RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 SNX1Q13596 522 aa17.46■□□□□ 0.38
PTPRN2-201ENST00000389413 TRIM10Q9UDY6 481 aa17.46■□□□□ 0.38
PTPRN2-201ENST00000389413 ANKRD65E5RJM6 399 aa17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 PSMD14O00487 310 aa17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 RASGRF2O14827 1237 aa17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 USP11P51784 963 aa17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 LLGL1Q15334 1064 aa17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 QRICH1Q2TAL8 776 aa17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 FBXO33Q7Z6M2 555 aa17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 FAM160B2Q86V87 743 aa17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 GH2P01242 217 aa17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 RUBCNQ92622 972 aa17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 PCDHB4Q9Y5E5 795 aa17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 MIF4GDA9UHW6 222 aaKnown RBP17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 H2AFXP16104 143 aaPredicted RBP17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 IL9RQ01113 521 aa17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 TMEM60Q9H2L4 133 aa17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 PDS5AQ29RF7 1337 aaKnown RBP17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 ZNF185O15231 689 aa17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 CRKP46108 304 aa17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 SLCO1A2P46721 670 aa17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 CACNB3P54284 484 aa17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 RCSD1Q6JBY9 416 aa17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 LRRC1Q9BTT6 524 aa17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 ACTR5Q9H9F9 607 aaPredicted RBP17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 ANKFY1Q9P2R3 1169 aa17.45■□□□□ 0.38
PTPRN2-201ENST00000389413 SSU72P8A0A1W2PR75 194 aa17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 STXBP3O00186 592 aa17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 TNNC2P02585 160 aa17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 AKR1B1P15121 316 aa17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 DCAF15Q66K64 600 aa17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 ZNF354CQ86Y25 554 aa17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 CEP170P1Q96L14 293 aa17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 ANAPC5Q9UJX4 755 aa17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 PODXLO00592 558 aa17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 SORBS3O60504 671 aa17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 HIP1RO75146 1068 aa17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 GPSM2P81274 684 aa17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 PPP2R5AQ15172 486 aa17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 C6orf118Q5T5N4 469 aa17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 ILDR1Q86SU0 546 aaPredicted RBP17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 SALL1Q9NSC2 1324 aa17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 TADA2BQ86TJ2 420 aa17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 CCDC110Q8TBZ0 833 aa17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 SEPT9Q9UHD8 586 aaPredicted RBP17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 TRPC5Q9UL62 973 aaPredicted RBP17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 GINS2Q9Y248 185 aa17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.44■□□□□ 0.38
PTPRN2-201ENST00000389413 SART1O43290 800 aaKnown RBP17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 TMEM191BP0C7N4 346 aa17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 CD44P16070 742 aaKnown RBP17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 HSPA1LP34931 641 aa17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 RWDD2BP57060 319 aa17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 ANKRD35Q8N283 1001 aa17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 LRRC8CQ8TDW0 803 aa17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 HNRNPLLQ8WVV9 542 aaKnown RBP17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.43■□□□□ 0.384e-6■□□□□ 11.2
PTPRN2-201ENST00000389413 TAF1DQ9H5J8 278 aaPredicted RBP17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 MRPL47Q9HD33 250 aaKnown RBP17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 POC1B-GALNT4F8VUJ3 575 aa17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 PRKG1Q13976 671 aa17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 NRBP2Q9NSY0 501 aa17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 STAT3P40763 770 aa17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 ADCY2Q08462 1091 aa17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 PPP1R2P3Q6NXS1 205 aa17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 CCNI2Q6ZMN8 369 aaPredicted RBP17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 TACO1Q9BSH4 297 aaKnown RBP17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 MTMR4Q9NYA4 1195 aa17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 PACSIN2Q9UNF0 486 aaPredicted RBP17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 SYNGAP1Q96PV0 1343 aa17.43■□□□□ 0.38
PTPRN2-201ENST00000389413 DAPK3O43293 454 aa17.42■□□□□ 0.38
PTPRN2-201ENST00000389413 RNF8O76064 485 aa17.42■□□□□ 0.38
PTPRN2-201ENST00000389413 ADRA2BP18089 450 aa17.42■□□□□ 0.38
PTPRN2-201ENST00000389413 CASC4Q6P4E1 433 aa17.42■□□□□ 0.38
PTPRN2-201ENST00000389413 FRMD5Q7Z6J6 570 aa17.42■□□□□ 0.38
PTPRN2-201ENST00000389413 DDX47Q9H0S4 455 aaKnown RBP17.42■□□□□ 0.38
PTPRN2-201ENST00000389413 SUGCTQ9HAC7 445 aa17.42■□□□□ 0.38
PTPRN2-201ENST00000389413 MYMKA6NI61 221 aa17.42■□□□□ 0.38
PTPRN2-201ENST00000389413 FGFR2P21802 821 aa17.42■□□□□ 0.38
PTPRN2-201ENST00000389413 PRELPP51888 382 aa17.42■□□□□ 0.38
PTPRN2-201ENST00000389413 ARHGEF18Q6ZSZ5 1173 aa17.42■□□□□ 0.38
PTPRN2-201ENST00000389413 POLD4Q9HCU8 107 aa17.42■□□□□ 0.38
PTPRN2-201ENST00000389413 SNX24Q9Y343 169 aa17.42■□□□□ 0.38
PTPRN2-201ENST00000389413 RASA3Q14644 834 aa17.42■□□□□ 0.38
PTPRN2-201ENST00000389413 NOA1Q8NC60 698 aaKnown RBP17.42■□□□□ 0.38
PTPRN2-201ENST00000389413 NWD1Q149M9 1564 aa17.42■□□□□ 0.38
PTPRN2-201ENST00000389413 SLC7A3Q8WY07 619 aa17.42■□□□□ 0.38
PTPRN2-201ENST00000389413 A0A1W2PQJ5 194 aa17.41■□□□□ 0.38
PTPRN2-201ENST00000389413 FAM196BA6NMK8 535 aa17.41■□□□□ 0.38
PTPRN2-201ENST00000389413 F5H6K3 240 aa17.41■□□□□ 0.38
PTPRN2-201ENST00000389413 RASA1P20936 1047 aa17.41■□□□□ 0.38
PTPRN2-201ENST00000389413 KLRC3Q07444 240 aa17.41■□□□□ 0.38
PTPRN2-201ENST00000389413 SLC18A3Q16572 532 aa17.41■□□□□ 0.38
PTPRN2-201ENST00000389413 CYP4F22Q6NT55 531 aa17.41■□□□□ 0.38
PTPRN2-201ENST00000389413 SEL1LQ9UBV2 794 aa17.41■□□□□ 0.38
PTPRN2-201ENST00000389413 GOLGA8IPA6NC78 632 aa17.41■□□□□ 0.38
PTPRN2-201ENST00000389413 GOLGA8JA6NMD2 632 aa17.41■□□□□ 0.38
PTPRN2-201ENST00000389413 TMOD1P28289 359 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms