RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 PPFIA4O75335 1185 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 CDC45O75419 566 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 RPS6KA4O75676 772 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 FARP2O94887 1054 aaPredicted RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 CAMTA2O94983 1202 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 FAM13AO94988 1023 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 LUC7L3O95232 432 aaKnown RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 ECEL1O95672 775 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 PCCAP05165 728 aaPredicted RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 CTSBP07858 339 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 EDN3P14138 238 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 TCF3P15923 654 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 H2AFXP16104 143 aaPredicted RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 ZFXP17010 805 aaPredicted RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 DESP17661 470 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 CASTP20810 708 aaKnown RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 MPSTP25325 297 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 HNRNPH1P31943 449 aaKnown RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 RFC4P35249 363 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 COPB2P35606 906 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 ARHGAP25P42331 645 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 RANBP1P43487 201 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 ASPAP45381 313 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 PDE1AP54750 535 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 CASP7P55210 303 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 CYP27A1Q02318 531 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 DEUP1Q05D60 604 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 FOXD4Q12950 439 aaPredicted RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 IFT88Q13099 833 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 CDK5R2Q13319 367 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 IFIT5Q13325 482 aaKnown RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 DYNC1I2Q13409 638 aaKnown RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 SMC1AQ14683 1233 aaKnown RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 NAA25Q14CX7 972 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 ENOX2Q16206 610 aaKnown RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 HLFQ16534 295 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 SLC4A8Q2Y0W8 1093 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 RABL6Q3YEC7 729 aaPredicted RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 PREPLQ4J6C6 727 aaPredicted RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 BMP2KLQ5H9B9 411 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 EPHA10Q5JZY3 1008 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 TTC22Q5TAA0 569 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 USPL1Q5W0Q7 1092 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 SLC30A9Q6PML9 568 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 LMBR1LQ6UX01 489 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 CLEC4GQ6UXB4 293 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 CCDC73Q6ZRK6 1079 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 PTF1AQ7RTS3 328 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 LUZP1Q86V48 1076 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 NLRP10Q86W26 655 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 NPAS4Q8IUM7 802 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 CCDC65Q8IXS2 484 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 DRC7Q8IY82 874 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 CCDC170Q8IYT3 715 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 ZNF34Q8IZ26 560 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 CNTROBQ8N137 903 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 PLD6Q8N2A8 252 aaKnown RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 FAM76AQ8TAV0 307 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 KLHDC4Q8TBB5 520 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 WDR66Q8TBY9 1149 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 LZICQ8WZA0 190 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 UBXN4Q92575 508 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 GATA6Q92908 595 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 PMEPA1Q969W9 287 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 RILPL2Q969X0 211 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 FAM89AQ96GI7 184 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 KAZALD1Q96I82 304 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 ASB16Q96NS5 453 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 AGAP3Q96P47 875 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 SLC38A3Q99624 504 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 JPH2Q9BR39 696 aaPredicted RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 PLA2G12BQ9BX93 195 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 TRIM4Q9C037 500 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 NYXQ9GZU5 481 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 TTC12Q9H892 705 aaPredicted RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 IL1RAPL2Q9NP60 686 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 LUC7LQ9NQ29 371 aaKnown RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 COPRSQ9NQ92 184 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 FAM105AQ9NUU6 356 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 TUBA8Q9NY65 449 aaPredicted RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 RGL1Q9NZL6 768 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 NARFQ9UHQ1 456 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 LCMT1Q9UIC8 334 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 POLIQ9UNA4 740 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 CARMIL3Q8ND23 1372 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 COL4A1P02462 1669 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 USP42Q9H9J4 1324 aaKnown RBP2.93□□□□□ -1.94
TRAV41-201ENST00000390468 RIC1Q4ADV7 1423 aa2.93□□□□□ -1.94
TRAV41-201ENST00000390468 BAZ2BQ9UIF8 2168 aaKnown RBP2.93□□□□□ -1.94
TRAV41-201ENST00000390468 GOLGA6L4A6NEF3 574 aa2.93□□□□□ -1.94
TRAV41-201ENST00000390468 A6NNZ2 444 aa2.93□□□□□ -1.94
TRAV41-201ENST00000390468 EYA2O00167 538 aa2.93□□□□□ -1.94
TRAV41-201ENST00000390468 EBAG9O00559 213 aa2.93□□□□□ -1.94
TRAV41-201ENST00000390468 CREB3O43889 395 aa2.93□□□□□ -1.94
TRAV41-201ENST00000390468 MARCH6O60337 910 aa2.93□□□□□ -1.94
TRAV41-201ENST00000390468 TNFRSF21O75509 655 aa2.93□□□□□ -1.94
TRAV41-201ENST00000390468 GLRX3O76003 335 aaKnown RBP2.93□□□□□ -1.94
TRAV41-201ENST00000390468 KRT38O76015 456 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms