RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 YTHDF3Q7Z739 585 aaKnown RBP19.66■□□□□ 0.74
GNE-201ENST00000377902 SPATS2Q86XZ4 545 aaKnown RBP19.66■□□□□ 0.74
GNE-201ENST00000377902 MDM1Q8TC05 714 aa19.66■□□□□ 0.74
GNE-201ENST00000377902 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.66■□□□□ 0.74
GNE-201ENST00000377902 OSBPL7Q9BZF2 842 aa19.66■□□□□ 0.74
GNE-201ENST00000377902 SBF2Q86WG5 1849 aa19.66■□□□□ 0.74
GNE-201ENST00000377902 DNM1LO00429 736 aa19.66■□□□□ 0.74
GNE-201ENST00000377902 RAD21O60216 631 aa19.66■□□□□ 0.74
GNE-201ENST00000377902 MAGOHP61326 146 aaKnown RBP19.66■□□□□ 0.74
GNE-201ENST00000377902 KCNA1Q09470 495 aa19.66■□□□□ 0.74
GNE-201ENST00000377902 CUL1Q13616 776 aa19.66■□□□□ 0.74
GNE-201ENST00000377902 FOXR2Q6PJQ5 311 aa19.66■□□□□ 0.74
GNE-201ENST00000377902 MAGOHBQ96A72 148 aaKnown RBP19.66■□□□□ 0.74
GNE-201ENST00000377902 PBKQ96KB5 322 aa19.66■□□□□ 0.74
GNE-201ENST00000377902 TRIM51Q9BSJ1 452 aa19.66■□□□□ 0.74
GNE-201ENST00000377902 CD209Q9NNX6 404 aa19.66■□□□□ 0.74
GNE-201ENST00000377902 OSGEPQ9NPF4 335 aa19.66■□□□□ 0.74
GNE-201ENST00000377902 PNMA6FA0A0J9YX94 578 aa19.65■□□□□ 0.74
GNE-201ENST00000377902 PHF20L1A8MW92 1017 aa19.65■□□□□ 0.74
GNE-201ENST00000377902 TRAPPC3O43617 180 aa19.65■□□□□ 0.74
GNE-201ENST00000377902 AKAP3O75969 853 aa19.65■□□□□ 0.74
GNE-201ENST00000377902 NOVP48745 357 aa19.65■□□□□ 0.74
GNE-201ENST00000377902 GPSM2P81274 684 aa19.65■□□□□ 0.74
GNE-201ENST00000377902 PABPC4Q13310 644 aaKnown RBP eCLIP19.65■□□□□ 0.74
GNE-201ENST00000377902 EXOC3L4Q17RC7 722 aa19.65■□□□□ 0.74
GNE-201ENST00000377902 LRIG3Q6UXM1 1119 aa19.65■□□□□ 0.74
GNE-201ENST00000377902 CCDC91Q7Z6B0 441 aa19.65■□□□□ 0.74
GNE-201ENST00000377902 DAAM2Q86T65 1068 aa19.65■□□□□ 0.74
GNE-201ENST00000377902 C1orf131Q8NDD1 294 aaKnown RBP19.65■□□□□ 0.74
GNE-201ENST00000377902 PSTPIP2Q9H939 334 aa19.65■□□□□ 0.74
GNE-201ENST00000377902 ARMCX3Q9UH62 379 aaPredicted RBP19.65■□□□□ 0.74
GNE-201ENST00000377902 RTCBQ9Y3I0 505 aaKnown RBP19.65■□□□□ 0.74
GNE-201ENST00000377902 COL16A1Q07092 1604 aaPredicted RBP19.65■□□□□ 0.74
GNE-201ENST00000377902 SEPT2Q15019 361 aa19.65■□□□□ 0.74
GNE-201ENST00000377902 RAPGEF5Q92565 580 aa19.65■□□□□ 0.74
GNE-201ENST00000377902 CUL5Q93034 780 aa19.65■□□□□ 0.74
GNE-201ENST00000377902 MYCBPQ99417 103 aaPredicted RBP19.65■□□□□ 0.74
GNE-201ENST00000377902 KLC4Q9NSK0 619 aa19.65■□□□□ 0.74
GNE-201ENST00000377902 RSPH10B2B2RC85 870 aa19.64■□□□□ 0.73
GNE-201ENST00000377902 CLIC2O15247 247 aa19.64■□□□□ 0.73
GNE-201ENST00000377902 RSPH10BP0C881 870 aa19.64■□□□□ 0.73
GNE-201ENST00000377902 SLC12A3P55017 1021 aa19.64■□□□□ 0.73
GNE-201ENST00000377902 DHX9Q08211 1270 aaKnown RBP19.64■□□□□ 0.73
GNE-201ENST00000377902 ASPRV1Q53RT3 343 aa19.64■□□□□ 0.73
GNE-201ENST00000377902 MFSD14BQ5SR56 506 aa19.64■□□□□ 0.73
GNE-201ENST00000377902 LRRC45Q96CN5 670 aa19.64■□□□□ 0.73
GNE-201ENST00000377902 NT5C3AQ9H0P0 336 aa19.64■□□□□ 0.73
GNE-201ENST00000377902 LEMD3Q9Y2U8 911 aa19.64■□□□□ 0.73
GNE-201ENST00000377902 COL5A3P25940 1745 aaPredicted RBP19.64■□□□□ 0.73
GNE-201ENST00000377902 DDX3XO00571 662 aaKnown RBP eCLIP19.64■□□□□ 0.734e-20■■■■■ 36.3
GNE-201ENST00000377902 USP8P40818 1118 aa19.64■□□□□ 0.73
GNE-201ENST00000377902 BYSLQ13895 437 aaKnown RBP19.64■□□□□ 0.73
GNE-201ENST00000377902 HYIQ5T013 277 aa19.64■□□□□ 0.73
GNE-201ENST00000377902 TMC3Q7Z5M5 1100 aa19.64■□□□□ 0.73
GNE-201ENST00000377902 SFR1Q86XK3 245 aa19.64■□□□□ 0.73
GNE-201ENST00000377902 U2AF1L4Q8WU68 220 aaKnown RBP19.64■□□□□ 0.73
GNE-201ENST00000377902 SLC40A1Q9NP59 571 aa19.64■□□□□ 0.73
GNE-201ENST00000377902 WNK3Q9BYP7 1800 aa19.63■□□□□ 0.73
GNE-201ENST00000377902 BTNL10A8MVZ5 291 aa19.63■□□□□ 0.73
GNE-201ENST00000377902 AFPP02771 609 aaKnown RBP19.63■□□□□ 0.73
GNE-201ENST00000377902 PPP2R2AP63151 447 aa19.63■□□□□ 0.73
GNE-201ENST00000377902 ZNF543Q08ER8 600 aa19.63■□□□□ 0.73
GNE-201ENST00000377902 CDCA7Q9BWT1 371 aaPredicted RBP19.63■□□□□ 0.73
GNE-201ENST00000377902 ATP8A1Q9Y2Q0 1164 aa19.63■□□□□ 0.73
GNE-201ENST00000377902 BHMG1C9JSJ3 638 aaPredicted RBP19.63■□□□□ 0.73
GNE-201ENST00000377902 F8W031 263 aaPredicted RBP19.63■□□□□ 0.73
GNE-201ENST00000377902 hCG_1984214I3L0E3 225 aa19.63■□□□□ 0.73
GNE-201ENST00000377902 CES2O00748 559 aa19.63■□□□□ 0.73
GNE-201ENST00000377902 RASSF9O75901 435 aa19.63■□□□□ 0.73
GNE-201ENST00000377902 GFPT2O94808 682 aa19.63■□□□□ 0.73
GNE-201ENST00000377902 UFL1O94874 794 aa19.63■□□□□ 0.73
GNE-201ENST00000377902 CLSTN1O94985 981 aa19.63■□□□□ 0.73
GNE-201ENST00000377902 SNHG28P0DPA3 235 aa19.63■□□□□ 0.73
GNE-201ENST00000377902 KRT71Q3SY84 523 aa19.63■□□□□ 0.73
GNE-201ENST00000377902 CCDC121Q6ZUS5 278 aa19.63■□□□□ 0.73
GNE-201ENST00000377902 NT5DC3Q86UY8 548 aa19.63■□□□□ 0.73
GNE-201ENST00000377902 CATSPER3Q86XQ3 398 aa19.63■□□□□ 0.73
GNE-201ENST00000377902 ZC3H3Q8IXZ2 948 aaKnown RBP19.63■□□□□ 0.73
GNE-201ENST00000377902 ARFGAP2Q8N6H7 521 aa19.63■□□□□ 0.73
GNE-201ENST00000377902 ZNF713Q8N859 430 aaPredicted RBP19.63■□□□□ 0.73
GNE-201ENST00000377902 ZKSCAN4Q969J2 545 aaPredicted RBP19.63■□□□□ 0.73
GNE-201ENST00000377902 SEC16BQ96JE7 1060 aa19.63■□□□□ 0.73
GNE-201ENST00000377902 DHX36Q9H2U1 1008 aaKnown RBP19.63■□□□□ 0.73
GNE-201ENST00000377902 SIX2Q9NPC8 291 aa19.63■□□□□ 0.73
GNE-201ENST00000377902 STXBP5LQ9Y2K9 1186 aa19.63■□□□□ 0.73
GNE-201ENST00000377902 SFI1A8K8P3 1242 aa19.62■□□□□ 0.73
GNE-201ENST00000377902 XRCC5P13010 732 aaKnown RBP19.62■□□□□ 0.73
GNE-201ENST00000377902 GSCP56915 257 aaPredicted RBP19.62■□□□□ 0.73
GNE-201ENST00000377902 GRAPQ13588 217 aa19.62■□□□□ 0.73
GNE-201ENST00000377902 GIT2Q14161 759 aa19.62■□□□□ 0.73
GNE-201ENST00000377902 GRAPLQ8TC17 118 aaPredicted RBP19.62■□□□□ 0.73
GNE-201ENST00000377902 CCDC114Q96M63 670 aa19.62■□□□□ 0.73
GNE-201ENST00000377902 REEP2Q9BRK0 252 aa19.62■□□□□ 0.73
GNE-201ENST00000377902 FGGP02679 453 aa19.62■□□□□ 0.73
GNE-201ENST00000377902 POLD1P28340 1107 aa19.62■□□□□ 0.73
GNE-201ENST00000377902 PRPF4BQ13523 1007 aaKnown RBP19.62■□□□□ 0.73
GNE-201ENST00000377902 EPHA7Q15375 998 aa19.62■□□□□ 0.73
GNE-201ENST00000377902 KNOP1Q1ED39 458 aaKnown RBP19.62■□□□□ 0.73
GNE-201ENST00000377902 EDRF1Q3B7T1 1238 aa19.62■□□□□ 0.73
GNE-201ENST00000377902 PCDHB13Q9Y5F0 798 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms