RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 ANKRD35Q8N283 1001 aa11.22□□□□□ -0.61
LTN1-203ENST00000389195 CCDC112Q8NEF3 446 aa11.22□□□□□ -0.61
LTN1-203ENST00000389195 PPP1R13LQ8WUF5 828 aa11.22□□□□□ -0.61
LTN1-203ENST00000389195 ZNF668Q96K58 619 aaPredicted RBP11.22□□□□□ -0.61
LTN1-203ENST00000389195 AS3MTQ9HBK9 375 aa11.22□□□□□ -0.61
LTN1-203ENST00000389195 CYP39A1Q9NYL5 469 aa11.22□□□□□ -0.61
LTN1-203ENST00000389195 REXO2Q9Y3B8 237 aaKnown RBP11.22□□□□□ -0.61
LTN1-203ENST00000389195 EPHX2P34913 555 aa11.22□□□□□ -0.61
LTN1-203ENST00000389195 PADI6Q6TGC4 694 aa11.22□□□□□ -0.61
LTN1-203ENST00000389195 RRAGAQ7L523 313 aa11.22□□□□□ -0.61
LTN1-203ENST00000389195 CDCA5Q96FF9 252 aa11.22□□□□□ -0.61
LTN1-203ENST00000389195 NAP1L4Q99733 375 aaKnown RBP11.22□□□□□ -0.61
LTN1-203ENST00000389195 JADE2Q9NQC1 790 aa11.22□□□□□ -0.61
LTN1-203ENST00000389195 SYNPO2Q9UMS6 1093 aa11.22□□□□□ -0.61
LTN1-203ENST00000389195 UBIAD1Q9Y5Z9 338 aa11.22□□□□□ -0.61
LTN1-203ENST00000389195 CSADQ9Y600 493 aa11.22□□□□□ -0.61
LTN1-203ENST00000389195 ENC1O14682 589 aa11.21□□□□□ -0.61
LTN1-203ENST00000389195 TGFB1I1O43294 461 aa11.21□□□□□ -0.61
LTN1-203ENST00000389195 PPP1R12BO60237 982 aaPredicted RBP11.21□□□□□ -0.61
LTN1-203ENST00000389195 SLC9A1P19634 815 aa11.21□□□□□ -0.61
LTN1-203ENST00000389195 FKBP3Q00688 224 aaKnown RBP11.21□□□□□ -0.61
LTN1-203ENST00000389195 SPAG1Q07617 926 aa11.21□□□□□ -0.61
LTN1-203ENST00000389195 PCNX4Q63HM2 1172 aa11.21□□□□□ -0.61
LTN1-203ENST00000389195 SWSAP1Q6NVH7 229 aa11.21□□□□□ -0.61
LTN1-203ENST00000389195 CYFIP1Q7L576 1253 aa11.21□□□□□ -0.61
LTN1-203ENST00000389195 MCF2L2Q86YR7 1114 aa11.21□□□□□ -0.61
LTN1-203ENST00000389195 POLR3CQ9BUI4 534 aaPredicted RBP11.21□□□□□ -0.61
LTN1-203ENST00000389195 GUCA1BQ9UMX6 200 aa11.21□□□□□ -0.61
LTN1-203ENST00000389195 PAXBP1Q9Y5B6 917 aa11.21□□□□□ -0.61
LTN1-203ENST00000389195 RPTORQ8N122 1335 aa11.21□□□□□ -0.62
LTN1-203ENST00000389195 ARHGEF35A5YM69 484 aa11.21□□□□□ -0.62
LTN1-203ENST00000389195 DNM2P50570 870 aa11.21□□□□□ -0.62
LTN1-203ENST00000389195 PTPROQ16827 1216 aa11.21□□□□□ -0.62
LTN1-203ENST00000389195 CT47A1Q5JQC4 288 aaPredicted RBP11.21□□□□□ -0.62
LTN1-203ENST00000389195 HINFPQ9BQA5 517 aa11.21□□□□□ -0.62
LTN1-203ENST00000389195 COL4A3BPQ9Y5P4 624 aa11.21□□□□□ -0.62
LTN1-203ENST00000389195 GOLGA8IPA6NC78 632 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 LRRC53A6NM62 1247 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 GOLGA8JA6NMD2 632 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 NRDCO43847 1150 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 ZNF862O60290 1169 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 TRIM49P0CI25 452 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 TRIM49CP0CI26 452 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 YWHABP31946 246 aaKnown RBP11.2□□□□□ -0.62
LTN1-203ENST00000389195 GJA5P36382 358 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 KNOP1Q1ED39 458 aaKnown RBP11.2□□□□□ -0.62
LTN1-203ENST00000389195 B3GNT9Q6UX72 402 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 FAM178BQ8IXR5 827 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 KIF18AQ8NI77 898 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 OPTNQ96CV9 577 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 PANX2Q96RD6 677 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 FIZ1Q96SL8 496 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 TEX13BQ9BXU2 312 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 LACRTQ9GZZ8 138 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 GABBR1Q9UBS5 961 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 TCEAL9Q9UHQ7 104 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.2□□□□□ -0.62
LTN1-203ENST00000389195 RLFQ13129 1914 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 FRMD3A2A2Y4 597 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 SLC16A4O15374 487 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 PEX3P56589 373 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 POLR2FP61218 127 aaKnown RBP11.2□□□□□ -0.62
LTN1-203ENST00000389195 ETF1P62495 437 aaKnown RBP11.2□□□□□ -0.62
LTN1-203ENST00000389195 XKR9Q5GH70 373 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 ZNF569Q5MCW4 686 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 GJC2Q5T442 439 aaPredicted RBP11.2□□□□□ -0.62
LTN1-203ENST00000389195 FAM102BQ5T8I3 360 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 ANO5Q75V66 913 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 VSIG10LQ86VR7 867 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 CNGA4Q8IV77 575 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 OR8K1Q8NGG5 319 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 TSG101Q99816 390 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 AJAP1Q9UKB5 411 aaPredicted RBP11.2□□□□□ -0.62
LTN1-203ENST00000389195 SIK3Q9Y2K2 1263 aa11.2□□□□□ -0.62
LTN1-203ENST00000389195 KIAA1217Q5T5P2 1943 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 ZNF263O14978 683 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 TPM1P09493 284 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 RARRES1P49788 294 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 KCNH2Q12809 1159 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 MAPK7Q13164 816 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 EPHA7Q15375 998 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 DPY19L2Q6NUT2 758 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 DRC1Q96MC2 740 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 NACC1Q96RE7 527 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 TTYH3Q9C0H2 523 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 ASCC2Q9H1I8 757 aaPredicted RBP11.19□□□□□ -0.62
LTN1-203ENST00000389195 PARVGQ9HBI0 331 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 HDAC6Q9UBN7 1215 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.19□□□□□ -0.62
LTN1-203ENST00000389195 NOL4O94818 638 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 NR3C1P04150 777 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 CCDC175P0C221 793 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 DLG4P78352 724 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 LRRC63Q05C16 580 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 PSMD2Q13200 908 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 MAN2A1Q16706 1144 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 LY6KQ17RY6 165 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 ERCC6LQ2NKX8 1250 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 FKBP15Q5T1M5 1219 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 CCDC60Q8IWA6 550 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms