RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 MYOGP15173 224 aa19.03■□□□□ 0.64
HMGN4-201ENST00000377575 CYP3A7P24462 503 aa19.03■□□□□ 0.64
HMGN4-201ENST00000377575 DEFB103AP81534 67 aa19.03■□□□□ 0.64
HMGN4-201ENST00000377575 TCTN1Q2MV58 587 aa19.03■□□□□ 0.64
HMGN4-201ENST00000377575 LRCH2Q5VUJ6 765 aa19.03■□□□□ 0.64
HMGN4-201ENST00000377575 SWSAP1Q6NVH7 229 aa19.03■□□□□ 0.64
HMGN4-201ENST00000377575 CKAP2LQ8IYA6 745 aa19.03■□□□□ 0.64
HMGN4-201ENST00000377575 DBF4BQ8NFT6 615 aa19.03■□□□□ 0.64
HMGN4-201ENST00000377575 DNAJB3Q8WWF6 145 aa19.03■□□□□ 0.64
HMGN4-201ENST00000377575 TEKT3Q9BXF9 490 aa19.03■□□□□ 0.64
HMGN4-201ENST00000377575 BRMS1Q9HCU9 246 aa19.03■□□□□ 0.64
HMGN4-201ENST00000377575 EVPLQ92817 2033 aa19.03■□□□□ 0.64
HMGN4-201ENST00000377575 EYSQ5T1H1 3165 aa19.03■□□□□ 0.64
HMGN4-201ENST00000377575 M0QZ92 97 aa19.02■□□□□ 0.64
HMGN4-201ENST00000377575 EDIL3O43854 480 aa19.02■□□□□ 0.64
HMGN4-201ENST00000377575 TLL1O43897 1013 aa19.02■□□□□ 0.64
HMGN4-201ENST00000377575 AMHP03971 560 aa19.02■□□□□ 0.64
HMGN4-201ENST00000377575 SFNP31947 248 aa19.02■□□□□ 0.64
HMGN4-201ENST00000377575 INF2Q27J81 1249 aa19.02■□□□□ 0.64
HMGN4-201ENST00000377575 NSUN7Q8NE18 718 aaKnown RBP19.02■□□□□ 0.64
HMGN4-201ENST00000377575 MAFAQ8NHW3 353 aaPredicted RBP19.02■□□□□ 0.64
HMGN4-201ENST00000377575 SLC5A5Q92911 643 aa19.02■□□□□ 0.64
HMGN4-201ENST00000377575 ZBED2Q9BTP6 218 aa19.02■□□□□ 0.64
HMGN4-201ENST00000377575 IFIH1Q9BYX4 1025 aaKnown RBP19.02■□□□□ 0.64
HMGN4-201ENST00000377575 FAM49AQ9H0Q0 323 aaPredicted RBP19.02■□□□□ 0.64
HMGN4-201ENST00000377575 PCDHA2Q9Y5H9 948 aa19.02■□□□□ 0.64
HMGN4-201ENST00000377575 CHD7Q9P2D1 2997 aa19.02■□□□□ 0.63
HMGN4-201ENST00000377575 IGSF9BQ9UPX0 1349 aa19.01■□□□□ 0.63
HMGN4-201ENST00000377575 TDP2O95551 362 aa19.01■□□□□ 0.63
HMGN4-201ENST00000377575 CHRNA1P02708 482 aa19.01■□□□□ 0.63
HMGN4-201ENST00000377575 JAK3P52333 1124 aa19.01■□□□□ 0.63
HMGN4-201ENST00000377575 MRPS6P82932 125 aaKnown RBP19.01■□□□□ 0.63
HMGN4-201ENST00000377575 MGAT3Q09327 533 aa19.01■□□□□ 0.63
HMGN4-201ENST00000377575 ZNF484Q5JVG2 852 aa19.01■□□□□ 0.63
HMGN4-201ENST00000377575 IER5Q5VY09 327 aa19.01■□□□□ 0.63
HMGN4-201ENST00000377575 MTHFD1LQ6UB35 978 aa19.01■□□□□ 0.63
HMGN4-201ENST00000377575 TRAPPC12Q8WVT3 735 aa19.01■□□□□ 0.63
HMGN4-201ENST00000377575 BBXQ8WY36 941 aaPredicted RBP19.01■□□□□ 0.63
HMGN4-201ENST00000377575 FAM167AQ96KS9 214 aa19.01■□□□□ 0.63
HMGN4-201ENST00000377575 PRDM12Q9H4Q4 367 aa19.01■□□□□ 0.63
HMGN4-201ENST00000377575 DDX25Q9UHL0 483 aaKnown RBP19.01■□□□□ 0.63
HMGN4-201ENST00000377575 LIMCH1Q9UPQ0 1083 aa19.01■□□□□ 0.63
HMGN4-201ENST00000377575 MAFBQ9Y5Q3 323 aaPredicted RBP19.01■□□□□ 0.63
HMGN4-201ENST00000377575 CDY2AQ9Y6F7 541 aa19.01■□□□□ 0.63
HMGN4-201ENST00000377575 SMIM35A0A1B0GVV1 85 aa19■□□□□ 0.63
HMGN4-201ENST00000377575 CHMP2AO43633 222 aa19■□□□□ 0.63
HMGN4-201ENST00000377575 GJB5O95377 273 aa19■□□□□ 0.63
HMGN4-201ENST00000377575 GHRP10912 638 aa19■□□□□ 0.63
HMGN4-201ENST00000377575 GCFC2P16383 781 aaKnown RBP19■□□□□ 0.63
HMGN4-201ENST00000377575 KRT2P35908 639 aa19■□□□□ 0.63
HMGN4-201ENST00000377575 MKRN4PQ13434 485 aaPredicted RBP19■□□□□ 0.63
HMGN4-201ENST00000377575 TRIM29Q14134 588 aa19■□□□□ 0.63
HMGN4-201ENST00000377575 LETM2Q2VYF4 491 aa19■□□□□ 0.63
HMGN4-201ENST00000377575 NEK8Q86SG6 692 aa19■□□□□ 0.63
HMGN4-201ENST00000377575 SLC17A8Q8NDX2 589 aa19■□□□□ 0.63
HMGN4-201ENST00000377575 RDM1Q8NG50 284 aa19■□□□□ 0.63
HMGN4-201ENST00000377575 MBOAT7Q96N66 472 aa19■□□□□ 0.63
HMGN4-201ENST00000377575 NAP1L4Q99733 375 aaKnown RBP19■□□□□ 0.63
HMGN4-201ENST00000377575 DISC1Q9NRI5 854 aa19■□□□□ 0.63
HMGN4-201ENST00000377575 GABBR1Q9UBS5 961 aa19■□□□□ 0.63
HMGN4-201ENST00000377575 CEP131Q9UPN4 1083 aa19■□□□□ 0.63
HMGN4-201ENST00000377575 COL4A4P53420 1690 aaPredicted RBP19■□□□□ 0.63
HMGN4-201ENST00000377575 FDPSP14324 419 aaKnown RBP18.99■□□□□ 0.63
HMGN4-201ENST00000377575 TSHZ1Q6ZSZ6 1077 aa18.99■□□□□ 0.63
HMGN4-201ENST00000377575 PIK3AP1Q6ZUJ8 805 aa18.99■□□□□ 0.63
HMGN4-201ENST00000377575 MYOCDQ8IZQ8 938 aa18.99■□□□□ 0.63
HMGN4-201ENST00000377575 NME8Q8N427 588 aa18.99■□□□□ 0.63
HMGN4-201ENST00000377575 ETNPPLQ8TBG4 499 aa18.99■□□□□ 0.63
HMGN4-201ENST00000377575 ZBTB10Q96DT7 871 aa18.99■□□□□ 0.63
HMGN4-201ENST00000377575 RAD9AQ99638 391 aa18.99■□□□□ 0.63
HMGN4-201ENST00000377575 GJB4Q9NTQ9 266 aa18.99■□□□□ 0.63
HMGN4-201ENST00000377575 TRPV2Q9Y5S1 764 aa18.99■□□□□ 0.63
HMGN4-201ENST00000377575 DTNBO60941 627 aa18.98■□□□□ 0.63
HMGN4-201ENST00000377575 PSMD10O75832 226 aa18.98■□□□□ 0.63
HMGN4-201ENST00000377575 LPIN1Q14693 890 aa18.98■□□□□ 0.63
HMGN4-201ENST00000377575 FBXO47Q5MNV8 452 aa18.98■□□□□ 0.63
HMGN4-201ENST00000377575 PPP4R3AQ6IN85 833 aa18.98■□□□□ 0.63
HMGN4-201ENST00000377575 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.98■□□□□ 0.633e-7■■■□□ 18
HMGN4-201ENST00000377575 MIER3Q7Z3K6 550 aa18.98■□□□□ 0.63
HMGN4-201ENST00000377575 TMCO2Q7Z6W1 182 aaPredicted RBP18.98■□□□□ 0.63
HMGN4-201ENST00000377575 USP38Q8NB14 1042 aa18.98■□□□□ 0.63
HMGN4-201ENST00000377575 OXER1Q8TDS5 423 aa18.98■□□□□ 0.63
HMGN4-201ENST00000377575 UNC45AQ9H3U1 944 aa18.98■□□□□ 0.63
HMGN4-201ENST00000377575 SQORQ9Y6N5 450 aa18.98■□□□□ 0.63
HMGN4-201ENST00000377575 SLC37A4O43826 429 aa18.97■□□□□ 0.63
HMGN4-201ENST00000377575 JAK2O60674 1132 aa18.97■□□□□ 0.63
HMGN4-201ENST00000377575 ATP4AP20648 1035 aa18.97■□□□□ 0.63
HMGN4-201ENST00000377575 KLRC1P26715 233 aa18.97■□□□□ 0.63
HMGN4-201ENST00000377575 RBM25P49756 843 aaKnown RBP18.97■□□□□ 0.63
HMGN4-201ENST00000377575 PRKCEQ02156 737 aa18.97■□□□□ 0.63
HMGN4-201ENST00000377575 TAP1Q03518 808 aa18.97■□□□□ 0.63
HMGN4-201ENST00000377575 ZSCAN31Q96LW9 406 aaPredicted RBP18.97■□□□□ 0.63
HMGN4-201ENST00000377575 OSBPL7Q9BZF2 842 aa18.97■□□□□ 0.63
HMGN4-201ENST00000377575 UPF2Q9HAU5 1272 aaKnown RBP18.97■□□□□ 0.63
HMGN4-201ENST00000377575 SH2B1Q9NRF2 756 aaPredicted RBP18.97■□□□□ 0.63
HMGN4-201ENST00000377575 COL4A6Q14031 1691 aa18.97■□□□□ 0.63
HMGN4-201ENST00000377575 TRANK1O15050 2925 aa18.97■□□□□ 0.63
HMGN4-201ENST00000377575 NLRC5Q86WI3 1866 aa18.97■□□□□ 0.63
HMGN4-201ENST00000377575 ZBTB42B2RXF5 422 aa18.96■□□□□ 0.63
HMGN4-201ENST00000377575 CCNT1O60563 726 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms