RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 RESP18Q5W5W9 173 aa12.9□□□□□ -0.34
RTN1-203ENST00000395090 MOXD1Q6UVY6 613 aa12.9□□□□□ -0.34
RTN1-203ENST00000395090 MRPS27Q92552 414 aaKnown RBP12.9□□□□□ -0.34
RTN1-203ENST00000395090 MTMR9Q96QG7 549 aa12.9□□□□□ -0.34
RTN1-203ENST00000395090 HPSEQ9Y251 543 aa12.9□□□□□ -0.34
RTN1-203ENST00000395090 FAM13AO94988 1023 aa12.89□□□□□ -0.35
RTN1-203ENST00000395090 HUNKP57058 714 aa12.89□□□□□ -0.35
RTN1-203ENST00000395090 HERVK_113P62684 666 aa12.89□□□□□ -0.35
RTN1-203ENST00000395090 IRX3P78415 501 aaPredicted RBP12.89□□□□□ -0.35
RTN1-203ENST00000395090 ARHGAP4P98171 946 aa12.89□□□□□ -0.35
RTN1-203ENST00000395090 GRIN1Q05586 938 aa12.89□□□□□ -0.35
RTN1-203ENST00000395090 FAM160A1Q05DH4 1040 aa12.89□□□□□ -0.35
RTN1-203ENST00000395090 MUM1L1Q5H9M0 696 aa12.89□□□□□ -0.35
RTN1-203ENST00000395090 SNRNP48Q6IEG0 339 aaKnown RBP12.89□□□□□ -0.35
RTN1-203ENST00000395090 CAVIN1Q6NZI2 390 aaKnown RBP12.89□□□□□ -0.35
RTN1-203ENST00000395090 SAPCD2Q86UD0 394 aa12.89□□□□□ -0.35
RTN1-203ENST00000395090 FSIP1Q8NA03 581 aa12.89□□□□□ -0.35
RTN1-203ENST00000395090 SMC1BQ8NDV3 1235 aa12.89□□□□□ -0.35
RTN1-203ENST00000395090 CLIC6Q96NY7 704 aa12.89□□□□□ -0.35
RTN1-203ENST00000395090 TMEM60Q9H2L4 133 aa12.89□□□□□ -0.35
RTN1-203ENST00000395090 GOLPH3LQ9H4A5 285 aa12.89□□□□□ -0.35
RTN1-203ENST00000395090 TIMMDC1Q9NPL8 285 aa12.89□□□□□ -0.35
RTN1-203ENST00000395090 BTBD7Q9P203 1132 aa12.89□□□□□ -0.35
RTN1-203ENST00000395090 STIM2Q9P246 746 aa12.89□□□□□ -0.35
RTN1-203ENST00000395090 DNMT3LQ9UJW3 386 aa12.89□□□□□ -0.35
RTN1-203ENST00000395090 TRPM7Q96QT4 1865 aa12.89□□□□□ -0.35
RTN1-203ENST00000395090 TNFRSF10BO14763 440 aa12.88□□□□□ -0.35
RTN1-203ENST00000395090 NPR3P17342 541 aa12.88□□□□□ -0.35
RTN1-203ENST00000395090 ANKRD23Q86SG2 305 aa12.88□□□□□ -0.35
RTN1-203ENST00000395090 FMR1NBQ8N0W7 255 aaPredicted RBP12.88□□□□□ -0.35
RTN1-203ENST00000395090 BRI3BPQ8WY22 251 aa12.88□□□□□ -0.35
RTN1-203ENST00000395090 SYAP1Q96A49 352 aaPredicted RBP12.88□□□□□ -0.35
RTN1-203ENST00000395090 DACT1Q9NYF0 836 aa12.88□□□□□ -0.35
RTN1-203ENST00000395090 A0A1B0GVL5 298 aa12.88□□□□□ -0.35
RTN1-203ENST00000395090 NEMFO60524 1076 aa12.88□□□□□ -0.35
RTN1-203ENST00000395090 CNMDO75829 334 aa12.88□□□□□ -0.35
RTN1-203ENST00000395090 TDP2O95551 362 aa12.88□□□□□ -0.35
RTN1-203ENST00000395090 DEKP35659 375 aaKnown RBP12.88□□□□□ -0.35
RTN1-203ENST00000395090 NDUFA8P51970 172 aa12.88□□□□□ -0.35
RTN1-203ENST00000395090 RPS6P62753 249 aaKnown RBP12.88□□□□□ -0.35
RTN1-203ENST00000395090 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.88□□□□□ -0.35
RTN1-203ENST00000395090 FCHSD1Q86WN1 690 aa12.88□□□□□ -0.35
RTN1-203ENST00000395090 RIOX2Q8IUF8 465 aa12.88□□□□□ -0.35
RTN1-203ENST00000395090 CHST13Q8NET6 341 aa12.88□□□□□ -0.35
RTN1-203ENST00000395090 SYTL5Q8TDW5 730 aaPredicted RBP12.88□□□□□ -0.35
RTN1-203ENST00000395090 CSRNP2Q9H175 543 aa12.88□□□□□ -0.35
RTN1-203ENST00000395090 RNF146Q9NTX7 359 aa12.88□□□□□ -0.35
RTN1-203ENST00000395090 DDX19AQ9NUU7 478 aaKnown RBP12.88□□□□□ -0.35
RTN1-203ENST00000395090 COL20A1Q9P218 1284 aa12.88□□□□□ -0.35
RTN1-203ENST00000395090 RBPJLQ9UBG7 517 aa12.88□□□□□ -0.35
RTN1-203ENST00000395090 DACH1Q9UI36 760 aa12.88□□□□□ -0.35
RTN1-203ENST00000395090 RABGAP1Q9Y3P9 1069 aa12.88□□□□□ -0.35
RTN1-203ENST00000395090 RPTORQ8N122 1335 aa12.87□□□□□ -0.35
RTN1-203ENST00000395090 CCL15-CCL14A0A0B4J2E2 113 aa12.87□□□□□ -0.35
RTN1-203ENST00000395090 A0A1B0GTH6 734 aa12.87□□□□□ -0.35
RTN1-203ENST00000395090 BTBD19C9JJ37 291 aa12.87□□□□□ -0.35
RTN1-203ENST00000395090 SLC37A4O43826 429 aa12.87□□□□□ -0.35
RTN1-203ENST00000395090 MAN1A2O60476 641 aa12.87□□□□□ -0.35
RTN1-203ENST00000395090 TOMM70O94826 608 aa12.87□□□□□ -0.35
RTN1-203ENST00000395090 OR52Z1P0C646 297 aa12.87□□□□□ -0.35
RTN1-203ENST00000395090 PFKFB1P16118 471 aa12.87□□□□□ -0.35
RTN1-203ENST00000395090 MPSTP25325 297 aa12.87□□□□□ -0.35
RTN1-203ENST00000395090 BRD2P25440 801 aaKnown RBP12.87□□□□□ -0.35
RTN1-203ENST00000395090 LONP1P36776 959 aaKnown RBP12.87□□□□□ -0.35
RTN1-203ENST00000395090 ECM1Q16610 540 aa12.87□□□□□ -0.35
RTN1-203ENST00000395090 CCL15Q16663 113 aa12.87□□□□□ -0.35
RTN1-203ENST00000395090 C11orf91Q3C1V1 193 aa12.87□□□□□ -0.35
RTN1-203ENST00000395090 Q4G0T1 1027 aa12.87□□□□□ -0.35
RTN1-203ENST00000395090 CCDC183Q5T5S1 534 aa12.87□□□□□ -0.35
RTN1-203ENST00000395090 DTHD1Q6ZMT9 781 aa12.87□□□□□ -0.35
RTN1-203ENST00000395090 CCDC73Q6ZRK6 1079 aa12.87□□□□□ -0.35
RTN1-203ENST00000395090 SPATC1LQ9H0A9 340 aa12.87□□□□□ -0.35
RTN1-203ENST00000395090 HOMER2Q9NSB8 354 aa12.87□□□□□ -0.35
RTN1-203ENST00000395090 DDX25Q9UHL0 483 aaKnown RBP12.87□□□□□ -0.35
RTN1-203ENST00000395090 FRMPD4Q14CM0 1322 aa12.87□□□□□ -0.35
RTN1-203ENST00000395090 COL11A1P12107 1806 aaPredicted RBP12.87□□□□□ -0.35
RTN1-203ENST00000395090 MYH7BA7E2Y1 1941 aa12.86□□□□□ -0.35
RTN1-203ENST00000395090 VWA3AA6NCI4 1184 aa12.86□□□□□ -0.35
RTN1-203ENST00000395090 FAM86B1E9PN63 330 aa12.86□□□□□ -0.35
RTN1-203ENST00000395090 LETM1O95202 739 aaPredicted RBP12.86□□□□□ -0.35
RTN1-203ENST00000395090 FAM86B2P0C5J1 330 aa12.86□□□□□ -0.35
RTN1-203ENST00000395090 BAATQ14032 418 aaPredicted RBP12.86□□□□□ -0.35
RTN1-203ENST00000395090 ZSCAN23Q3MJ62 389 aa12.86□□□□□ -0.35
RTN1-203ENST00000395090 RGMBQ6NW40 437 aa12.86□□□□□ -0.35
RTN1-203ENST00000395090 RNF207Q6ZRF8 634 aa12.86□□□□□ -0.35
RTN1-203ENST00000395090 RASAL3Q86YV0 1011 aa12.86□□□□□ -0.35
RTN1-203ENST00000395090 HAS1Q92839 578 aa12.86□□□□□ -0.35
RTN1-203ENST00000395090 LENG9Q96B70 501 aa12.86□□□□□ -0.35
RTN1-203ENST00000395090 HHIPL1Q96JK4 782 aa12.86□□□□□ -0.35
RTN1-203ENST00000395090 TIGD1Q96MW7 591 aa12.86□□□□□ -0.35
RTN1-203ENST00000395090 PTPN18Q99952 460 aa12.86□□□□□ -0.35
RTN1-203ENST00000395090 ACAD9Q9H845 621 aa12.86□□□□□ -0.35
RTN1-203ENST00000395090 EHMT1Q9H9B1 1298 aa12.86□□□□□ -0.35
RTN1-203ENST00000395090 KCNMB3Q9NPA1 279 aa12.86□□□□□ -0.35
RTN1-203ENST00000395090 KLK14Q9P0G3 267 aa12.86□□□□□ -0.35
RTN1-203ENST00000395090 A0A0G2JMZ2 1700 aa12.86□□□□□ -0.35
RTN1-203ENST00000395090 PDHXO00330 501 aa12.85□□□□□ -0.35
RTN1-203ENST00000395090 TBX3O15119 743 aa12.85□□□□□ -0.35
RTN1-203ENST00000395090 ZNF202O95125 648 aa12.85□□□□□ -0.35
RTN1-203ENST00000395090 SLC25A27O95847 323 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms