RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 TUBE1Q9UJT0 475 aa21.8■■□□□ 1.08
GTF3A-201ENST00000381140 MYH15Q9Y2K3 1946 aa21.8■■□□□ 1.08
GTF3A-201ENST00000381140 RRN3P2A6NIE6 340 aa21.79■■□□□ 1.08
GTF3A-201ENST00000381140 HBP1O60381 514 aa21.79■■□□□ 1.08
GTF3A-201ENST00000381140 DDIT3P35638 169 aa21.79■■□□□ 1.08
GTF3A-201ENST00000381140 THPOP40225 353 aa21.79■■□□□ 1.08
GTF3A-201ENST00000381140 PRKCEQ02156 737 aa21.79■■□□□ 1.08
GTF3A-201ENST00000381140 ORC2Q13416 577 aaPredicted RBP21.79■■□□□ 1.08
GTF3A-201ENST00000381140 RILPL1Q5EBL4 403 aa21.79■■□□□ 1.08
GTF3A-201ENST00000381140 CAGE1Q8TC20 777 aa21.79■■□□□ 1.08
GTF3A-201ENST00000381140 ZNF862O60290 1169 aa21.78■■□□□ 1.08
GTF3A-201ENST00000381140 SPIRE1Q08AE8 756 aa21.78■■□□□ 1.08
GTF3A-201ENST00000381140 RUFY4Q6ZNE9 571 aa21.78■■□□□ 1.08
GTF3A-201ENST00000381140 BBXQ8WY36 941 aaPredicted RBP21.78■■□□□ 1.08
GTF3A-201ENST00000381140 FAM167AQ96KS9 214 aa21.78■■□□□ 1.08
GTF3A-201ENST00000381140 TET1Q8NFU7 2136 aa21.78■■□□□ 1.08
GTF3A-201ENST00000381140 TRIOBPQ9H2D6 2365 aa21.77■■□□□ 1.08
GTF3A-201ENST00000381140 POTEMA6NI47 508 aa21.77■■□□□ 1.08
GTF3A-201ENST00000381140 PITPNM1O00562 1244 aa21.77■■□□□ 1.08
GTF3A-201ENST00000381140 STX6O43752 255 aa21.77■■□□□ 1.08
GTF3A-201ENST00000381140 OATP04181 439 aa21.77■■□□□ 1.08
GTF3A-201ENST00000381140 ACRP10323 421 aa21.77■■□□□ 1.08
GTF3A-201ENST00000381140 CKBP12277 381 aa21.77■■□□□ 1.08
GTF3A-201ENST00000381140 TECP42680 631 aa21.77■■□□□ 1.08
GTF3A-201ENST00000381140 EPHB4P54760 987 aa21.77■■□□□ 1.08
GTF3A-201ENST00000381140 ADAM17P78536 824 aa21.77■■□□□ 1.08
GTF3A-201ENST00000381140 CYP4A11Q02928 519 aa21.77■■□□□ 1.08
GTF3A-201ENST00000381140 PTGDRQ13258 359 aa21.77■■□□□ 1.08
GTF3A-201ENST00000381140 PPIGQ13427 754 aaKnown RBP eCLIP21.77■■□□□ 1.08
GTF3A-201ENST00000381140 EPHA7Q15375 998 aa21.77■■□□□ 1.08
GTF3A-201ENST00000381140 TRIM71Q2Q1W2 868 aaKnown RBP21.77■■□□□ 1.08
GTF3A-201ENST00000381140 MARCH8Q5T0T0 291 aa21.77■■□□□ 1.08
GTF3A-201ENST00000381140 LRRC8DQ7L1W4 858 aa21.77■■□□□ 1.08
GTF3A-201ENST00000381140 BRAPQ7Z569 592 aa21.77■■□□□ 1.08
GTF3A-201ENST00000381140 DEFB128Q7Z7B8 93 aa21.77■■□□□ 1.08
GTF3A-201ENST00000381140 FAM49AQ9H0Q0 323 aaPredicted RBP21.77■■□□□ 1.08
GTF3A-201ENST00000381140 NRBP2Q9NSY0 501 aa21.77■■□□□ 1.08
GTF3A-201ENST00000381140 SEPT9Q9UHD8 586 aaPredicted RBP21.77■■□□□ 1.08
GTF3A-201ENST00000381140 ARID2Q68CP9 1835 aa21.77■■□□□ 1.08
GTF3A-201ENST00000381140 CTSHP09668 335 aa21.76■■□□□ 1.07
GTF3A-201ENST00000381140 SELPP16109 830 aa21.76■■□□□ 1.07
GTF3A-201ENST00000381140 PSMC5P62195 406 aa21.76■■□□□ 1.07
GTF3A-201ENST00000381140 CTTNQ14247 550 aaKnown RBP21.76■■□□□ 1.07
GTF3A-201ENST00000381140 ZNF484Q5JVG2 852 aa21.76■■□□□ 1.07
GTF3A-201ENST00000381140 ZNF618Q5T7W0 954 aa21.76■■□□□ 1.07
GTF3A-201ENST00000381140 FOXD4L5Q5VV16 416 aaPredicted RBP21.76■■□□□ 1.07
GTF3A-201ENST00000381140 FOXD4L4Q8WXT5 416 aaPredicted RBP21.76■■□□□ 1.07
GTF3A-201ENST00000381140 DYDC2Q96IM9 177 aa21.76■■□□□ 1.07
GTF3A-201ENST00000381140 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.76■■□□□ 1.07
GTF3A-201ENST00000381140 RGL1Q9NZL6 768 aa21.76■■□□□ 1.07
GTF3A-201ENST00000381140 CIZ1Q9ULV3 898 aaPredicted RBP21.76■■□□□ 1.07
GTF3A-201ENST00000381140 MTMR6Q9Y217 621 aa21.76■■□□□ 1.07
GTF3A-201ENST00000381140 TMEM150BA6NC51 233 aa21.75■■□□□ 1.07
GTF3A-201ENST00000381140 DDX11L8A8MPP1 907 aa21.75■■□□□ 1.07
GTF3A-201ENST00000381140 RBAK-RBAKDNI3L0D1 243 aa21.75■■□□□ 1.07
GTF3A-201ENST00000381140 COL1A2P08123 1366 aa21.75■■□□□ 1.07
GTF3A-201ENST00000381140 IQCF3P0C7M6 154 aa21.75■■□□□ 1.07
GTF3A-201ENST00000381140 KLRC1P26715 233 aa21.75■■□□□ 1.07
GTF3A-201ENST00000381140 BMP8BP34820 402 aa21.75■■□□□ 1.07
GTF3A-201ENST00000381140 QARSP47897 775 aaKnown RBP21.75■■□□□ 1.07
GTF3A-201ENST00000381140 TMEM266Q2M3C6 531 aa21.75■■□□□ 1.07
GTF3A-201ENST00000381140 C4orf32Q8N8J7 132 aa21.75■■□□□ 1.07
GTF3A-201ENST00000381140 DNAJB3Q8WWF6 145 aa21.75■■□□□ 1.07
GTF3A-201ENST00000381140 EIF2AK1Q9BQI3 630 aaKnown RBP21.75■■□□□ 1.07
GTF3A-201ENST00000381140 SIP14410 1827 aa21.75■■□□□ 1.07
GTF3A-201ENST00000381140 MBLAC1A4D2B0 266 aaPredicted RBP21.74■■□□□ 1.07
GTF3A-201ENST00000381140 P4HBP07237 508 aaKnown RBP21.74■■□□□ 1.07
GTF3A-201ENST00000381140 RESTQ13127 1097 aa21.74■■□□□ 1.07
GTF3A-201ENST00000381140 MTERF2Q49AM1 385 aa21.74■■□□□ 1.07
GTF3A-201ENST00000381140 C9orf50Q5SZB4 431 aa21.74■■□□□ 1.07
GTF3A-201ENST00000381140 MTHFD1LQ6UB35 978 aa21.74■■□□□ 1.07
GTF3A-201ENST00000381140 TPH2Q8IWU9 490 aa21.74■■□□□ 1.07
GTF3A-201ENST00000381140 SH2D3AQ9BRG2 576 aa21.74■■□□□ 1.07
GTF3A-201ENST00000381140 LXNQ9BS40 222 aa21.74■■□□□ 1.07
GTF3A-201ENST00000381140 PRO3102Q9H379 93 aa21.74■■□□□ 1.07
GTF3A-201ENST00000381140 IL23AQ9NPF7 189 aa21.74■■□□□ 1.07
GTF3A-201ENST00000381140 ZBTB42B2RXF5 422 aa21.74■■□□□ 1.07
GTF3A-201ENST00000381140 RBL2Q08999 1139 aa21.74■■□□□ 1.07
GTF3A-201ENST00000381140 SHHQ15465 462 aa21.74■■□□□ 1.07
GTF3A-201ENST00000381140 XKR3Q5GH77 459 aa21.74■■□□□ 1.07
GTF3A-201ENST00000381140 TAF2Q6P1X5 1199 aa21.74■■□□□ 1.07
GTF3A-201ENST00000381140 FAM173BQ6P4H8 233 aa21.74■■□□□ 1.07
GTF3A-201ENST00000381140 FTOQ9C0B1 505 aaKnown RBP eCLIP21.74■■□□□ 1.07
GTF3A-201ENST00000381140 WRAP73Q9P2S5 460 aaPredicted RBP21.74■■□□□ 1.07
GTF3A-201ENST00000381140 CEP131Q9UPN4 1083 aa21.74■■□□□ 1.07
GTF3A-201ENST00000381140 RSPH10B2B2RC85 870 aa21.73■■□□□ 1.07
GTF3A-201ENST00000381140 DKC1O60832 514 aaKnown RBP eCLIP21.73■■□□□ 1.07
GTF3A-201ENST00000381140 RSPH10BP0C881 870 aa21.73■■□□□ 1.07
GTF3A-201ENST00000381140 PLA2G4FQ68DD2 849 aa21.73■■□□□ 1.07
GTF3A-201ENST00000381140 RSPH3Q86UC2 560 aa21.73■■□□□ 1.07
GTF3A-201ENST00000381140 RPUSD2Q8IZ73 545 aaKnown RBP21.73■■□□□ 1.07
GTF3A-201ENST00000381140 TDHQ8IZJ6 230 aa21.73■■□□□ 1.07
GTF3A-201ENST00000381140 METTL13Q8N6R0 699 aa21.73■■□□□ 1.07
GTF3A-201ENST00000381140 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.73■■□□□ 1.07
GTF3A-201ENST00000381140 CHMP5Q9NZZ3 219 aa21.73■■□□□ 1.07
GTF3A-201ENST00000381140 PCDHA2Q9Y5H9 948 aa21.73■■□□□ 1.07
GTF3A-201ENST00000381140 TMEM62Q0P6H9 643 aa21.72■■□□□ 1.07
GTF3A-201ENST00000381140 ZNF365Q70YC5 407 aa21.72■■□□□ 1.07
GTF3A-201ENST00000381140 C16orf59Q7L2K0 433 aa21.72■■□□□ 1.07
GTF3A-201ENST00000381140 ZSWIM4Q9H7M6 989 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms