RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 CLIP3Q96DZ5 547 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 MAML3Q96JK9 1138 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 CCDC77Q9BR77 488 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 METTL22Q9BUU2 404 aaPredicted RBP6.17□□□□□ -1.42
RFC1-202ENST00000381897 APOL6Q9BWW8 343 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 IRX2Q9BZI1 471 aaPredicted RBP6.17□□□□□ -1.42
RFC1-202ENST00000381897 NHEJ1Q9H9Q4 299 aaPredicted RBP6.17□□□□□ -1.42
RFC1-202ENST00000381897 ADD3Q9UEY8 706 aaKnown RBP6.17□□□□□ -1.42
RFC1-202ENST00000381897 HPSEQ9Y251 543 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 NPHP4O75161 1426 aaPredicted RBP6.17□□□□□ -1.42
RFC1-202ENST00000381897 HMX3A6NHT5 357 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 VSTM5A8MXK1 200 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 FAM13AO94988 1023 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 AGBL2Q5U5Z8 902 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 DENND2CQ68D51 928 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 PLPP6Q8IY26 295 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 MB21D1Q8N884 522 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 APPL2Q8NEU8 664 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 CYFIP2Q96F07 1278 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 LSM14BQ9BX40 385 aaKnown RBP6.17□□□□□ -1.42
RFC1-202ENST00000381897 UBE2OQ9C0C9 1292 aaKnown RBP6.17□□□□□ -1.42
RFC1-202ENST00000381897 SYNDIG1Q9H7V2 258 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 SEPSECSQ9HD40 501 aaKnown RBP6.17□□□□□ -1.42
RFC1-202ENST00000381897 ITSN1Q15811 1721 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 NCAPD2Q15021 1401 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 KIDINS220Q9ULH0 1771 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 PALLDQ8WX93 1383 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 STXBP3O00186 592 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 CSPG5O95196 566 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 LMNAP02545 664 aaKnown RBP6.17□□□□□ -1.42
RFC1-202ENST00000381897 FGFR1P11362 822 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 P4HA1P13674 534 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 CHKAP35790 457 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 FXR2P51116 673 aaKnown RBP eCLIP6.17□□□□□ -1.422e-6■■■□□ 18.9
RFC1-202ENST00000381897 TDGQ13569 410 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 RCN1Q15293 331 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 NAIF1Q69YI7 327 aaPredicted RBP6.17□□□□□ -1.42
RFC1-202ENST00000381897 NUP93Q8N1F7 819 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 MCUQ8NE86 351 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 ZC4H2Q9NQZ6 224 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 SNX12Q9UMY4 172 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 PLAAQ9Y263 795 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 MROH1Q8NDA8 1641 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 LGALS16A8MUM7 142 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 RGS16O15492 202 aaPredicted RBP6.16□□□□□ -1.42
RFC1-202ENST00000381897 TSC22D2O75157 780 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 PARP1P09874 1014 aaKnown RBP6.16□□□□□ -1.42
RFC1-202ENST00000381897 PRLRP16471 622 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 LTKP29376 864 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 CABP4P57796 275 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 OLR1P78380 273 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 IL1RL1Q01638 556 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 POU5F1BQ06416 359 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 MYO1EQ12965 1108 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 TTC38Q5R3I4 469 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 CEP70Q8NHQ1 597 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.16□□□□□ -1.42
RFC1-202ENST00000381897 UNC45AQ9H3U1 944 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 SMARCAD1Q9H4L7 1026 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 VPS37BQ9H9H4 285 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 PAPOLBQ9NRJ5 636 aaKnown RBP6.16□□□□□ -1.42
RFC1-202ENST00000381897 TXLNGQ9NUQ3 528 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 NKIRAS1Q9NYS0 192 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 NRKQ7Z2Y5 1582 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 RBM47A0AV96 593 aaKnown RBP6.16□□□□□ -1.42
RFC1-202ENST00000381897 TIMM44O43615 452 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 EVI5O60447 810 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 MMP1P03956 469 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 ZNF18P17022 549 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 SAT1P21673 171 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 TNFRSF8P28908 595 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 ARL3P36405 182 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 GCKRQ14397 625 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 MUM1Q2TAK8 710 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 GSPT2Q8IYD1 628 aaKnown RBP6.16□□□□□ -1.42
RFC1-202ENST00000381897 MIER2Q8N344 545 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 MYCBPAPQ8TBZ2 947 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 AENQ8WTP8 325 aaKnown RBP6.16□□□□□ -1.42
RFC1-202ENST00000381897 E2F7Q96AV8 911 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 DHTKD1Q96HY7 919 aaPredicted RBP6.16□□□□□ -1.42
RFC1-202ENST00000381897 PBKQ96KB5 322 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 ZSCAN32Q9NX65 697 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 TLR7Q9NYK1 1049 aaKnown RBP6.16□□□□□ -1.42
RFC1-202ENST00000381897 DBNLQ9UJU6 430 aaKnown RBP6.16□□□□□ -1.42
RFC1-202ENST00000381897 INVSQ9Y283 1065 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 SIK3Q9Y2K2 1263 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 TCHHQ07283 1943 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 MROH7-TTC4A0A0A0MT08 1334 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 IQANK1A0A1B0GTG1 560 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 TEX33O43247 280 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 ATP5HO75947 161 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 RPN1P04843 607 aaKnown RBP6.16□□□□□ -1.42
RFC1-202ENST00000381897 HOXC9P31274 260 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 KCNJ5P48544 419 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 GMFBP60983 142 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 RBM20Q5T481 1227 aaKnown RBP6.16□□□□□ -1.42
RFC1-202ENST00000381897 AGAP9Q5VTM2 703 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 TYW1BQ6NUM6 668 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 NKX2-3Q8TAU0 364 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 ESR2Q92731 530 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms