RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 IPO7O95373 1038 aaKnown RBP8.78□□□□□ -1
PDLIM5-204ENST00000380176 POLR2FP61218 127 aaKnown RBP8.78□□□□□ -1
PDLIM5-204ENST00000380176 TUBB2AQ13885 445 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 KNOP1Q1ED39 458 aaKnown RBP8.78□□□□□ -1
PDLIM5-204ENST00000380176 LRCH2Q5VUJ6 765 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 RINT1Q6NUQ1 792 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 LDHDQ86WU2 507 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 CHURC1Q8WUH1 139 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 IQCDQ96DY2 449 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 ZBED3Q96IU2 234 aaPredicted RBP8.78□□□□□ -1
PDLIM5-204ENST00000380176 MMS19Q96T76 1030 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 POLR3CQ9BUI4 534 aaPredicted RBP8.78□□□□□ -1
PDLIM5-204ENST00000380176 TUBB2BQ9BVA1 445 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 LSM14BQ9BX40 385 aaKnown RBP8.78□□□□□ -1
PDLIM5-204ENST00000380176 IFIH1Q9BYX4 1025 aaKnown RBP8.78□□□□□ -1
PDLIM5-204ENST00000380176 KIAA1522Q9P206 1035 aaPredicted RBP8.78□□□□□ -1
PDLIM5-204ENST00000380176 SALL4Q9UJQ4 1053 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 CAPN6Q9Y6Q1 641 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 CTAGE15A4D2H0 777 aa8.77□□□□□ -1
PDLIM5-204ENST00000380176 LCA5LO95447 670 aa8.77□□□□□ -1
PDLIM5-204ENST00000380176 EYA4O95677 639 aa8.77□□□□□ -1
PDLIM5-204ENST00000380176 CTAGE8P0CG41 777 aa8.77□□□□□ -1
PDLIM5-204ENST00000380176 KCNH2Q12809 1159 aa8.77□□□□□ -1
PDLIM5-204ENST00000380176 KIF5AQ12840 1032 aa8.77□□□□□ -1
PDLIM5-204ENST00000380176 SPA17Q15506 151 aa8.77□□□□□ -1
PDLIM5-204ENST00000380176 ASTE1Q2TB18 679 aaPredicted RBP8.77□□□□□ -1
PDLIM5-204ENST00000380176 PAPD7Q5XG87 772 aaKnown RBP8.77□□□□□ -1
PDLIM5-204ENST00000380176 CTAGE6Q86UF2 777 aa8.77□□□□□ -1
PDLIM5-204ENST00000380176 CTAGE4Q8IX94 777 aa8.77□□□□□ -1
PDLIM5-204ENST00000380176 NIM1KQ8IY84 436 aa8.77□□□□□ -1
PDLIM5-204ENST00000380176 SLC5A5Q92911 643 aa8.77□□□□□ -1
PDLIM5-204ENST00000380176 ZBTB9Q96C00 473 aa8.77□□□□□ -1
PDLIM5-204ENST00000380176 CAPZA3Q96KX2 299 aa8.77□□□□□ -1
PDLIM5-204ENST00000380176 IGSF5Q9NSI5 407 aa8.77□□□□□ -1
PDLIM5-204ENST00000380176 TRAF3IP3Q9Y228 551 aa8.77□□□□□ -1
PDLIM5-204ENST00000380176 ASTN1O14525 1302 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 ZNF536O15090 1300 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 RFX1P22670 979 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 CASP4P49662 377 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 FAM193AP78312 1265 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 EDRF1Q3B7T1 1238 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 FKBP1CQ5VVH2 108 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 FAM83AQ86UY5 434 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 KSR1Q8IVT5 923 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 ANKRD13CQ8N6S4 541 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 MTMR14Q8NCE2 650 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 MSANTD4Q8NCY6 345 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 AGBL3Q8NEM8 1001 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 ZNF341Q9BYN7 854 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 DEF6Q9H4E7 631 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 CEP72Q9P209 647 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 COL20A1Q9P218 1284 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 SAR1BQ9Y6B6 198 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 POM121CA8CG34 1229 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 PHF20L1A8MW92 1017 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 CETN3O15182 167 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 CLIC2O15247 247 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 AKR1B10O60218 316 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 AKAP3O75969 853 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 GCNT3O95395 438 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 MOCS3O95396 460 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 GNA14O95837 355 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 ACTN1P12814 892 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 NMT1P30419 496 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 PPP2R5CQ13362 524 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 CEP55Q53EZ4 464 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 ZC2HC1CQ53FD0 456 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 PROCA1Q8NCQ7 364 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 FUT8Q9BYC5 575 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 UNC45AQ9H3U1 944 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 SH2D4AQ9H788 454 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 SUGCTQ9HAC7 445 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 ARFGAP3Q9NP61 516 aa8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 MRPL11Q9Y3B7 192 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-204ENST00000380176 ASTN2O75129 1339 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 PDE2AO00408 941 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 NFIBO00712 420 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 GAS7O60861 476 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 KIF20AO95235 890 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 SLC9A1P19634 815 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 PTGER2P43116 358 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 MAP3K10Q02779 954 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 ARID5AQ03989 594 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 RASA3Q14644 834 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 LONRF2Q1L5Z9 754 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 TDRD12Q587J7 1177 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 DPY19L2P1Q6NXN4 242 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 C1orf186Q6ZWK4 172 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 DRC1Q96MC2 740 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 MYOZ2Q9NPC6 264 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 PKD2L1Q9P0L9 805 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 FEM1BQ9UK73 627 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 CCDC151A5D8V7 595 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 DDX39AO00148 427 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 PLA2G6O60733 806 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 ASNSP08243 561 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 MAGEA1P43355 309 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 PRELPP51888 382 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 VSNL1P62760 191 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 ENOX2Q16206 610 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms