RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 CCDC60Q8IWA6 550 aaPredicted RBP19.26■□□□□ 0.67
RER1-202ENST00000378512 SMAP1Q8IYB5 467 aaPredicted RBP19.26■□□□□ 0.67
RER1-202ENST00000378512 OXER1Q8TDS5 423 aa19.26■□□□□ 0.67
RER1-202ENST00000378512 ZSCAN31Q96LW9 406 aaPredicted RBP19.26■□□□□ 0.67
RER1-202ENST00000378512 LLPHQ9BRT6 129 aaKnown RBP19.26■□□□□ 0.67
RER1-202ENST00000378512 AZI2Q9H6S1 392 aa19.26■□□□□ 0.67
RER1-202ENST00000378512 TLL1O43897 1013 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 PSMD10O75832 226 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 TDP2O95551 362 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 MARK3P27448 753 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 THPOP40225 353 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 PPFIA1Q13136 1202 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 PLCB4Q15147 1175 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 RABEP1Q15276 862 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 GRIK4Q16099 956 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 FAM26DQ5JW98 314 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 PPP4R3AQ6IN85 833 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 FAM117BQ6P1L5 589 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 ETNPPLQ8TBG4 499 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 SH2B1Q9NRF2 756 aaPredicted RBP19.25■□□□□ 0.67
RER1-202ENST00000378512 THEGQ9P2T0 379 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 MAFBQ9Y5Q3 323 aaPredicted RBP19.25■□□□□ 0.67
RER1-202ENST00000378512 MTCH2Q9Y6C9 303 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 COL4A4P53420 1690 aaPredicted RBP19.25■□□□□ 0.67
RER1-202ENST00000378512 LOXHD1Q8IVV2 1947 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 TTC28Q96AY4 2481 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 RRN3P2A6NIE6 340 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 DDX39AO00148 427 aaKnown RBP19.25■□□□□ 0.67
RER1-202ENST00000378512 INSRRP14616 1297 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 ATP4AP20648 1035 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 MKRN4PQ13434 485 aaPredicted RBP19.25■□□□□ 0.67
RER1-202ENST00000378512 INF2Q27J81 1249 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 TAF2Q6P1X5 1199 aa19.25■□□□□ 0.67
RER1-202ENST00000378512 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.25■□□□□ 0.67
RER1-202ENST00000378512 EVPLQ92817 2033 aa19.24■□□□□ 0.67
RER1-202ENST00000378512 CCDC194A0A1B0GVG4 234 aa19.24■□□□□ 0.67
RER1-202ENST00000378512 RSPH10B2B2RC85 870 aa19.24■□□□□ 0.67
RER1-202ENST00000378512 MMP1P03956 469 aa19.24■□□□□ 0.67
RER1-202ENST00000378512 CTSHP09668 335 aa19.24■□□□□ 0.67
RER1-202ENST00000378512 RSPH10BP0C881 870 aa19.24■□□□□ 0.67
RER1-202ENST00000378512 EARS2Q5JPH6 523 aaKnown RBP19.24■□□□□ 0.67
RER1-202ENST00000378512 MIS18BP1Q6P0N0 1132 aa19.24■□□□□ 0.67
RER1-202ENST00000378512 TNPO1Q92973 898 aaKnown RBP19.24■□□□□ 0.67
RER1-202ENST00000378512 TBC1D32Q96NH3 1257 aa19.24■□□□□ 0.67
RER1-202ENST00000378512 TUBE1Q9UJT0 475 aa19.24■□□□□ 0.67
RER1-202ENST00000378512 PCDHA10Q9Y5I2 948 aa19.24■□□□□ 0.67
RER1-202ENST00000378512 IGSF9BQ9UPX0 1349 aa19.23■□□□□ 0.67
RER1-202ENST00000378512 POTEB3A0JP26 581 aa19.23■□□□□ 0.67
RER1-202ENST00000378512 GCFC2P16383 781 aaKnown RBP19.23■□□□□ 0.67
RER1-202ENST00000378512 KRT2P35908 639 aa19.23■□□□□ 0.67
RER1-202ENST00000378512 TFF2Q03403 129 aa19.23■□□□□ 0.67
RER1-202ENST00000378512 NR5A1Q13285 461 aa19.23■□□□□ 0.67
RER1-202ENST00000378512 FAM160B1Q5W0V3 765 aa19.23■□□□□ 0.67
RER1-202ENST00000378512 POTEBQ6S5H4 581 aa19.23■□□□□ 0.67
RER1-202ENST00000378512 RUFY4Q6ZNE9 571 aa19.23■□□□□ 0.67
RER1-202ENST00000378512 NEK8Q86SG6 692 aa19.23■□□□□ 0.67
RER1-202ENST00000378512 CCDC83Q8IWF9 413 aa19.23■□□□□ 0.67
RER1-202ENST00000378512 DBF4BQ8NFT6 615 aa19.23■□□□□ 0.67
RER1-202ENST00000378512 ATP8B4Q8TF62 1192 aa19.23■□□□□ 0.67
RER1-202ENST00000378512 ASB2Q96Q27 587 aa19.23■□□□□ 0.67
RER1-202ENST00000378512 UIMC1Q96RL1 719 aa19.23■□□□□ 0.67
RER1-202ENST00000378512 KCNMB3Q9NPA1 279 aa19.23■□□□□ 0.67
RER1-202ENST00000378512 ZNF302Q9NR11 478 aa19.23■□□□□ 0.67
RER1-202ENST00000378512 PRRC2BQ5JSZ5 2229 aaKnown RBP19.23■□□□□ 0.67
RER1-202ENST00000378512 COL1A2P08123 1366 aa19.22■□□□□ 0.67
RER1-202ENST00000378512 WDR64B1ANS9 1081 aa19.22■□□□□ 0.67
RER1-202ENST00000378512 ZBTB42B2RXF5 422 aa19.22■□□□□ 0.67
RER1-202ENST00000378512 KIF28PB7ZC32 967 aa19.22■□□□□ 0.67
RER1-202ENST00000378512 SLC37A4O43826 429 aa19.22■□□□□ 0.67
RER1-202ENST00000378512 HBP1O60381 514 aa19.22■□□□□ 0.67
RER1-202ENST00000378512 LPXNO60711 386 aa19.22■□□□□ 0.67
RER1-202ENST00000378512 RPLP2P05387 115 aaKnown RBP19.22■□□□□ 0.67
RER1-202ENST00000378512 MGAT3Q09327 533 aa19.22■□□□□ 0.67
RER1-202ENST00000378512 GRB10Q13322 594 aa19.22■□□□□ 0.67
RER1-202ENST00000378512 PLEKHG4Q58EX7 1191 aa19.22■□□□□ 0.67
RER1-202ENST00000378512 LRCH2Q5VUJ6 765 aa19.22■□□□□ 0.67
RER1-202ENST00000378512 SWSAP1Q6NVH7 229 aa19.22■□□□□ 0.67
RER1-202ENST00000378512 PIK3AP1Q6ZUJ8 805 aa19.22■□□□□ 0.67
RER1-202ENST00000378512 ATXN2LQ8WWM7 1075 aaKnown RBP19.22■□□□□ 0.67
RER1-202ENST00000378512 ZBED2Q9BTP6 218 aa19.22■□□□□ 0.67
RER1-202ENST00000378512 UPF2Q9HAU5 1272 aaKnown RBP19.22■□□□□ 0.67
RER1-202ENST00000378512 MTUS1Q9ULD2 1270 aa19.22■□□□□ 0.67
RER1-202ENST00000378512 ABHD14A-ACY1A0A1B0GW23 586 aa19.21■□□□□ 0.67
RER1-202ENST00000378512 GAS7O60861 476 aa19.21■□□□□ 0.67
RER1-202ENST00000378512 GJB5O95377 273 aa19.21■□□□□ 0.67
RER1-202ENST00000378512 PSAPP07602 524 aa19.21■□□□□ 0.67
RER1-202ENST00000378512 SFNP31947 248 aa19.21■□□□□ 0.67
RER1-202ENST00000378512 IKBKEQ14164 716 aa19.21■□□□□ 0.67
RER1-202ENST00000378512 PDXDC2PQ6P474 469 aa19.21■□□□□ 0.67
RER1-202ENST00000378512 RDM1Q8NG50 284 aa19.21■□□□□ 0.67
RER1-202ENST00000378512 GDPD5Q8WTR4 605 aa19.21■□□□□ 0.67
RER1-202ENST00000378512 SYMPKQ92797 1274 aaKnown RBP19.21■□□□□ 0.67
RER1-202ENST00000378512 UNC45AQ9H3U1 944 aa19.21■□□□□ 0.67
RER1-202ENST00000378512 DISC1Q9NRI5 854 aa19.21■□□□□ 0.67
RER1-202ENST00000378512 DDX25Q9UHL0 483 aaKnown RBP19.21■□□□□ 0.67
RER1-202ENST00000378512 TRPC6Q9Y210 931 aa19.21■□□□□ 0.67
RER1-202ENST00000378512 PCDHA2Q9Y5H9 948 aa19.21■□□□□ 0.67
RER1-202ENST00000378512 FAM205CA6NFA0 338 aa19.2■□□□□ 0.66
RER1-202ENST00000378512 BTBD18B2RXH4 712 aa19.2■□□□□ 0.66
RER1-202ENST00000378512 BACH1O14867 736 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms