RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 RBPJLQ9UBG7 517 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 SEL1LQ9UBV2 794 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 FAM13AO94988 1023 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 ERCC3P19447 782 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 ICAM3P32942 547 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 DNM2P50570 870 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 CASP5P51878 434 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 CNTN2Q02246 1040 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 EDRF1Q3B7T1 1238 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 PPFIBP1Q86W92 1011 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 ZC3H3Q8IXZ2 948 aaKnown RBP12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 GTF3C2Q8WUA4 911 aaPredicted RBP12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 CEP63Q96MT8 703 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 ZNF408Q9H9D4 720 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 PARVGQ9HBI0 331 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 TXNRD2Q9NNW7 524 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 PCDHA10Q9Y5I2 948 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 AKR1B15C9JRZ8 316 aaPredicted RBP12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 EDNRBP24530 442 aa12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 MTIF2P46199 727 aaKnown RBP12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 TMEM139Q8IV31 216 aa12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 FAM133AQ8N9E0 248 aa12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 EEF2KMTQ96G04 330 aa12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 MRPL44Q9H9J2 332 aaKnown RBP12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 PNMA3Q9UL41 463 aa12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 POTEB2H3BUK9 544 aa12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 EIF3DO15371 548 aaKnown RBP eCLIP12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 YWHABP31946 246 aaKnown RBP12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 RARRES1P49788 294 aa12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 ADKP55263 362 aaKnown RBP12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 RBL2Q08999 1139 aa12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 KNOP1Q1ED39 458 aaKnown RBP12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 MIIPQ5JXC2 388 aa12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 PADI6Q6TGC4 694 aa12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 NELFCDQ8IXH7 590 aa12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 PANX2Q96RD6 677 aa12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 NOC4LQ9BVI4 516 aaKnown RBP12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 JPH1Q9HDC5 661 aaPredicted RBP12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 TRAF3IP3Q9Y228 551 aa12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 SLC45A1Q9Y2W3 748 aa12.66□□□□□ -0.38
SMARCAL1-203ENST00000392128 ARID2Q68CP9 1835 aa12.65□□□□□ -0.38
SMARCAL1-203ENST00000392128 B4DLN1 442 aa12.65□□□□□ -0.38
SMARCAL1-203ENST00000392128 GNA14O95837 355 aa12.65□□□□□ -0.38
SMARCAL1-203ENST00000392128 GYPCP04921 128 aa12.65□□□□□ -0.38
SMARCAL1-203ENST00000392128 TPM1P09493 284 aa12.65□□□□□ -0.38
SMARCAL1-203ENST00000392128 MYBP10242 640 aa12.65□□□□□ -0.38
SMARCAL1-203ENST00000392128 GOLGA8FQ08AF8 430 aa12.65□□□□□ -0.38
SMARCAL1-203ENST00000392128 GOLGA8DPQ0D2H9 430 aa12.65□□□□□ -0.38
SMARCAL1-203ENST00000392128 UGCGQ16739 394 aa12.65□□□□□ -0.38
SMARCAL1-203ENST00000392128 CEP135Q66GS9 1140 aa12.65□□□□□ -0.38
SMARCAL1-203ENST00000392128 CNGA4Q8IV77 575 aa12.65□□□□□ -0.38
SMARCAL1-203ENST00000392128 MYCT1Q8N699 235 aa12.65□□□□□ -0.38
SMARCAL1-203ENST00000392128 TIPINQ9BVW5 301 aa12.65□□□□□ -0.38
SMARCAL1-203ENST00000392128 RRAGCQ9HB90 399 aa12.65□□□□□ -0.38
SMARCAL1-203ENST00000392128 GBA2Q9HCG7 927 aaPredicted RBP12.65□□□□□ -0.38
SMARCAL1-203ENST00000392128 ANKEF1Q9NU02 776 aa12.65□□□□□ -0.38
SMARCAL1-203ENST00000392128 SLC9A2Q9UBY0 812 aa12.65□□□□□ -0.38
SMARCAL1-203ENST00000392128 UBE4BO95155 1302 aa12.65□□□□□ -0.38
SMARCAL1-203ENST00000392128 ZNFX1Q9P2E3 1918 aaKnown RBP12.65□□□□□ -0.38
SMARCAL1-203ENST00000392128 SOWAHBA6NEL2 793 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 PDXKO00764 312 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 STX10O60499 249 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 DKC1O60832 514 aaKnown RBP eCLIP12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 MFAP3LO75121 409 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 GCNT3O95395 438 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 CETPP11597 493 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 HOXD13P35453 343 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 GTF2A2P52657 109 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 MARSP56192 900 aaKnown RBP12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 MAPK7Q13164 816 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 MAN2A1Q16706 1144 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 SHCBP1Q8NEM2 672 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 CCDC51Q96ER9 411 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 MS4A4AQ96JQ5 239 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 FIZ1Q96SL8 496 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 BAG1Q99933 345 aaPredicted RBP12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 MROH8Q9H579 483 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 A0A0U1RQG5 324 aaPredicted RBP12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 SFI1A8K8P3 1242 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 ARHGAP6O43182 974 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 PSAPP07602 524 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 CASP14P31944 242 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 Q3C1V9 767 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 VWA3BQ502W6 1294 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 CCAR2Q8N163 923 aaKnown RBP12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 ERGIC2Q96RQ1 377 aa12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 TYW1Q9NV66 732 aaKnown RBP12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 MYH9P35579 1960 aaKnown RBP12.64□□□□□ -0.39
SMARCAL1-203ENST00000392128 PES1O00541 588 aaKnown RBP12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 CALUO43852 315 aaPredicted RBP12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 HIP1RO75146 1068 aa12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 PRPF6O94906 941 aaKnown RBP12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 ERVK-9P63128 1117 aa12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 ERVK-24P63145 666 aa12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 FSTL1Q12841 308 aa12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 E4F1Q66K89 784 aaPredicted RBP12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 STXBP4Q6ZWJ1 553 aa12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 DAW1Q8N136 415 aa12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 ATP6V0A1Q93050 837 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms