RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 INO80BQ9C086 356 aaPredicted RBP20.21■□□□□ 0.83
CNTNAP3B-203ENST00000377561 H7C0C1 242 aa20.21■□□□□ 0.83
CNTNAP3B-203ENST00000377561 KCNQ2O43526 872 aa20.21■□□□□ 0.83
CNTNAP3B-203ENST00000377561 ATP5OP48047 213 aa20.21■□□□□ 0.83
CNTNAP3B-203ENST00000377561 KCNJ6P48051 423 aa20.21■□□□□ 0.83
CNTNAP3B-203ENST00000377561 SNX1Q13596 522 aa20.21■□□□□ 0.83
CNTNAP3B-203ENST00000377561 RPS6KA2Q15349 733 aa20.21■□□□□ 0.83
CNTNAP3B-203ENST00000377561 ADGRF4Q8IZF3 695 aa20.21■□□□□ 0.83
CNTNAP3B-203ENST00000377561 AP1M1Q9BXS5 423 aa20.21■□□□□ 0.83
CNTNAP3B-203ENST00000377561 DNAJC12Q9UKB3 198 aa20.21■□□□□ 0.83
CNTNAP3B-203ENST00000377561 POTEB3A0JP26 581 aa20.21■□□□□ 0.83
CNTNAP3B-203ENST00000377561 POTECB2RU33 542 aa20.21■□□□□ 0.83
CNTNAP3B-203ENST00000377561 SGK1O00141 431 aa20.21■□□□□ 0.83
CNTNAP3B-203ENST00000377561 FDPSP14324 419 aaKnown RBP20.21■□□□□ 0.83
CNTNAP3B-203ENST00000377561 DR1Q01658 176 aa20.21■□□□□ 0.83
CNTNAP3B-203ENST00000377561 KCNH2Q12809 1159 aa20.21■□□□□ 0.83
CNTNAP3B-203ENST00000377561 TTBK2Q6IQ55 1244 aa20.21■□□□□ 0.83
CNTNAP3B-203ENST00000377561 POTEBQ6S5H4 581 aa20.21■□□□□ 0.83
CNTNAP3B-203ENST00000377561 PHLDB2Q86SQ0 1253 aa20.21■□□□□ 0.83
CNTNAP3B-203ENST00000377561 PALM3A6NDB9 673 aaPredicted RBP20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 DPF2Q92785 391 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 ZNF341Q9BYN7 854 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 TUBE1Q9UJT0 475 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 DIS3Q9Y2L1 958 aaKnown RBP20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 IL9RQ01113 521 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 CCDC197Q8NCU1 140 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 KCNB2Q92953 911 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 BCAP29Q9UHQ4 241 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 ANAPC5Q9UJX4 755 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 CTDNEP1O95476 244 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 JAK3P52333 1124 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 RFX6Q8HWS3 928 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 LRRC8CQ8TDW0 803 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 ZNF277Q9NRM2 450 aaPredicted RBP20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 PREX1Q8TCU6 1659 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 ITSN1Q15811 1721 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 SRGAP2O75044 1071 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 SUN1O94901 812 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 OATP04181 439 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 FAM83BQ5T0W9 1011 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 DPY19L2Q6NUT2 758 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 ARHGAP27Q6ZUM4 889 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 RNF10Q8N5U6 811 aaKnown RBP20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 FMO2Q99518 471 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 CCSER1Q9C0I3 900 aa20.2■□□□□ 0.82
CNTNAP3B-203ENST00000377561 KNOP1Q1ED39 458 aaKnown RBP20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 QRICH1Q2TAL8 776 aa20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 CEP120Q8N960 986 aa20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 PPP4R1Q8TF05 950 aa20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 CNOT10Q9H9A5 744 aaKnown RBP20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 MYO3BQ8WXR4 1341 aa20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 POC1B-GALNT4F8VUJ3 575 aa20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 TDP2O95551 362 aa20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 EIF3BP55884 814 aaKnown RBP20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 PEX3P56589 373 aa20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 CIAPIN1Q6FI81 312 aa20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 TTLL6Q8N841 843 aa20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 NEK9Q8TD19 979 aa20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 NFU1Q9UMS0 254 aa20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 RRP15Q9Y3B9 282 aaKnown RBP20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 CEP170BQ9Y4F5 1589 aaPredicted RBP20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 TLR3O15455 904 aaKnown RBP20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 CAMTA2O94983 1202 aa20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 ABL1P00519 1130 aa20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 CNGA1P29973 690 aa20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 IFNAR2P48551 515 aa20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 DNAJC24Q6P3W2 148 aa20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 TAB3Q8N5C8 712 aaPredicted RBP20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 TDRD3Q9H7E2 651 aaKnown RBP20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 CPSF2Q9P2I0 782 aaKnown RBP20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 LIMA1Q9UHB6 759 aaKnown RBP20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 GOLGA8IPA6NC78 632 aa20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 GOLGA8JA6NMD2 632 aa20.19■□□□□ 0.82
CNTNAP3B-203ENST00000377561 RNF207Q6ZRF8 634 aa20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 EPB41L4AQ9HCS5 686 aaPredicted RBP20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 CD163L1Q9NR16 1453 aa20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 DIP2BQ9P265 1576 aa20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 A0A1B0GTH6 734 aa20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 A6NJR5 290 aa20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 ZNF233A6NK53 670 aa20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 KRT1P04264 644 aa20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 USP11P51784 963 aa20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 CCZ1BP86790 482 aa20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 CCZ1P86791 482 aaPredicted RBP20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 CCHCR1Q8TD31 782 aa20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 MYCBPQ99417 103 aaPredicted RBP20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 TXNDC9O14530 226 aa20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 YWHAGP61981 247 aaKnown RBP eCLIP20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 GFPT1Q06210 699 aaPredicted RBP20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 NAALADL2Q58DX5 795 aa20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 IFT122Q9HBG6 1241 aa20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 FEM1BQ9UK73 627 aa20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 MRFAP1Q9Y605 127 aa20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 COL3A1P02461 1466 aaPredicted RBP20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 KIF3CO14782 793 aa20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 TFAMQ00059 246 aaKnown RBP20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 IFT88Q13099 833 aa20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 NFIXQ14938 502 aa20.18■□□□□ 0.82
CNTNAP3B-203ENST00000377561 ARMC9Q7Z3E5 817 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms