RNA–Protein interactions for RNA: ENST00000384566.1

RNU6-140P-201, Transcript of RNA, U6 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU6-140P, Length 108 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-140P-201ENST00000384566 ENAHQ8N8S7 591 aaPredicted RBP3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 DIS3LQ8TF46 1054 aaKnown RBP3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 ASB11Q8WXH4 323 aa3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 HPS3Q969F9 1004 aa3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 GJA10Q969M2 543 aa3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 TP53INP1Q96A56 240 aa3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 EVI5LQ96CN4 794 aa3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 ASIC4Q96FT7 647 aa3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 RAX2Q96IS3 184 aa3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 MAP6Q96JE9 813 aa3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 TNIP3Q96KP6 325 aa3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 JMJD8Q96S16 334 aa3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 MAP3K14Q99558 947 aa3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 DBNDD2Q9BQY9 259 aa3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 ANO3Q9BYT9 981 aa3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 CD244Q9BZW8 370 aa3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 SMOC1Q9H4F8 434 aa3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 FAM204AQ9H8W3 233 aa3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 PRDM16Q9HAZ2 1276 aa3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 RC3H2Q9HBD1 1191 aaKnown RBP3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 LRRC4CQ9HCJ2 640 aa3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 PUF60Q9UHX1 559 aaKnown RBP3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 PHTF1Q9UMS5 762 aa3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 RWDD3Q9Y3V2 267 aa3.85□□□□□ -1.79
RNU6-140P-201ENST00000384566 CCDC189A1A4V9 331 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 FAM90A27PA6NNH2 459 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 HMGB1P1B2RPK0 211 aaPredicted RBP3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 TPP1O14773 563 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 HGSO14964 777 aaPredicted RBP3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 SLC27A2O14975 620 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 FOXP2O15409 715 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 GSC2O15499 205 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 CYP26A1O43174 497 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 SH3BP5O60239 455 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 BUB1BO60566 1050 aaPredicted RBP3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 NDUFS2O75306 463 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 TADA3O75528 432 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 PTPN1P18031 435 aaKnown RBP3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 PDE6BP35913 854 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 SLC5A3P53794 718 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 MANFP55145 182 aaKnown RBP3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 ZNF267Q14586 743 aaPredicted RBP3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 RALBP1Q15311 655 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 SEC23AQ15436 765 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 CATSPEREQ5SY80 951 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 STEAP3Q658P3 488 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 LILRA6Q6PI73 481 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 PLD6Q8N2A8 252 aaKnown RBP3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 SHKBP1Q8TBC3 707 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 PHOSPHO1Q8TCT1 267 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 LINC01599Q8WXQ3 324 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 PPM1EQ8WY54 764 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 EAF2Q96CJ1 260 aaPredicted RBP3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 HHIPL1Q96JK4 782 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 MAML3Q96JK9 1138 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 ACO2Q99798 780 aaKnown RBP3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 G6PC3Q9BUM1 346 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 GTPBP4Q9BZE4 634 aaKnown RBP3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 PDGFDQ9GZP0 370 aaPredicted RBP3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 QRSL1Q9H0R6 528 aaKnown RBP3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 WNT8AQ9H1J5 351 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 NLRC4Q9NPP4 1024 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 RIC8BQ9NVN3 520 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 KLHL11Q9NVR0 708 aa3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 ZC3H7BQ9UGR2 993 aaKnown RBP3.84□□□□□ -1.79
RNU6-140P-201ENST00000384566 RNF225M0QZC1 329 aaPredicted RBP3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 WIPF1O43516 503 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 PPFIA4O75335 1185 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 C4BPAP04003 597 aaKnown RBP3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 NTRK1P04629 796 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 CLEC2LP0C7M8 214 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 TMEM253P0C7T8 217 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 OSMP13725 252 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 PDCP20941 246 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 SERPINB3P29508 390 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 CHRNA4P43681 627 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 SLC6A11P48066 632 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 SLC16A1P53985 500 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 AK2P54819 239 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 RTP1P59025 263 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 HERVK_113P62684 666 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 KIF23Q02241 960 aaPredicted RBP3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 PRKCQQ04759 706 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 INO80DQ53TQ3 878 aaPredicted RBP3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 FAM83BQ5T0W9 1011 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 TIGD7Q6NT04 549 aaPredicted RBP3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 USP45Q70EL2 814 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 TRIM48Q8IWZ4 208 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 SIRT2Q8IXJ6 389 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 FAM186BQ8IYM0 893 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 GRAMD1CQ8IYS0 662 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 THEMISQ8N1K5 641 aaPredicted RBP3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 PRR18Q8N4B5 295 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 C7orf31Q8N865 590 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 ZBTB34Q8NCN2 500 aa3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 PNISRQ8TF01 805 aaKnown RBP3.83□□□□□ -1.8
RNU6-140P-201ENST00000384566 AUTS2Q8WXX7 1259 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms