RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 FIZ1Q96SL8 496 aa21.24■□□□□ 0.99
GMDS-201ENST00000380805 ZHX3Q9H4I2 956 aa21.24■□□□□ 0.99
GMDS-201ENST00000380805 ZNF214Q9UL59 606 aaPredicted RBP21.24■□□□□ 0.99
GMDS-201ENST00000380805 REXO2Q9Y3B8 237 aaKnown RBP21.24■□□□□ 0.99
GMDS-201ENST00000380805 WDR81Q562E7 1941 aa21.23■□□□□ 0.99
GMDS-201ENST00000380805 P4HBP07237 508 aaKnown RBP21.23■□□□□ 0.99
GMDS-201ENST00000380805 MYBP10242 640 aa21.23■□□□□ 0.99
GMDS-201ENST00000380805 ADAM9Q13443 819 aa21.23■□□□□ 0.99
GMDS-201ENST00000380805 MTMR1Q13613 665 aa21.23■□□□□ 0.99
GMDS-201ENST00000380805 CATSPERGQ6ZRH7 1159 aa21.23■□□□□ 0.99
GMDS-201ENST00000380805 USP50Q70EL3 339 aaPredicted RBP21.23■□□□□ 0.99
GMDS-201ENST00000380805 FRMD5Q7Z6J6 570 aa21.23■□□□□ 0.99
GMDS-201ENST00000380805 ZFP91Q96JP5 570 aaPredicted RBP21.23■□□□□ 0.99
GMDS-201ENST00000380805 PARVGQ9HBI0 331 aa21.23■□□□□ 0.99
GMDS-201ENST00000380805 RNF146Q9NTX7 359 aa21.23■□□□□ 0.99
GMDS-201ENST00000380805 ZNHIT6Q9NWK9 470 aaKnown RBP21.23■□□□□ 0.99
GMDS-201ENST00000380805 AFG3L2Q9Y4W6 797 aa21.23■□□□□ 0.99
GMDS-201ENST00000380805 ASTN1O14525 1302 aa21.22■□□□□ 0.99
GMDS-201ENST00000380805 LCTP09848 1927 aa21.22■□□□□ 0.99
GMDS-201ENST00000380805 CALUO43852 315 aaPredicted RBP21.22■□□□□ 0.99
GMDS-201ENST00000380805 NR2F2P24468 414 aa21.22■□□□□ 0.99
GMDS-201ENST00000380805 CASQ1P31415 396 aa21.22■□□□□ 0.99
GMDS-201ENST00000380805 HMGCS2P54868 508 aa21.22■□□□□ 0.99
GMDS-201ENST00000380805 PPP2R3AQ06190 1150 aa21.22■□□□□ 0.99
GMDS-201ENST00000380805 KCNMA1Q12791 1236 aa21.22■□□□□ 0.99
GMDS-201ENST00000380805 COG2Q14746 738 aa21.22■□□□□ 0.99
GMDS-201ENST00000380805 PRAMEF18Q5VWM3 479 aa21.22■□□□□ 0.99
GMDS-201ENST00000380805 MIER3Q7Z3K6 550 aa21.22■□□□□ 0.99
GMDS-201ENST00000380805 GPBP1L1Q9HC44 474 aaPredicted RBP21.22■□□□□ 0.99
GMDS-201ENST00000380805 HOMER2Q9NSB8 354 aa21.22■□□□□ 0.99
GMDS-201ENST00000380805 DBR1Q9UK59 544 aaKnown RBP21.22■□□□□ 0.99
GMDS-201ENST00000380805 EPHB6O15197 1021 aa21.21■□□□□ 0.99
GMDS-201ENST00000380805 SLC16A3O15427 465 aaKnown RBP21.21■□□□□ 0.99
GMDS-201ENST00000380805 KIF5CO60282 957 aa21.21■□□□□ 0.99
GMDS-201ENST00000380805 FAM13AO94988 1023 aa21.21■□□□□ 0.99
GMDS-201ENST00000380805 MAP3K9P80192 1104 aa21.21■□□□□ 0.99
GMDS-201ENST00000380805 BAP1Q92560 729 aa21.21■□□□□ 0.99
GMDS-201ENST00000380805 PCMTD1Q96MG8 357 aaPredicted RBP21.21■□□□□ 0.99
GMDS-201ENST00000380805 RMDN3Q96TC7 470 aa21.21■□□□□ 0.99
GMDS-201ENST00000380805 ZSWIM4Q9H7M6 989 aa21.21■□□□□ 0.99
GMDS-201ENST00000380805 LZTFL1Q9NQ48 299 aa21.21■□□□□ 0.99
GMDS-201ENST00000380805 RIPK3Q9Y572 518 aa21.21■□□□□ 0.99
GMDS-201ENST00000380805 ZMYM2Q9UBW7 1377 aa21.21■□□□□ 0.99
GMDS-201ENST00000380805 A0A0U1RQJ8 604 aa21.21■□□□□ 0.99
GMDS-201ENST00000380805 EIF3CLB5ME19 914 aaKnown RBP21.21■□□□□ 0.99
GMDS-201ENST00000380805 EIF2AK2P19525 551 aaKnown RBP21.21■□□□□ 0.99
GMDS-201ENST00000380805 CYLC1P35663 651 aaPredicted RBP21.21■□□□□ 0.99
GMDS-201ENST00000380805 ARHGAP29Q52LW3 1261 aa21.21■□□□□ 0.99
GMDS-201ENST00000380805 ATRIPQ8WXE1 791 aa21.21■□□□□ 0.99
GMDS-201ENST00000380805 EIF3CQ99613 913 aaKnown RBP21.21■□□□□ 0.99
GMDS-201ENST00000380805 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.21■□□□□ 0.99
GMDS-201ENST00000380805 KIAA1217Q5T5P2 1943 aa21.2■□□□□ 0.98
GMDS-201ENST00000380805 ZBTB39O15060 712 aa21.2■□□□□ 0.98
GMDS-201ENST00000380805 PRPF6O94906 941 aaKnown RBP21.2■□□□□ 0.98
GMDS-201ENST00000380805 KRT83P78385 493 aa21.2■□□□□ 0.98
GMDS-201ENST00000380805 RBM10P98175 930 aaKnown RBP21.2■□□□□ 0.98
GMDS-201ENST00000380805 PNMA8AQ86V59 439 aaPredicted RBP21.2■□□□□ 0.98
GMDS-201ENST00000380805 RBM46Q8TBY0 533 aaKnown RBP21.2■□□□□ 0.98
GMDS-201ENST00000380805 STRA6Q9BX79 667 aa21.2■□□□□ 0.98
GMDS-201ENST00000380805 HAUS4Q9H6D7 363 aa21.2■□□□□ 0.98
GMDS-201ENST00000380805 MRFAP1Q9Y605 127 aa21.2■□□□□ 0.98
GMDS-201ENST00000380805 RRP9O43818 475 aaKnown RBP21.19■□□□□ 0.98
GMDS-201ENST00000380805 USP2O75604 605 aaPredicted RBP21.19■□□□□ 0.98
GMDS-201ENST00000380805 GCNT3O95395 438 aa21.19■□□□□ 0.98
GMDS-201ENST00000380805 RPL13P26373 211 aaKnown RBP21.19■□□□□ 0.98
GMDS-201ENST00000380805 MAPK7Q13164 816 aa21.19■□□□□ 0.98
GMDS-201ENST00000380805 VSIG10LQ86VR7 867 aa21.19■□□□□ 0.98
GMDS-201ENST00000380805 ZNF784Q8NCA9 323 aaPredicted RBP21.19■□□□□ 0.98
GMDS-201ENST00000380805 BANK1Q8NDB2 785 aa21.19■□□□□ 0.98
GMDS-201ENST00000380805 RDM1Q8NG50 284 aa21.19■□□□□ 0.98
GMDS-201ENST00000380805 GPRASP2Q96D09 838 aa21.19■□□□□ 0.98
GMDS-201ENST00000380805 TEX13BQ9BXU2 312 aa21.19■□□□□ 0.98
GMDS-201ENST00000380805 NHEJ1Q9H9Q4 299 aaPredicted RBP21.19■□□□□ 0.98
GMDS-201ENST00000380805 FAM207AQ9NSI2 230 aaPredicted RBP21.19■□□□□ 0.98
GMDS-201ENST00000380805 TMOD4Q9NZQ9 345 aa21.19■□□□□ 0.98
GMDS-201ENST00000380805 CEP72Q9P209 647 aa21.19■□□□□ 0.98
GMDS-201ENST00000380805 FZD1Q9UP38 647 aa21.19■□□□□ 0.98
GMDS-201ENST00000380805 ARHGEF35A5YM69 484 aa21.18■□□□□ 0.98
GMDS-201ENST00000380805 MAFGO15525 162 aa21.18■□□□□ 0.98
GMDS-201ENST00000380805 TGFB1I1O43294 461 aa21.18■□□□□ 0.98
GMDS-201ENST00000380805 URI1O94763 535 aaPredicted RBP21.18■□□□□ 0.98
GMDS-201ENST00000380805 LCA5LO95447 670 aa21.18■□□□□ 0.98
GMDS-201ENST00000380805 SFNP31947 248 aa21.18■□□□□ 0.98
GMDS-201ENST00000380805 JAK3P52333 1124 aa21.18■□□□□ 0.98
GMDS-201ENST00000380805 HERVK_113P62684 666 aa21.18■□□□□ 0.98
GMDS-201ENST00000380805 BAATQ14032 418 aaPredicted RBP21.18■□□□□ 0.98
GMDS-201ENST00000380805 TMEM132BQ14DG7 1078 aa21.18■□□□□ 0.98
GMDS-201ENST00000380805 SNRNP48Q6IEG0 339 aaKnown RBP21.18■□□□□ 0.98
GMDS-201ENST00000380805 ZNF720Q7Z2F6 126 aa21.18■□□□□ 0.98
GMDS-201ENST00000380805 NEK11Q8NG66 645 aa21.18■□□□□ 0.98
GMDS-201ENST00000380805 SYN2Q92777 582 aaPredicted RBP21.18■□□□□ 0.98
GMDS-201ENST00000380805 IRX2Q9BZI1 471 aaPredicted RBP21.18■□□□□ 0.98
GMDS-201ENST00000380805 NUCKS1Q9H1E3 243 aaKnown RBP21.18■□□□□ 0.98
GMDS-201ENST00000380805 MMRN2Q9H8L6 949 aa21.18■□□□□ 0.98
GMDS-201ENST00000380805 METTL14Q9HCE5 456 aaKnown RBP21.18■□□□□ 0.98
GMDS-201ENST00000380805 CLEC11AQ9Y240 323 aa21.18■□□□□ 0.98
GMDS-201ENST00000380805 SNCAIPQ9Y6H5 919 aa21.18■□□□□ 0.98
GMDS-201ENST00000380805 KIF3CO14782 793 aa21.18■□□□□ 0.98
GMDS-201ENST00000380805 PPP1R37O75864 691 aa21.18■□□□□ 0.98
GMDS-201ENST00000380805 NR3C1P04150 777 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms