RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 SPICE1Q8N0Z3 855 aa16.42■□□□□ 0.22
SCFD2-201ENST00000388940 ANKRD13CQ8N6S4 541 aa16.42■□□□□ 0.22
SCFD2-201ENST00000388940 CHURC1Q8WUH1 139 aa16.42■□□□□ 0.22
SCFD2-201ENST00000388940 SLC5A5Q92911 643 aa16.42■□□□□ 0.22
SCFD2-201ENST00000388940 DRC1Q96MC2 740 aa16.42■□□□□ 0.22
SCFD2-201ENST00000388940 ASTN1O14525 1302 aa16.42■□□□□ 0.22
SCFD2-201ENST00000388940 SPDYE2BA6NHP3 402 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 GCOM1H8Y6P7 765 aaPredicted RBP16.41■□□□□ 0.22
SCFD2-201ENST00000388940 PPIP5K2O43314 1243 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 N4BP1O75113 896 aaKnown RBP16.41■□□□□ 0.22
SCFD2-201ENST00000388940 NR3C1P04150 777 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 POLR2MP0CAP2 368 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 SPDYE6P0CI01 402 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 XRCC5P13010 732 aaKnown RBP16.41■□□□□ 0.22
SCFD2-201ENST00000388940 CYP4A11Q02928 519 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 KIAA1755Q5JYT7 1200 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 IRF2BP2Q7Z5L9 587 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 WDR18Q9BV38 432 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 HPCAL4Q9UM19 191 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 PCDHGC5Q9Y5F6 944 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 LOXHD1Q8IVV2 1947 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 ATP8B3O60423 1300 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 A0A087X0T9 212 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 GTPBP10A4D1E9 387 aaKnown RBP16.41■□□□□ 0.22
SCFD2-201ENST00000388940 RSPH10B2B2RC85 870 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 AKAP3O75969 853 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 SLITRK3O94933 977 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 FAM228BP0C875 321 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 RSPH10BP0C881 870 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 UCHL3P15374 230 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 TAL1P17542 331 aaPredicted RBP16.41■□□□□ 0.22
SCFD2-201ENST00000388940 PON1P27169 355 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 APBA1Q02410 837 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 EPHA7Q15375 998 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 EXOC3L4Q17RC7 722 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 GLE1Q53GS7 698 aaKnown RBP16.41■□□□□ 0.22
SCFD2-201ENST00000388940 C1orf186Q6ZWK4 172 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 FAM133AQ8N9E0 248 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 EHMT1Q9H9B1 1298 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 RGL1Q9NZL6 768 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 VPS18Q9P253 973 aa16.41■□□□□ 0.22
SCFD2-201ENST00000388940 ERICH4A6NGS2 130 aa16.4■□□□□ 0.22
SCFD2-201ENST00000388940 BUB1O43683 1085 aa16.4■□□□□ 0.22
SCFD2-201ENST00000388940 EPB41P11171 864 aaKnown RBP16.4■□□□□ 0.22
SCFD2-201ENST00000388940 SLC9A1P19634 815 aa16.4■□□□□ 0.22
SCFD2-201ENST00000388940 KLRC1P26715 233 aa16.4■□□□□ 0.22
SCFD2-201ENST00000388940 PRKCIP41743 596 aa16.4■□□□□ 0.22
SCFD2-201ENST00000388940 CCDC181Q5TID7 509 aa16.4■□□□□ 0.22
SCFD2-201ENST00000388940 RSBN1LQ6PCB5 846 aaPredicted RBP16.4■□□□□ 0.22
SCFD2-201ENST00000388940 GPIHBP1Q8IV16 184 aa16.4■□□□□ 0.22
SCFD2-201ENST00000388940 ACER1Q8TDN7 264 aa16.4■□□□□ 0.22
SCFD2-201ENST00000388940 AENQ8WTP8 325 aaKnown RBP16.4■□□□□ 0.22
SCFD2-201ENST00000388940 LRRC1Q9BTT6 524 aa16.4■□□□□ 0.22
SCFD2-201ENST00000388940 CALCOCO1Q9P1Z2 691 aa16.4■□□□□ 0.22
SCFD2-201ENST00000388940 ZNF70Q9UC06 446 aaPredicted RBP16.4■□□□□ 0.22
SCFD2-201ENST00000388940 MRPL11Q9Y3B7 192 aaKnown RBP16.4■□□□□ 0.22
SCFD2-201ENST00000388940 ZC3H4Q9UPT8 1303 aaKnown RBP16.4■□□□□ 0.22
SCFD2-201ENST00000388940 TNS1Q9HBL0 1735 aaKnown RBP16.4■□□□□ 0.22
SCFD2-201ENST00000388940 NCK2O43639 380 aa16.39■□□□□ 0.22
SCFD2-201ENST00000388940 TBC1D12O60347 775 aa16.39■□□□□ 0.22
SCFD2-201ENST00000388940 GCNT3O95395 438 aa16.39■□□□□ 0.22
SCFD2-201ENST00000388940 CFBP00751 764 aa16.39■□□□□ 0.22
SCFD2-201ENST00000388940 TNFRSF8P28908 595 aa16.39■□□□□ 0.22
SCFD2-201ENST00000388940 PRELPP51888 382 aa16.39■□□□□ 0.22
SCFD2-201ENST00000388940 CFAP221Q4G0U5 840 aa16.39■□□□□ 0.22
SCFD2-201ENST00000388940 MEI1Q5TIA1 1274 aa16.39■□□□□ 0.22
SCFD2-201ENST00000388940 LRCH2Q5VUJ6 765 aa16.39■□□□□ 0.22
SCFD2-201ENST00000388940 GBP6Q6ZN66 633 aa16.39■□□□□ 0.22
SCFD2-201ENST00000388940 CCDC102AQ96A19 550 aa16.39■□□□□ 0.22
SCFD2-201ENST00000388940 BORCS6Q96GS4 357 aa16.39■□□□□ 0.22
SCFD2-201ENST00000388940 DEFB129Q9H1M3 183 aa16.39■□□□□ 0.22
SCFD2-201ENST00000388940 KCND2Q9NZV8 630 aa16.39■□□□□ 0.22
SCFD2-201ENST00000388940 SEL1LQ9UBV2 794 aa16.39■□□□□ 0.22
SCFD2-201ENST00000388940 ADAMTS1Q9UHI8 967 aa16.39■□□□□ 0.22
SCFD2-201ENST00000388940 ZBTB21Q9ULJ3 1066 aa16.39■□□□□ 0.22
SCFD2-201ENST00000388940 FAN1Q9Y2M0 1017 aa16.39■□□□□ 0.22
SCFD2-201ENST00000388940 UBE4BO95155 1302 aa16.39■□□□□ 0.21
SCFD2-201ENST00000388940 TCP10L2B9ZVM9 353 aa16.39■□□□□ 0.21
SCFD2-201ENST00000388940 TGFB1I1O43294 461 aa16.39■□□□□ 0.21
SCFD2-201ENST00000388940 PALMO75781 387 aa16.39■□□□□ 0.21
SCFD2-201ENST00000388940 VIL1P09327 827 aaKnown RBP16.39■□□□□ 0.21
SCFD2-201ENST00000388940 MYBL2P10244 700 aa16.39■□□□□ 0.21
SCFD2-201ENST00000388940 TNNT3P45378 269 aaPredicted RBP16.39■□□□□ 0.21
SCFD2-201ENST00000388940 GYS2P54840 703 aa16.39■□□□□ 0.21
SCFD2-201ENST00000388940 NAP1L1P55209 391 aaKnown RBP16.39■□□□□ 0.21
SCFD2-201ENST00000388940 FAM160B2Q86V87 743 aa16.39■□□□□ 0.21
SCFD2-201ENST00000388940 SLC35C1Q96A29 364 aa16.39■□□□□ 0.21
SCFD2-201ENST00000388940 GMLQ99445 158 aa16.39■□□□□ 0.21
SCFD2-201ENST00000388940 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.39■□□□□ 0.21
SCFD2-201ENST00000388940 SELENOOQ9BVL4 669 aa16.39■□□□□ 0.21
SCFD2-201ENST00000388940 GRID2IPA4D2P6 1211 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 ZMYND10O75800 440 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 FAM13AO94988 1023 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 SYF2O95926 243 aaKnown RBP16.38■□□□□ 0.21
SCFD2-201ENST00000388940 ACTN1P12814 892 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 CTTNQ14247 550 aaKnown RBP16.38■□□□□ 0.21
SCFD2-201ENST00000388940 KIAA0753Q2KHM9 967 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 FKBP1CQ5VVH2 108 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 DYDC2Q96IM9 177 aa16.38■□□□□ 0.21
SCFD2-201ENST00000388940 SPAG5Q96R06 1193 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms