RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 PFKFB3Q16875 520 aaPredicted RBP7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 APOA5Q6Q788 366 aa7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 MTHFD1LQ6UB35 978 aa7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 BBXQ8WY36 941 aaPredicted RBP7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 IRF2BPLQ9H1B7 796 aa7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 CHD9Q3L8U1 2897 aa7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 ZBTB42B2RXF5 422 aa7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 MAGEB2O15479 319 aa7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 PRPF3O43395 683 aaKnown RBP7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 CRYBB1P53674 252 aaPredicted RBP7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 ARHGAP4P98171 946 aa7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 CEP55Q53EZ4 464 aa7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 CCDC12Q8WUD4 166 aaPredicted RBP7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 SDF4Q9BRK5 362 aa7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 C22orf23Q9BZE7 217 aa7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 FAM217BQ9NTX9 383 aaPredicted RBP7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 SETD4Q9NVD3 440 aa7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 CDY2AQ9Y6F7 541 aa7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 PATJQ8NI35 1801 aa7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 SPDYE3A6NKU9 549 aa7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 RFXAPO00287 272 aa7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 PTCRAQ6ISU1 281 aaPredicted RBP7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 DHX32Q7L7V1 743 aaKnown RBP7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 PPP2R3CQ969Q6 453 aa7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 VAT1LQ9HCJ6 419 aa7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 PLAGL2Q9UPG8 496 aa7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 CEP131Q9UPN4 1083 aa7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 TAF6LQ9Y6J9 622 aa7.12□□□□□ -1.27
SMARCAD1-203ENST00000394961 CCDC196A0A1B0GTZ2 297 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 C9IYK1 514 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 DHX16O60231 1041 aaKnown RBP7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 ATP9AO75110 1047 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 PLEKHA8P1O95397 391 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 KRT76Q01546 638 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 TFF2Q03403 129 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 CAMK1Q14012 370 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 PCBP1Q15365 356 aaKnown RBP eCLIP7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 TCEAL5Q5H9L2 206 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 WWC2Q6AWC2 1192 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 GALNT17Q6IS24 598 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 CYP26C1Q6V0L0 522 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 RTN4RL1Q86UN2 441 aaPredicted RBP7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 GJD3Q8N144 294 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 YME1L1Q96TA2 773 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 ANO3Q9BYT9 981 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 TMX1Q9H3N1 280 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 AAASQ9NRG9 546 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 KCNH7Q9NS40 1196 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 TMEM161AQ9NX61 479 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 TDRD15B5MCY1 1934 aaKnown RBP7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 COL4A2P08572 1712 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 DCXO43602 365 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 USP11P51784 963 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 ADCY7P51828 1080 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 ACTR2P61160 394 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 CCDC85BQ15834 202 aaPredicted RBP7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 DUSP6Q16828 381 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 Q4G0T1 1027 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 CENPQQ7L2Z9 268 aaPredicted RBP7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 SMRP1Q8NCR6 262 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 SPPL3Q8TCT6 385 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 BICD2Q8TD16 824 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 BORCS6Q96GS4 357 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 RIT2Q99578 217 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 NIFKQ9BYG3 293 aaKnown RBP7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 EPHX3Q9H6B9 360 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 CHST12Q9NRB3 414 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 CD207Q9UJ71 328 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 MTMR7Q9Y216 660 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 SLC12A7Q9Y666 1083 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 IGKV6-21A0A0C4DH24 114 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 GPR32O75388 356 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 C22orf31O95567 290 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 ITGB3BPQ13352 177 aaPredicted RBP7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 CEP89Q96ST8 783 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 RNF26Q9BY78 433 aaPredicted RBP7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 SZT2Q5T011 3432 aa7.11□□□□□ -1.27
SMARCAD1-203ENST00000394961 M0R2N6 131 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 GPR182O15218 404 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 SCG2P13521 617 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 LAG3P18627 525 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 SFNP31947 248 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 POLGP54098 1239 aaPredicted RBP7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 GIT2Q14161 759 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 MIS18BP1Q6P0N0 1132 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 USP17L6PQ6QN14 398 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 CWH43Q9H720 699 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 IRAK3Q9Y616 596 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 M0QZ92 97 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 EOMESO95936 686 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 EFEMP2O95967 443 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 INSRRP14616 1297 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 TARBP2Q15633 366 aaKnown RBP7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 B4GALNT3Q6L9W6 998 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 FCHSD1Q86WN1 690 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 EXOC8Q8IYI6 725 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 EDAQ92838 391 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 SLC5A5Q92911 643 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 NEK1Q96PY6 1258 aa7.1□□□□□ -1.27
SMARCAD1-203ENST00000394961 BCAS3Q9H6U6 928 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms