RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 UBE2TQ9NPD8 197 aaPredicted RBP13.66□□□□□ -0.22
CDX2-201ENST00000381020 DDX41Q9UJV9 622 aaKnown RBP13.66□□□□□ -0.22
CDX2-201ENST00000381020 DUSP10Q9Y6W6 482 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 TFRCP02786 760 aaKnown RBP13.66□□□□□ -0.22
CDX2-201ENST00000381020 CFAP58Q5T655 872 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 CEP63Q96MT8 703 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 GLIS2Q9BZE0 524 aaPredicted RBP13.66□□□□□ -0.22
CDX2-201ENST00000381020 PACSIN2Q9UNF0 486 aaPredicted RBP13.66□□□□□ -0.22
CDX2-201ENST00000381020 MRFAP1Q9Y605 127 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 NUP98P52948 1817 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 A0A1W2PRG0 241 aa13.65□□□□□ -0.22
CDX2-201ENST00000381020 ARP10275 920 aa13.65□□□□□ -0.22
CDX2-201ENST00000381020 SLC9A1P19634 815 aa13.65□□□□□ -0.22
CDX2-201ENST00000381020 CTNNA2P26232 953 aa13.65□□□□□ -0.22
CDX2-201ENST00000381020 IWS1Q96ST2 819 aa13.65□□□□□ -0.22
CDX2-201ENST00000381020 BAZ2AQ9UIF9 1905 aaKnown RBP13.65□□□□□ -0.22
CDX2-201ENST00000381020 H0YHG0 523 aa13.65□□□□□ -0.22
CDX2-201ENST00000381020 ZBTB39O15060 712 aa13.65□□□□□ -0.22
CDX2-201ENST00000381020 PPP1R11O60927 126 aaPredicted RBP13.65□□□□□ -0.22
CDX2-201ENST00000381020 TADA3O75528 432 aa13.65□□□□□ -0.22
CDX2-201ENST00000381020 PPP4R3CPQ6ZMV5 832 aa13.65□□□□□ -0.22
CDX2-201ENST00000381020 ATP6V0A1Q93050 837 aa13.65□□□□□ -0.22
CDX2-201ENST00000381020 DUSP9Q99956 384 aaKnown RBP13.65□□□□□ -0.22
CDX2-201ENST00000381020 TYW1Q9NV66 732 aaKnown RBP13.65□□□□□ -0.22
CDX2-201ENST00000381020 JRKLQ9Y4A0 524 aa13.65□□□□□ -0.22
CDX2-201ENST00000381020 ITIH6Q6UXX5 1313 aa13.65□□□□□ -0.22
CDX2-201ENST00000381020 USP54Q70EL1 1684 aa13.65□□□□□ -0.22
CDX2-201ENST00000381020 DOT1LQ8TEK3 1739 aa13.65□□□□□ -0.22
CDX2-201ENST00000381020 ZNF185O15231 689 aa13.65□□□□□ -0.22
CDX2-201ENST00000381020 HIP1RO75146 1068 aa13.65□□□□□ -0.22
CDX2-201ENST00000381020 QARSP47897 775 aaKnown RBP13.65□□□□□ -0.22
CDX2-201ENST00000381020 SETQ01105 290 aaPredicted RBP13.65□□□□□ -0.22
CDX2-201ENST00000381020 PHLDB2Q86SQ0 1253 aa13.65□□□□□ -0.22
CDX2-201ENST00000381020 ACCSQ96QU6 501 aa13.65□□□□□ -0.22
CDX2-201ENST00000381020 RUSC1Q9BVN2 902 aa13.65□□□□□ -0.22
CDX2-201ENST00000381020 WNT10BO00744 389 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 PNMA6AP0CW24 399 aaPredicted RBP13.64□□□□□ -0.23
CDX2-201ENST00000381020 IGBP1P78318 339 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 HAS1Q92839 578 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 ZNF668Q96K58 619 aaPredicted RBP13.64□□□□□ -0.23
CDX2-201ENST00000381020 ABCB6Q9NP58 842 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 CEP72Q9P209 647 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 TMX2Q9Y320 296 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 NFIBO00712 420 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 ZEB2O60315 1214 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 P4HBP07237 508 aaKnown RBP13.64□□□□□ -0.23
CDX2-201ENST00000381020 MARK3P27448 753 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 NFRKBQ6P4R8 1299 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 ATG4CQ96DT6 458 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 GMCL1Q96IK5 515 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 MTMR9Q96QG7 549 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 KRT12Q99456 494 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 HSD3B7Q9H2F3 369 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 AMFRQ9UKV5 643 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 USTQ9Y2C2 406 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 RPS6P62753 249 aaKnown RBP13.64□□□□□ -0.23
CDX2-201ENST00000381020 APBA1Q02410 837 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 CENPPQ6IPU0 288 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 SWSAP1Q6NVH7 229 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 MMTAG2Q9BU76 263 aaKnown RBP13.64□□□□□ -0.23
CDX2-201ENST00000381020 ZCCHC17Q9NP64 241 aaKnown RBP13.64□□□□□ -0.23
CDX2-201ENST00000381020 GABBR1Q9UBS5 961 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 DNAJC12Q9UKB3 198 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 CTIFO43310 598 aaKnown RBP13.64□□□□□ -0.23
CDX2-201ENST00000381020 KLRC4O43908 158 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 KRT19P08727 400 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 MXI1P50539 228 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 GYS2P54840 703 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 NPEPPSP55786 919 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 PLCB3Q01970 1234 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 GUCY2DQ02846 1103 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 CDAN1Q8IWY9 1227 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 KIFAP3Q92845 792 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 KCNH7Q9NS40 1196 aa13.64□□□□□ -0.23
CDX2-201ENST00000381020 EIF3CLB5ME19 914 aaKnown RBP13.63□□□□□ -0.23
CDX2-201ENST00000381020 CCND2P30279 289 aa13.63□□□□□ -0.23
CDX2-201ENST00000381020 MAP3K9P80192 1104 aa13.63□□□□□ -0.23
CDX2-201ENST00000381020 EPHA7Q15375 998 aa13.63□□□□□ -0.23
CDX2-201ENST00000381020 GRIPAP1Q4V328 841 aa13.63□□□□□ -0.23
CDX2-201ENST00000381020 NBPF12Q5TAG4 269 aaPredicted RBP13.63□□□□□ -0.23
CDX2-201ENST00000381020 SPATA20Q8TB22 786 aa13.63□□□□□ -0.23
CDX2-201ENST00000381020 UBLCP1Q8WVY7 318 aaPredicted RBP13.63□□□□□ -0.23
CDX2-201ENST00000381020 SAAL1Q96ER3 474 aa13.63□□□□□ -0.23
CDX2-201ENST00000381020 MED15Q96RN5 788 aa13.63□□□□□ -0.23
CDX2-201ENST00000381020 EIF3CQ99613 913 aaKnown RBP13.63□□□□□ -0.23
CDX2-201ENST00000381020 LACRTQ9GZZ8 138 aa13.63□□□□□ -0.23
CDX2-201ENST00000381020 HACL1Q9UJ83 578 aa13.63□□□□□ -0.23
CDX2-201ENST00000381020 TRPC6Q9Y210 931 aa13.63□□□□□ -0.23
CDX2-201ENST00000381020 IVNS1ABPQ9Y6Y0 642 aa13.63□□□□□ -0.23
CDX2-201ENST00000381020 LAMB4A4D0S4 1761 aa13.63□□□□□ -0.23
CDX2-201ENST00000381020 PALMO75781 387 aa13.63□□□□□ -0.23
CDX2-201ENST00000381020 SREBF1P36956 1147 aa13.63□□□□□ -0.23
CDX2-201ENST00000381020 TBX2Q13207 712 aaPredicted RBP13.63□□□□□ -0.23
CDX2-201ENST00000381020 PLA2G4FQ68DD2 849 aa13.63□□□□□ -0.23
CDX2-201ENST00000381020 GSPT2Q8IYD1 628 aaKnown RBP13.63□□□□□ -0.23
CDX2-201ENST00000381020 SLC7A3Q8WY07 619 aa13.63□□□□□ -0.23
CDX2-201ENST00000381020 RPGRIP1Q96KN7 1286 aa13.63□□□□□ -0.23
CDX2-201ENST00000381020 TAAR1Q96RJ0 339 aa13.63□□□□□ -0.23
CDX2-201ENST00000381020 SPEF2Q9C093 1822 aa13.63□□□□□ -0.23
CDX2-201ENST00000381020 CCDC151A5D8V7 595 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms