RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.27■□□□□ 0.2
NPHP4-201ENST00000378156 XPOTO43592 962 aaKnown RBP16.27■□□□□ 0.2
NPHP4-201ENST00000378156 TBC1D8O95759 1140 aa16.27■□□□□ 0.2
NPHP4-201ENST00000378156 ARHGAP4P98171 946 aa16.27■□□□□ 0.2
NPHP4-201ENST00000378156 KRT81Q14533 505 aa16.27■□□□□ 0.2
NPHP4-201ENST00000378156 MESDQ14696 234 aa16.27■□□□□ 0.2
NPHP4-201ENST00000378156 BARGINQ6ZT62 677 aa16.27■□□□□ 0.2
NPHP4-201ENST00000378156 LINC00116Q8NCU8 138 aa16.27■□□□□ 0.2
NPHP4-201ENST00000378156 WRNIP1Q96S55 665 aa16.27■□□□□ 0.2
NPHP4-201ENST00000378156 GCNT4Q9P109 453 aa16.27■□□□□ 0.2
NPHP4-201ENST00000378156 TTLL3Q9Y4R7 772 aa16.27■□□□□ 0.2
NPHP4-201ENST00000378156 UBE2Q2LH0YL09 131 aa16.27■□□□□ 0.2
NPHP4-201ENST00000378156 LIG3P49916 1009 aa16.27■□□□□ 0.2
NPHP4-201ENST00000378156 RNF168Q8IYW5 571 aaPredicted RBP16.27■□□□□ 0.2
NPHP4-201ENST00000378156 EXOC4Q96A65 974 aa16.27■□□□□ 0.2
NPHP4-201ENST00000378156 FAM20AQ96MK3 541 aa16.27■□□□□ 0.2
NPHP4-201ENST00000378156 FEM1BQ9UK73 627 aa16.27■□□□□ 0.2
NPHP4-201ENST00000378156 AK9Q5TCS8 1911 aa16.27■□□□□ 0.2
NPHP4-201ENST00000378156 GFPT2O94808 682 aa16.27■□□□□ 0.19
NPHP4-201ENST00000378156 NTSR2O95665 410 aa16.27■□□□□ 0.19
NPHP4-201ENST00000378156 AKR1B1P15121 316 aa16.27■□□□□ 0.19
NPHP4-201ENST00000378156 GRIN1Q05586 938 aa16.27■□□□□ 0.19
NPHP4-201ENST00000378156 QRICH1Q2TAL8 776 aa16.27■□□□□ 0.19
NPHP4-201ENST00000378156 AFAP1L2Q8N4X5 818 aa16.27■□□□□ 0.19
NPHP4-201ENST00000378156 GBP7Q8N8V2 638 aaPredicted RBP16.27■□□□□ 0.19
NPHP4-201ENST00000378156 VPS37BQ9H9H4 285 aa16.27■□□□□ 0.19
NPHP4-201ENST00000378156 TROVE2P10155 538 aaKnown RBP eCLIP16.27■□□□□ 0.19
NPHP4-201ENST00000378156 ADCY8P40145 1251 aa16.27■□□□□ 0.19
NPHP4-201ENST00000378156 ALCAMQ13740 583 aa16.27■□□□□ 0.19
NPHP4-201ENST00000378156 SPOUT1Q5T280 376 aaKnown RBP16.27■□□□□ 0.19
NPHP4-201ENST00000378156 PIGOQ8TEQ8 1089 aa16.27■□□□□ 0.19
NPHP4-201ENST00000378156 GRK7Q8WTQ7 553 aa16.27■□□□□ 0.19
NPHP4-201ENST00000378156 FAM81BQ96LP2 452 aa16.27■□□□□ 0.19
NPHP4-201ENST00000378156 APOL6Q9BWW8 343 aa16.27■□□□□ 0.19
NPHP4-201ENST00000378156 HOXC10Q9NYD6 342 aa16.27■□□□□ 0.19
NPHP4-201ENST00000378156 TLR3O15455 904 aaKnown RBP16.26■□□□□ 0.19
NPHP4-201ENST00000378156 SERPING1P05155 500 aa16.26■□□□□ 0.19
NPHP4-201ENST00000378156 EN1Q05925 392 aaPredicted RBP16.26■□□□□ 0.19
NPHP4-201ENST00000378156 ANKRD42Q8N9B4 389 aa16.26■□□□□ 0.19
NPHP4-201ENST00000378156 P3H4Q92791 437 aa16.26■□□□□ 0.19
NPHP4-201ENST00000378156 STX2P32856 288 aa16.26■□□□□ 0.19
NPHP4-201ENST00000378156 SPP2Q13103 211 aa16.26■□□□□ 0.19
NPHP4-201ENST00000378156 TBC1D31Q96DN5 1066 aa16.26■□□□□ 0.19
NPHP4-201ENST00000378156 ANKRD36BP1Q96IX9 119 aa16.26■□□□□ 0.19
NPHP4-201ENST00000378156 PHF20Q9BVI0 1012 aa16.26■□□□□ 0.19
NPHP4-201ENST00000378156 CERKQ8TCT0 537 aa16.26■□□□□ 0.19
NPHP4-201ENST00000378156 HERC5Q9UII4 1024 aaKnown RBP16.26■□□□□ 0.19
NPHP4-201ENST00000378156 NUB1Q9Y5A7 615 aa16.26■□□□□ 0.19
NPHP4-201ENST00000378156 ITSN1Q15811 1721 aa16.26■□□□□ 0.19
NPHP4-201ENST00000378156 TFAMQ00059 246 aaKnown RBP16.26■□□□□ 0.19
NPHP4-201ENST00000378156 ORC2Q13416 577 aaPredicted RBP16.26■□□□□ 0.19
NPHP4-201ENST00000378156 MUM1Q2TAK8 710 aa16.26■□□□□ 0.19
NPHP4-201ENST00000378156 AP1ARQ63HQ0 302 aa16.26■□□□□ 0.19
NPHP4-201ENST00000378156 EFCAB13Q8IY85 973 aa16.26■□□□□ 0.19
NPHP4-201ENST00000378156 HDAC6Q9UBN7 1215 aa16.26■□□□□ 0.19
NPHP4-201ENST00000378156 MRFAP1Q9Y605 127 aa16.26■□□□□ 0.19
NPHP4-201ENST00000378156 MROH1Q8NDA8 1641 aa16.26■□□□□ 0.19
NPHP4-201ENST00000378156 SFI1A8K8P3 1242 aa16.25■□□□□ 0.19
NPHP4-201ENST00000378156 K7ERI5 159 aa16.25■□□□□ 0.19
NPHP4-201ENST00000378156 MTMR1Q13613 665 aa16.25■□□□□ 0.19
NPHP4-201ENST00000378156 BANK1Q8NDB2 785 aa16.25■□□□□ 0.19
NPHP4-201ENST00000378156 RPS6KC1Q96S38 1066 aa16.25■□□□□ 0.19
NPHP4-201ENST00000378156 RAVER2Q9HCJ3 691 aaKnown RBP16.25■□□□□ 0.19
NPHP4-201ENST00000378156 LLGL1Q15334 1064 aa16.25■□□□□ 0.19
NPHP4-201ENST00000378156 BSPRYQ5W0U4 402 aa16.25■□□□□ 0.19
NPHP4-201ENST00000378156 TRIM50Q86XT4 487 aa16.25■□□□□ 0.19
NPHP4-201ENST00000378156 ADGRF4Q8IZF3 695 aa16.25■□□□□ 0.19
NPHP4-201ENST00000378156 KIF20BQ96Q89 1820 aa16.25■□□□□ 0.19
NPHP4-201ENST00000378156 CHRNA5P30532 468 aa16.25■□□□□ 0.19
NPHP4-201ENST00000378156 PRPF38AQ8NAV1 312 aaKnown RBP16.25■□□□□ 0.19
NPHP4-201ENST00000378156 FBXO40Q9UH90 709 aa16.25■□□□□ 0.19
NPHP4-201ENST00000378156 ADAM21Q9UKJ8 722 aa16.25■□□□□ 0.19
NPHP4-201ENST00000378156 TADA3O75528 432 aa16.25■□□□□ 0.19
NPHP4-201ENST00000378156 RSPH3Q86UC2 560 aa16.25■□□□□ 0.19
NPHP4-201ENST00000378156 POLD4Q9HCU8 107 aa16.25■□□□□ 0.19
NPHP4-201ENST00000378156 UBE2TQ9NPD8 197 aaPredicted RBP16.25■□□□□ 0.19
NPHP4-201ENST00000378156 DAGLAQ9Y4D2 1042 aa16.25■□□□□ 0.19
NPHP4-201ENST00000378156 SPATA31A5Q5VU36 1347 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 SPATA31A7Q8IWB4 1347 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 A0A1B0GTH6 734 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 LRRC53A6NM62 1247 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 PEX3P56589 373 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 ZNF653Q96CK0 615 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 FAM193BQ96PV7 902 aaPredicted RBP16.24■□□□□ 0.19
NPHP4-201ENST00000378156 PNMA3Q9UL41 463 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 PVALEFA0A1B0GWK0 134 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 PGRMC1O00264 195 aaKnown RBP16.24■□□□□ 0.19
NPHP4-201ENST00000378156 FCER1AP12319 257 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 SNCBQ16143 134 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 CTAGE3PQ8IX95 158 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 ZNF148Q9UQR1 794 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 CD2APQ9Y5K6 639 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 MORC2Q9Y6X9 1032 aaPredicted RBP16.24■□□□□ 0.19
NPHP4-201ENST00000378156 E9PMD0 336 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 JAK3P52333 1124 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 HNRNPH2P55795 449 aaKnown RBP16.24■□□□□ 0.19
NPHP4-201ENST00000378156 HAUS1Q96CS2 278 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 TRIM11Q96F44 468 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 RIMBP3CA6NJZ7 1639 aa16.24■□□□□ 0.19
NPHP4-201ENST00000378156 RIMBP3BA6NNM3 1639 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms