RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 MS4A14Q96JA4 679 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 OSBPL9Q96SU4 736 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 REEP2Q9BRK0 252 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 TCHPQ9BT92 498 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 ZNF277Q9NRM2 450 aaPredicted RBP11.49□□□□□ -0.57
CALD1-203ENST00000393118 LARSQ9P2J5 1176 aaKnown RBP11.49□□□□□ -0.57
CALD1-203ENST00000393118 NID2Q14112 1375 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 TUBGCP6Q96RT7 1819 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 KRIT1O00522 736 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 NMT1P30419 496 aaKnown RBP11.49□□□□□ -0.57
CALD1-203ENST00000393118 USP14P54578 494 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 SLC35G1Q2M3R5 365 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 CENPPQ6IPU0 288 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 CCDC25Q86WR0 208 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 RIN2Q8WYP3 895 aaPredicted RBP11.49□□□□□ -0.57
CALD1-203ENST00000393118 EIF2AK1Q9BQI3 630 aaKnown RBP11.49□□□□□ -0.57
CALD1-203ENST00000393118 STK24Q9Y6E0 443 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 SPATA31A6Q5VVP1 1343 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 LRP6O75581 1613 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 SPOPO43791 374 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 N4BP1O75113 896 aaKnown RBP11.49□□□□□ -0.57
CALD1-203ENST00000393118 PPFIA4O75335 1185 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 MED24O75448 989 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 EIF2AK2P19525 551 aaKnown RBP11.49□□□□□ -0.57
CALD1-203ENST00000393118 PSMC2P35998 433 aaKnown RBP11.49□□□□□ -0.57
CALD1-203ENST00000393118 XKR9Q5GH70 373 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 STRIP1Q5VSL9 837 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 PPP4R3AQ6IN85 833 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 FOXR1Q6PIV2 292 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 KSR1Q8IVT5 923 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 CABS1Q96KC9 395 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 ERGIC2Q96RQ1 377 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 DPH5Q9H2P9 285 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 CAPN6Q9Y6Q1 641 aa11.49□□□□□ -0.57
CALD1-203ENST00000393118 MYBP10242 640 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 ECE1P42892 770 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 CATSPER3Q86XQ3 398 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 PPM1KQ8N3J5 372 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 CYP2W1Q8TAV3 490 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 CEP63Q96MT8 703 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 AP1M1Q9BXS5 423 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 GOLPH3Q9H4A6 298 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 ABCB11O95342 1321 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 GSTTP1A0A1W2PQM5 241 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 RSPH10B2B2RC85 870 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 RSPH10BP0C881 870 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 SLC9A1P19634 815 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 BIRC3Q13489 604 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 COG1Q8WTW3 980 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 FAM163AQ96GL9 167 aaPredicted RBP11.48□□□□□ -0.57
CALD1-203ENST00000393118 ZNF341Q9BYN7 854 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 MED4Q9NPJ6 270 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 PRR12Q9ULL5 1215 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 ANO9A1A5B4 782 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 SASH3O75995 380 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 TRIM49P0CI25 452 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 TRIM49CP0CI26 452 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 ACTN3Q08043 901 aaPredicted RBP11.48□□□□□ -0.57
CALD1-203ENST00000393118 APOBEC3HQ6NTF7 200 aaKnown RBP11.48□□□□□ -0.57
CALD1-203ENST00000393118 RSRC2Q7L4I2 434 aaKnown RBP11.48□□□□□ -0.57
CALD1-203ENST00000393118 DNAAF5Q86Y56 855 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 PRMT6Q96LA8 375 aaPredicted RBP11.48□□□□□ -0.57
CALD1-203ENST00000393118 FAM20AQ96MK3 541 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 NACC1Q96RE7 527 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 LRRC1Q9BTT6 524 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 MMTAG2Q9BU76 263 aaKnown RBP11.48□□□□□ -0.57
CALD1-203ENST00000393118 FUT8Q9BYC5 575 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 NYAP2Q9P242 653 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 ARHGAP20Q9P2F6 1191 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 PLAGL2Q9UPG8 496 aa11.48□□□□□ -0.57
CALD1-203ENST00000393118 CYP11B2P19099 503 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 SMTNP53814 917 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 PSMC6P62333 389 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 SPATA4Q8NEY3 305 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 HOOK2Q96ED9 719 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 CALR3Q96L12 384 aaKnown RBP11.47□□□□□ -0.57
CALD1-203ENST00000393118 AMFRQ9UKV5 643 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 NFU1Q9UMS0 254 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 SNX12Q9UMY4 172 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 PSMD14O00487 310 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 DLATP10515 647 aaKnown RBP11.47□□□□□ -0.57
CALD1-203ENST00000393118 PBX1P40424 430 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 ARHGAP25P42331 645 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 SEMA3FQ13275 785 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 CCDC26Q8TAB7 109 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 ACER1Q8TDN7 264 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 GOLGA8IPA6NC78 632 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 GOLGA8JA6NMD2 632 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 BCRP11274 1271 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 MYL7Q01449 175 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 ZC2HC1CQ53FD0 456 aaPredicted RBP11.47□□□□□ -0.57
CALD1-203ENST00000393118 APTXQ7Z2E3 356 aaKnown RBP11.47□□□□□ -0.57
CALD1-203ENST00000393118 ANKZF1Q9H8Y5 726 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 FBXO28Q9NVF7 368 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 DONSONQ9NYP3 566 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.47□□□□□ -0.57
CALD1-203ENST00000393118 FAM169AQ9Y6X4 670 aa11.47□□□□□ -0.57
CALD1-203ENST00000393118 EPHB6O15197 1021 aa11.46□□□□□ -0.57
CALD1-203ENST00000393118 POTEJP0CG39 1038 aa11.46□□□□□ -0.57
CALD1-203ENST00000393118 B4GALNT4Q76KP1 1039 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms