812 DONSONQ9NYP3 566 aa13.96□□□□□ -0.17
CAST-206ENST00000395812 MTRF1LQ9UGC7 380 aaKnown RBP13.96□□□□□ -0.17
CAST-206ENST00000395812 POTECB2RU33 542 aa13.96□□□□□ -0.17
CAST-206ENST00000395812 YWHABP31946 246 aaKnown RBP13.96□□□□□ -0.17
CAST-206ENST00000395812 CUL4BQ13620 913 aa13.96□□□□□ -0.17
CAST-206ENST00000395812 EEF2KMTQ96G04 330 aa13.96□□□□□ -0.17
CAST-206ENST00000395812 CTAGE15A4D2H0 777 aa13.96□□□□□ -0.18
CAST-206ENST00000395812 AFPP02771 609 aaKnown RBP13.96□□□□□ -0.18
CAST-206ENST00000395812 CTAGE8P0CG41 777 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms