RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 USP20Q9Y2K6 914 aa15.78■□□□□ 0.12
SREBF1-205ENST00000395757 C4AP0C0L4 1744 aa15.78■□□□□ 0.12
SREBF1-205ENST00000395757 C4BP0C0L5 1744 aa15.78■□□□□ 0.12
SREBF1-205ENST00000395757 AFPP02771 609 aaKnown RBP15.78■□□□□ 0.12
SREBF1-205ENST00000395757 PSEN1P49768 467 aa15.78■□□□□ 0.12
SREBF1-205ENST00000395757 CRY2Q49AN0 593 aa15.78■□□□□ 0.12
SREBF1-205ENST00000395757 ALKBH5Q6P6C2 394 aaKnown RBP15.78■□□□□ 0.12
SREBF1-205ENST00000395757 MIER3Q7Z3K6 550 aa15.78■□□□□ 0.12
SREBF1-205ENST00000395757 PURBQ96QR8 312 aaKnown RBP15.78■□□□□ 0.12
SREBF1-205ENST00000395757 KCND1Q9NSA2 647 aa15.78■□□□□ 0.12
SREBF1-205ENST00000395757 DLATP10515 647 aaKnown RBP15.77■□□□□ 0.12
SREBF1-205ENST00000395757 GCFC2P16383 781 aaKnown RBP15.77■□□□□ 0.12
SREBF1-205ENST00000395757 TNIP1Q15025 636 aa15.77■□□□□ 0.12
SREBF1-205ENST00000395757 FAM102BQ5T8I3 360 aa15.77■□□□□ 0.12
SREBF1-205ENST00000395757 GLYCTKQ8IVS8 523 aa15.77■□□□□ 0.12
SREBF1-205ENST00000395757 PLAGL2Q9UPG8 496 aa15.77■□□□□ 0.12
SREBF1-205ENST00000395757 MYH10P35580 1976 aa15.77■□□□□ 0.12
SREBF1-205ENST00000395757 GOLGA6L10A6NI86 522 aa15.77■□□□□ 0.11
SREBF1-205ENST00000395757 TNFAIP3P21580 790 aa15.77■□□□□ 0.11
SREBF1-205ENST00000395757 PDIA5Q14554 519 aa15.77■□□□□ 0.11
SREBF1-205ENST00000395757 GBP6Q6ZN66 633 aa15.77■□□□□ 0.11
SREBF1-205ENST00000395757 GAKO14976 1311 aa15.77■□□□□ 0.11
SREBF1-205ENST00000395757 SNED1Q8TER0 1413 aa15.77■□□□□ 0.11
SREBF1-205ENST00000395757 BACH1O14867 736 aa15.76■□□□□ 0.11
SREBF1-205ENST00000395757 IFFO1Q0D2I5 559 aa15.76■□□□□ 0.11
SREBF1-205ENST00000395757 TRAPPC11Q7Z392 1133 aa15.76■□□□□ 0.11
SREBF1-205ENST00000395757 PPM1KQ8N3J5 372 aa15.76■□□□□ 0.11
SREBF1-205ENST00000395757 FAM76AQ8TAV0 307 aa15.76■□□□□ 0.11
SREBF1-205ENST00000395757 DDX47Q9H0S4 455 aaKnown RBP15.76■□□□□ 0.11
SREBF1-205ENST00000395757 SNX12Q9UMY4 172 aa15.76■□□□□ 0.11
SREBF1-205ENST00000395757 RASSF10A6NK89 507 aa15.76■□□□□ 0.11
SREBF1-205ENST00000395757 GCLMP48507 274 aa15.76■□□□□ 0.11
SREBF1-205ENST00000395757 PTK2Q05397 1052 aa15.76■□□□□ 0.11
SREBF1-205ENST00000395757 KNOP1Q1ED39 458 aaKnown RBP15.76■□□□□ 0.11
SREBF1-205ENST00000395757 SH3BP5LQ7L8J4 393 aa15.76■□□□□ 0.11
SREBF1-205ENST00000395757 ZNF668Q96K58 619 aaPredicted RBP15.76■□□□□ 0.11
SREBF1-205ENST00000395757 SH2D4AQ9H788 454 aa15.76■□□□□ 0.11
SREBF1-205ENST00000395757 SF3B2Q13435 895 aaKnown RBP15.76■□□□□ 0.11
SREBF1-205ENST00000395757 ERGIC2Q96RQ1 377 aa15.76■□□□□ 0.11
SREBF1-205ENST00000395757 KIFC3Q9BVG8 833 aa15.76■□□□□ 0.11
SREBF1-205ENST00000395757 CTTNBP2NLQ9P2B4 639 aa15.76■□□□□ 0.11
SREBF1-205ENST00000395757 HGSO14964 777 aaPredicted RBP15.75■□□□□ 0.11
SREBF1-205ENST00000395757 AKAP3O75969 853 aa15.75■□□□□ 0.11
SREBF1-205ENST00000395757 ARP10275 920 aa15.75■□□□□ 0.11
SREBF1-205ENST00000395757 KRT5P13647 590 aa15.75■□□□□ 0.11
SREBF1-205ENST00000395757 MCM3P25205 808 aa15.75■□□□□ 0.11
SREBF1-205ENST00000395757 STAT1P42224 750 aa15.75■□□□□ 0.11
SREBF1-205ENST00000395757 VPS41P49754 854 aa15.75■□□□□ 0.11
SREBF1-205ENST00000395757 PPP1R18Q6NYC8 613 aa15.75■□□□□ 0.11
SREBF1-205ENST00000395757 DNAJC19Q96DA6 116 aa15.75■□□□□ 0.11
SREBF1-205ENST00000395757 L1RE1Q9UN81 338 aa15.75■□□□□ 0.11
SREBF1-205ENST00000395757 H0YHG0 523 aa15.75■□□□□ 0.11
SREBF1-205ENST00000395757 GABPAQ06546 454 aa15.75■□□□□ 0.11
SREBF1-205ENST00000395757 KCNMA1Q12791 1236 aa15.75■□□□□ 0.11
SREBF1-205ENST00000395757 FOXR1Q6PIV2 292 aa15.75■□□□□ 0.11
SREBF1-205ENST00000395757 EHD4Q9H223 541 aa15.75■□□□□ 0.11
SREBF1-205ENST00000395757 ZBTB7AO95365 584 aa15.75■□□□□ 0.11
SREBF1-205ENST00000395757 SERPING1P05155 500 aa15.75■□□□□ 0.11
SREBF1-205ENST00000395757 TCP1P17987 556 aaKnown RBP15.75■□□□□ 0.11
SREBF1-205ENST00000395757 TRADDQ15628 312 aa15.75■□□□□ 0.11
SREBF1-205ENST00000395757 MEIS2O14770 477 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 CARSP49589 748 aaKnown RBP15.74■□□□□ 0.11
SREBF1-205ENST00000395757 XKR9Q5GH70 373 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 RNF187Q5TA31 235 aaPredicted RBP15.74■□□□□ 0.11
SREBF1-205ENST00000395757 GPRC5CQ9NQ84 441 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.74■□□□□ 0.11
SREBF1-205ENST00000395757 ESYT2A0FGR8 921 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 PSMD14O00487 310 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 KRIT1O00522 736 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 KRT14P02533 472 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 H2AFZP0C0S5 128 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 SOX10P56693 466 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 SLC27A3Q5K4L6 730 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 LMBRD2Q68DH5 695 aaPredicted RBP15.74■□□□□ 0.11
SREBF1-205ENST00000395757 HHIPL2Q6UWX4 724 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 LRRC55Q6ZSA7 311 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.74■□□□□ 0.11
SREBF1-205ENST00000395757 H2AFVQ71UI9 128 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 EEPD1Q7L9B9 569 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 JDP2Q8WYK2 163 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 CNKSR1Q969H4 720 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 P2RX7Q99572 595 aaKnown RBP15.74■□□□□ 0.11
SREBF1-205ENST00000395757 XIRP1Q702N8 1843 aaKnown RBP15.74■□□□□ 0.11
SREBF1-205ENST00000395757 STRCQ7RTU9 1775 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 SHTN1A0MZ66 631 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 DEFB132Q7Z7B7 95 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 SAAL1Q96ER3 474 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 FAM163AQ96GL9 167 aaPredicted RBP15.74■□□□□ 0.11
SREBF1-205ENST00000395757 PARVGQ9HBI0 331 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 ACP6Q9NPH0 428 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 STK32BQ9NY57 414 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 SIK3Q9Y2K2 1263 aa15.74■□□□□ 0.11
SREBF1-205ENST00000395757 CHD4Q14839 1912 aa15.73■□□□□ 0.11
SREBF1-205ENST00000395757 TRIM66O15016 1216 aa15.73■□□□□ 0.11
SREBF1-205ENST00000395757 UCHL3P15374 230 aa15.73■□□□□ 0.11
SREBF1-205ENST00000395757 PEX3P56589 373 aa15.73■□□□□ 0.11
SREBF1-205ENST00000395757 TUBB2AQ13885 445 aa15.73■□□□□ 0.11
SREBF1-205ENST00000395757 PPP4R3AQ6IN85 833 aa15.73■□□□□ 0.11
SREBF1-205ENST00000395757 OR2W6PQ8NHA6 318 aa15.73■□□□□ 0.11
SREBF1-205ENST00000395757 CHURC1Q8WUH1 139 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms