RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 VTI1AQ96AJ9 217 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 DHX36Q9H2U1 1008 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 KCNMB3Q9NPA1 279 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 GPCPD1Q9NPB8 672 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 FAM153AQ9UHL3 310 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 NAGPAQ9UK23 515 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 TTC7AQ9ULT0 858 aaPredicted RBP10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 ATF5Q9Y2D1 282 aaPredicted RBP10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 TMCO5BA8MYB1 307 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 BHMG1C9JSJ3 638 aaPredicted RBP10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 KRIT1O00522 736 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 KCNQ2O43526 872 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 LMNB1P20700 586 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 PTK2Q05397 1052 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 GABPAQ06546 454 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 DDR1Q08345 913 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 BMT2Q1RMZ1 405 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 CCDC121Q6ZUS5 278 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 STXBP4Q6ZWJ1 553 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 IRF2BP2Q7Z5L9 587 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 HOOK3Q86VS8 718 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 LRRC47Q8N1G4 583 aaKnown RBP10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 SH2D3CQ8N5H7 860 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 LRRC57Q8N9N7 239 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 MYCBPAPQ8TBZ2 947 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 RBM17Q96I25 401 aaKnown RBP10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 FAM20AQ96MK3 541 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 MBOAT7Q96N66 472 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 CCT8L2Q96SF2 557 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 HINFPQ9BQA5 517 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 SRP68Q9UHB9 627 aaKnown RBP10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 SAMM50Q9Y512 469 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 CAPN7Q9Y6W3 813 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 MYH4Q9Y623 1939 aa10.96□□□□□ -0.65
UBE2D3-208ENST00000394803 ESYT3A0FGR9 886 aa10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 GMNCA6NCL1 334 aa10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 ANKRD65E5RJM6 399 aa10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 E7EVH7 732 aa10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 E9PMD0 336 aa10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 TBCAO75347 108 aaKnown RBP10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 RFX1P22670 979 aa10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 RFC4P35249 363 aa10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 HSD17B3P37058 310 aa10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 STAT1P42224 750 aa10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 SLC12A3P55017 1021 aa10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 TRAF1Q13077 416 aa10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 NFIL3Q16649 462 aa10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 UBE2SQ16763 222 aa10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 ODF2Q5BJF6 829 aa10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 DPP8Q6V1X1 898 aaPredicted RBP10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 SLFN11Q7Z7L1 901 aa10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 SYT2Q8N9I0 419 aaPredicted RBP10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 TPCN2Q8NHX9 752 aa10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 DCAF4Q8WV16 495 aa10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 ZHX3Q9H4I2 956 aa10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 A1CFQ9NQ94 594 aaKnown RBP10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 SERPINB13Q9UIV8 391 aa10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 AMFRQ9UKV5 643 aa10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 NOC2LQ9Y3T9 749 aaKnown RBP10.96□□□□□ -0.66
UBE2D3-208ENST00000394803 UBE4BO95155 1302 aa10.95□□□□□ -0.66
UBE2D3-208ENST00000394803 SART1O43290 800 aaKnown RBP10.95□□□□□ -0.66
UBE2D3-208ENST00000394803 BBOX1O75936 387 aa10.95□□□□□ -0.66
UBE2D3-208ENST00000394803 PAEPP09466 180 aa10.95□□□□□ -0.66
UBE2D3-208ENST00000394803 HSPA6P17066 643 aa10.95□□□□□ -0.66
UBE2D3-208ENST00000394803 RPA1P27694 616 aa10.95□□□□□ -0.66
UBE2D3-208ENST00000394803 HNRNPH1P31943 449 aaKnown RBP10.95□□□□□ -0.66
UBE2D3-208ENST00000394803 DNA2P51530 1060 aa10.95□□□□□ -0.66
UBE2D3-208ENST00000394803 MNAT1P51948 309 aa10.95□□□□□ -0.66
UBE2D3-208ENST00000394803 ERVK-9P63128 1117 aa10.95□□□□□ -0.66
UBE2D3-208ENST00000394803 GUCY1A3Q02108 690 aa10.95□□□□□ -0.66
UBE2D3-208ENST00000394803 TTC19Q6DKK2 380 aaPredicted RBP10.95□□□□□ -0.66
UBE2D3-208ENST00000394803 GLIS3Q8NEA6 775 aa10.95□□□□□ -0.66
UBE2D3-208ENST00000394803 TBC1D7Q9P0N9 293 aa10.95□□□□□ -0.66
UBE2D3-208ENST00000394803 RASAL2Q9UJF2 1139 aa10.95□□□□□ -0.66
UBE2D3-208ENST00000394803 ARFGEF1Q9Y6D6 1849 aa10.95□□□□□ -0.66
UBE2D3-208ENST00000394803 POTEB3A0JP26 581 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 POTECB2RU33 542 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 EIF3DO15371 548 aaKnown RBP eCLIP10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 EDIL3O43854 480 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 PON1P27169 355 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 RDXP35241 583 aaKnown RBP10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 PPP2R2AP63151 447 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 GPSM2P81274 684 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 MRPS25P82663 173 aaKnown RBP10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 GRIK5Q16478 980 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 ECM1Q16610 540 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 Q4G0T1 1027 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 RNF187Q5TA31 235 aaPredicted RBP10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 POTEBQ6S5H4 581 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 EPM2AIP1Q7L775 607 aaPredicted RBP10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 ZNF571Q7Z3V5 609 aaPredicted RBP10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 UBLCP1Q8WVY7 318 aaPredicted RBP10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 SEC14L1Q92503 715 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 MKNK1Q9BUB5 465 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 ANO3Q9BYT9 981 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 VCPKMTQ9H867 229 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 GEMIN8Q9NWZ8 242 aaKnown RBP10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 NCANO14594 1321 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 FAM187AA6NFU0 413 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 AKR1B1P15121 316 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms