RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 USH1CQ9Y6N9 552 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 FAM205CA6NFA0 338 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 TTC36A6NLP5 189 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 VIL1P09327 827 aaKnown RBP6.19□□□□□ -1.42
RFFL-202ENST00000394597 APBA1Q02410 837 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 INTS8Q75QN2 995 aaKnown RBP6.19□□□□□ -1.42
RFFL-202ENST00000394597 FAM83AQ86UY5 434 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 CCDC197Q8NCU1 140 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 ACRBPQ8NEB7 543 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 ENOX1Q8TC92 643 aaKnown RBP6.19□□□□□ -1.42
RFFL-202ENST00000394597 LPAR1Q92633 364 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 DHTKD1Q96HY7 919 aaPredicted RBP6.19□□□□□ -1.42
RFFL-202ENST00000394597 FAM210AQ96ND0 272 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 AZI2Q9H6S1 392 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 VIPAS39Q9H9C1 493 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 RAVER2Q9HCJ3 691 aaKnown RBP6.19□□□□□ -1.42
RFFL-202ENST00000394597 HAUS2Q9NVX0 235 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 MYO1AQ9UBC5 1043 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 EXOC7Q9UPT5 735 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 KLRG2A4D1S0 409 aaPredicted RBP6.19□□□□□ -1.42
RFFL-202ENST00000394597 ANKRD62A6NC57 917 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 KCNJ18B7U540 433 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 UBE2Q2LH0YL09 131 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 CTNND1O60716 968 aaKnown RBP6.19□□□□□ -1.42
RFFL-202ENST00000394597 HOXA7P31268 230 aaPredicted RBP6.19□□□□□ -1.42
RFFL-202ENST00000394597 SHMT1P34896 483 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 PRPHP41219 470 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 KCNJ12Q14500 433 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 SETDB1Q15047 1291 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 FAM26FQ5R3K3 315 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 RNF207Q6ZRF8 634 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 VSIG1Q86XK7 387 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 CCDC51Q96ER9 411 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 FAM20AQ96MK3 541 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 HACL1Q9UJ83 578 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 PCDHB13Q9Y5F0 798 aa6.19□□□□□ -1.42
RFFL-202ENST00000394597 PLCH1Q4KWH8 1693 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 ESYT2A0FGR8 921 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 WDR46O15213 610 aaKnown RBP6.18□□□□□ -1.42
RFFL-202ENST00000394597 GNA14O95837 355 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 FGRP09769 529 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 CASP14P31944 242 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 CTNNA1P35221 906 aaKnown RBP6.18□□□□□ -1.42
RFFL-202ENST00000394597 CAP2P40123 477 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 SLC8A3P57103 927 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 PRPF4BQ13523 1007 aaKnown RBP6.18□□□□□ -1.42
RFFL-202ENST00000394597 KCTD2Q14681 263 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 ALS2CLQ60I27 953 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 LDHDQ86WU2 507 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 ZKSCAN4Q969J2 545 aaPredicted RBP6.18□□□□□ -1.42
RFFL-202ENST00000394597 CDHR1Q96JP9 859 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 NACC1Q96RE7 527 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 PNKPQ96T60 521 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 MLXIPQ9HAP2 919 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 POLD4Q9HCU8 107 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 ADD3Q9UEY8 706 aaKnown RBP6.18□□□□□ -1.42
RFFL-202ENST00000394597 PRR12Q9ULL5 1215 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 C19orf81C9J6K1 198 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 SMIM22K7EJ46 135 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 CCND2P30279 289 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 CCNA1P78396 465 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 CUL3Q13618 768 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 LAMB3Q13751 1172 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 COL9A3Q14050 684 aaPredicted RBP6.18□□□□□ -1.42
RFFL-202ENST00000394597 MAP7Q14244 749 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 PKN1Q16512 942 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 SPDYE2Q495Y8 402 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 FAM133BQ5BKY9 247 aaKnown RBP6.18□□□□□ -1.42
RFFL-202ENST00000394597 DCAF17Q5H9S7 520 aaPredicted RBP6.18□□□□□ -1.42
RFFL-202ENST00000394597 NLRP14Q86W24 1093 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 DAGLBQ8NCG7 672 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 NSMCE1Q8WV22 266 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 KLHL29Q96CT2 875 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 IWS1Q96ST2 819 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.18□□□□□ -1.42
RFFL-202ENST00000394597 IQCA1LA6NCM1 817 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 TDP2O95551 362 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 PLA2G4BP0C869 781 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 DESP17661 470 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 EIF2AK2P19525 551 aaKnown RBP6.18□□□□□ -1.42
RFFL-202ENST00000394597 C2orf54Q08AI8 447 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 PDIA5Q14554 519 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 XKR9Q5GH70 373 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 C6orf163Q5TEZ5 329 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 FKBP1CQ5VVH2 108 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 CYB5D1Q6P9G0 228 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 CCDC84Q86UT8 332 aaPredicted RBP6.18□□□□□ -1.42
RFFL-202ENST00000394597 RPAP3Q9H6T3 665 aaPredicted RBP6.18□□□□□ -1.42
RFFL-202ENST00000394597 SLC5A4Q9NY91 659 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 LARSQ9P2J5 1176 aaKnown RBP6.18□□□□□ -1.42
RFFL-202ENST00000394597 EPN1Q9Y6I3 576 aaPredicted RBP6.18□□□□□ -1.42
RFFL-202ENST00000394597 NWD2Q9ULI1 1742 aa6.18□□□□□ -1.42
RFFL-202ENST00000394597 COL22A1Q8NFW1 1626 aaPredicted RBP6.18□□□□□ -1.42
RFFL-202ENST00000394597 FOXP2O15409 715 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 GRIN3BO60391 1043 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 DIAPH2O60879 1101 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 RPS6KA5O75582 802 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 PDHA1P08559 390 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 GSCP56915 257 aaPredicted RBP6.17□□□□□ -1.42
RFFL-202ENST00000394597 GUCY1A3Q02108 690 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms