RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 TRIP12Q14669 1992 aaPredicted RBP18.61■□□□□ 0.57
CXCL1-201ENST00000395761 MBLAC1A4D2B0 266 aaPredicted RBP18.61■□□□□ 0.57
CXCL1-201ENST00000395761 RRN3P2A6NIE6 340 aa18.61■□□□□ 0.57
CXCL1-201ENST00000395761 ZBTB42B2RXF5 422 aa18.61■□□□□ 0.57
CXCL1-201ENST00000395761 PITPNM1O00562 1244 aa18.61■□□□□ 0.57
CXCL1-201ENST00000395761 STX6O43752 255 aa18.61■□□□□ 0.57
CXCL1-201ENST00000395761 HBP1O60381 514 aa18.61■□□□□ 0.57
CXCL1-201ENST00000395761 STBD1O95210 358 aa18.61■□□□□ 0.57
CXCL1-201ENST00000395761 OR52Z1P0C646 297 aa18.61■□□□□ 0.57
CXCL1-201ENST00000395761 PDIA4P13667 645 aaKnown RBP18.61■□□□□ 0.57
CXCL1-201ENST00000395761 BMP8BP34820 402 aa18.61■□□□□ 0.57
CXCL1-201ENST00000395761 PRKCEQ02156 737 aa18.61■□□□□ 0.57
CXCL1-201ENST00000395761 FPGSQ05932 587 aa18.61■□□□□ 0.57
CXCL1-201ENST00000395761 EPHA7Q15375 998 aa18.61■□□□□ 0.57
CXCL1-201ENST00000395761 TMEM199Q8N511 208 aa18.61■□□□□ 0.57
CXCL1-201ENST00000395761 RETREG2Q8NC44 543 aa18.61■□□□□ 0.57
CXCL1-201ENST00000395761 BBXQ8WY36 941 aaPredicted RBP18.61■□□□□ 0.57
CXCL1-201ENST00000395761 UBE2OQ9C0C9 1292 aaKnown RBP18.61■□□□□ 0.57
CXCL1-201ENST00000395761 RGL1Q9NZL6 768 aa18.61■□□□□ 0.57
CXCL1-201ENST00000395761 TUBE1Q9UJT0 475 aa18.61■□□□□ 0.57
CXCL1-201ENST00000395761 TMEM150BA6NC51 233 aa18.6■□□□□ 0.57
CXCL1-201ENST00000395761 IQCF3P0C7M6 154 aa18.6■□□□□ 0.57
CXCL1-201ENST00000395761 CKBP12277 381 aa18.6■□□□□ 0.57
CXCL1-201ENST00000395761 THPOP40225 353 aa18.6■□□□□ 0.57
CXCL1-201ENST00000395761 TECP42680 631 aa18.6■□□□□ 0.57
CXCL1-201ENST00000395761 RESTQ13127 1097 aa18.6■□□□□ 0.57
CXCL1-201ENST00000395761 PTGDRQ13258 359 aa18.6■□□□□ 0.57
CXCL1-201ENST00000395761 ZNF618Q5T7W0 954 aa18.6■□□□□ 0.57
CXCL1-201ENST00000395761 C16orf59Q7L2K0 433 aa18.6■□□□□ 0.57
CXCL1-201ENST00000395761 BRAPQ7Z569 592 aa18.6■□□□□ 0.57
CXCL1-201ENST00000395761 CAGE1Q8TC20 777 aa18.6■□□□□ 0.57
CXCL1-201ENST00000395761 TNPO1Q92973 898 aaKnown RBP18.6■□□□□ 0.57
CXCL1-201ENST00000395761 VWCEQ96DN2 955 aa18.6■□□□□ 0.57
CXCL1-201ENST00000395761 DYDC2Q96IM9 177 aa18.6■□□□□ 0.57
CXCL1-201ENST00000395761 WRAP73Q9P2S5 460 aaPredicted RBP18.6■□□□□ 0.57
CXCL1-201ENST00000395761 POTEMA6NI47 508 aa18.59■□□□□ 0.57
CXCL1-201ENST00000395761 OATP04181 439 aa18.59■□□□□ 0.57
CXCL1-201ENST00000395761 P4HBP07237 508 aaKnown RBP18.59■□□□□ 0.57
CXCL1-201ENST00000395761 ACRP10323 421 aa18.59■□□□□ 0.57
CXCL1-201ENST00000395761 SELPP16109 830 aa18.59■□□□□ 0.57
CXCL1-201ENST00000395761 PSMC5P62195 406 aa18.59■□□□□ 0.57
CXCL1-201ENST00000395761 RBL2Q08999 1139 aa18.59■□□□□ 0.57
CXCL1-201ENST00000395761 CTTNQ14247 550 aaKnown RBP18.59■□□□□ 0.57
CXCL1-201ENST00000395761 ZNF484Q5JVG2 852 aa18.59■□□□□ 0.57
CXCL1-201ENST00000395761 FAM173BQ6P4H8 233 aa18.59■□□□□ 0.57
CXCL1-201ENST00000395761 TRAF7Q6Q0C0 670 aa18.59■□□□□ 0.57
CXCL1-201ENST00000395761 MTHFD1LQ6UB35 978 aa18.59■□□□□ 0.57
CXCL1-201ENST00000395761 CCDC155Q8N6L0 562 aa18.59■□□□□ 0.57
CXCL1-201ENST00000395761 NRBP2Q9NSY0 501 aa18.59■□□□□ 0.57
CXCL1-201ENST00000395761 DDX11L8A8MPP1 907 aa18.58■□□□□ 0.56
CXCL1-201ENST00000395761 SLITRK3O94933 977 aa18.58■□□□□ 0.56
CXCL1-201ENST00000395761 KLRC1P26715 233 aa18.58■□□□□ 0.56
CXCL1-201ENST00000395761 QARSP47897 775 aaKnown RBP18.58■□□□□ 0.56
CXCL1-201ENST00000395761 CYP4A11Q02928 519 aa18.58■□□□□ 0.56
CXCL1-201ENST00000395761 PPIGQ13427 754 aaKnown RBP eCLIP18.58■□□□□ 0.56
CXCL1-201ENST00000395761 GPNMBQ14956 572 aa18.58■□□□□ 0.56
CXCL1-201ENST00000395761 IL17AQ16552 155 aa18.58■□□□□ 0.56
CXCL1-201ENST00000395761 C9orf50Q5SZB4 431 aa18.58■□□□□ 0.56
CXCL1-201ENST00000395761 LRRC8DQ7L1W4 858 aa18.58■□□□□ 0.56
CXCL1-201ENST00000395761 DNAJB3Q8WWF6 145 aa18.58■□□□□ 0.56
CXCL1-201ENST00000395761 FAM167AQ96KS9 214 aa18.58■□□□□ 0.56
CXCL1-201ENST00000395761 HSD17B14Q9BPX1 270 aa18.58■□□□□ 0.56
CXCL1-201ENST00000395761 EIF2AK1Q9BQI3 630 aaKnown RBP18.58■□□□□ 0.56
CXCL1-201ENST00000395761 LXNQ9BS40 222 aa18.58■□□□□ 0.56
CXCL1-201ENST00000395761 COL1A2P08123 1366 aa18.57■□□□□ 0.56
CXCL1-201ENST00000395761 ZBTB39O15060 712 aa18.57■□□□□ 0.56
CXCL1-201ENST00000395761 DDIT3P35638 169 aa18.57■□□□□ 0.56
CXCL1-201ENST00000395761 SHHQ15465 462 aa18.57■□□□□ 0.56
CXCL1-201ENST00000395761 XKR3Q5GH77 459 aa18.57■□□□□ 0.56
CXCL1-201ENST00000395761 TAF2Q6P1X5 1199 aa18.57■□□□□ 0.56
CXCL1-201ENST00000395761 ANO5Q75V66 913 aa18.57■□□□□ 0.56
CXCL1-201ENST00000395761 DEFB128Q7Z7B8 93 aa18.57■□□□□ 0.56
CXCL1-201ENST00000395761 TPH2Q8IWU9 490 aa18.57■□□□□ 0.56
CXCL1-201ENST00000395761 SH2D3AQ9BRG2 576 aa18.57■□□□□ 0.56
CXCL1-201ENST00000395761 NIFKQ9BYG3 293 aaKnown RBP18.57■□□□□ 0.56
CXCL1-201ENST00000395761 OSBPL7Q9BZF2 842 aa18.57■□□□□ 0.56
CXCL1-201ENST00000395761 FAM49AQ9H0Q0 323 aaPredicted RBP18.57■□□□□ 0.56
CXCL1-201ENST00000395761 IL23AQ9NPF7 189 aa18.57■□□□□ 0.56
CXCL1-201ENST00000395761 PCDHA2Q9Y5H9 948 aa18.57■□□□□ 0.56
CXCL1-201ENST00000395761 KAT6AQ92794 2004 aa18.56■□□□□ 0.56
CXCL1-201ENST00000395761 MYH9P35579 1960 aaKnown RBP18.56■□□□□ 0.56
CXCL1-201ENST00000395761 RSPH10B2B2RC85 870 aa18.56■□□□□ 0.56
CXCL1-201ENST00000395761 C22orf31O95567 290 aa18.56■□□□□ 0.56
CXCL1-201ENST00000395761 CTSHP09668 335 aa18.56■□□□□ 0.56
CXCL1-201ENST00000395761 RSPH10BP0C881 870 aa18.56■□□□□ 0.56
CXCL1-201ENST00000395761 ATP2C1P98194 919 aaPredicted RBP18.56■□□□□ 0.56
CXCL1-201ENST00000395761 PKP1Q13835 747 aa18.56■□□□□ 0.56
CXCL1-201ENST00000395761 MBTPS1Q14703 1052 aa18.56■□□□□ 0.56
CXCL1-201ENST00000395761 FOXD4L5Q5VV16 416 aaPredicted RBP18.56■□□□□ 0.56
CXCL1-201ENST00000395761 ZNF579Q8NAF0 562 aaKnown RBP18.56■□□□□ 0.56
CXCL1-201ENST00000395761 FOXD4L4Q8WXT5 416 aaPredicted RBP18.56■□□□□ 0.56
CXCL1-201ENST00000395761 CEP89Q96ST8 783 aa18.56■□□□□ 0.56
CXCL1-201ENST00000395761 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.56■□□□□ 0.56
CXCL1-201ENST00000395761 SEPT9Q9UHD8 586 aaPredicted RBP18.56■□□□□ 0.56
CXCL1-201ENST00000395761 WDR81Q562E7 1941 aa18.56■□□□□ 0.56
CXCL1-201ENST00000395761 A0A087WWV3 80 aa18.55■□□□□ 0.56
CXCL1-201ENST00000395761 LAD1O00515 517 aa18.55■□□□□ 0.56
CXCL1-201ENST00000395761 NBNO60934 754 aa18.55■□□□□ 0.56
CXCL1-201ENST00000395761 SPATA31C1P0DKV0 1188 aa18.55■□□□□ 0.56
CXCL1-201ENST00000395761 FXR2P51116 673 aaKnown RBP eCLIP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms