RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 PRKCEQ02156 737 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 POSTNQ15063 836 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 DGKDQ16760 1214 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 SLC9C1Q4G0N8 1177 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 BRDTQ58F21 947 aaPredicted RBP14.45□□□□□ -0.1
CBWD3-203ENST00000377344 MAP3K21Q5TCX8 1036 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 PCYT2Q99447 389 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 MAGEF1Q9HAY2 307 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 Q9Y3F1 56 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 MAFBQ9Y5Q3 323 aaPredicted RBP14.45□□□□□ -0.1
CBWD3-203ENST00000377344 IGSF9BQ9UPX0 1349 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 IGKV6D-21A0A0A0MT36 114 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 TMEM150BA6NC51 233 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 CTAGE5O15320 804 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 ZNF862O60290 1169 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 PPFIA4O75335 1185 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 EYA4O95677 639 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 MMP3P08254 477 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 C6orf222P0C671 652 aaPredicted RBP14.45□□□□□ -0.1
CBWD3-203ENST00000377344 ZNF286BP0CG31 522 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 MARK3P27448 753 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 CASP1P29466 404 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 CPT1AP50416 773 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 AMPD3Q01432 767 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 KCTD17Q8N5Z5 321 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 BLZF1Q9H2G9 400 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 SMARCAD1Q9H4L7 1026 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 SPC25Q9HBM1 224 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 HMX1Q9NP08 348 aaPredicted RBP14.45□□□□□ -0.1
CBWD3-203ENST00000377344 KBTBD4Q9NVX7 518 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 SEPT9Q9UHD8 586 aaPredicted RBP14.45□□□□□ -0.1
CBWD3-203ENST00000377344 ARHGEF35A5YM69 484 aa14.44□□□□□ -0.1
CBWD3-203ENST00000377344 LYPLA2O95372 231 aa14.44□□□□□ -0.1
CBWD3-203ENST00000377344 PGK1P00558 417 aa14.44□□□□□ -0.1
CBWD3-203ENST00000377344 MYCP01106 439 aaPredicted RBP14.44□□□□□ -0.1
CBWD3-203ENST00000377344 LGALS2P05162 132 aa14.44□□□□□ -0.1
CBWD3-203ENST00000377344 PRR29P0C7W0 189 aa14.44□□□□□ -0.1
CBWD3-203ENST00000377344 IRX5P78411 483 aaPredicted RBP14.44□□□□□ -0.1
CBWD3-203ENST00000377344 BEX3Q00994 111 aa14.44□□□□□ -0.1
CBWD3-203ENST00000377344 OTUD6AQ7L8S5 288 aa14.44□□□□□ -0.1
CBWD3-203ENST00000377344 CTU1Q7Z7A3 348 aaKnown RBP14.44□□□□□ -0.1
CBWD3-203ENST00000377344 AFAP1L1Q8TED9 768 aa14.44□□□□□ -0.1
CBWD3-203ENST00000377344 MTRQ99707 1265 aa14.44□□□□□ -0.1
CBWD3-203ENST00000377344 SH2D3AQ9BRG2 576 aa14.44□□□□□ -0.1
CBWD3-203ENST00000377344 XPNPEP3Q9NQH7 507 aa14.44□□□□□ -0.1
CBWD3-203ENST00000377344 EMSYQ7Z589 1322 aa14.44□□□□□ -0.1
CBWD3-203ENST00000377344 A6NJR5 290 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 LGR5O75473 907 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 OATP04181 439 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 KRT18P05783 430 aaKnown RBP14.43□□□□□ -0.1
CBWD3-203ENST00000377344 CHMP4BP1P59074 171 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 MDM2Q00987 491 aaPredicted RBP14.43□□□□□ -0.1
CBWD3-203ENST00000377344 FSCN1Q16658 493 aaKnown RBP14.43□□□□□ -0.1
CBWD3-203ENST00000377344 ZSCAN23Q3MJ62 389 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 XKR9Q5GH70 373 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 XKR3Q5GH77 459 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 PLA2G4FQ68DD2 849 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 ANO5Q75V66 913 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 DYMQ7RTS9 669 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 PLPPR4Q7Z2D5 763 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 SH3RF1Q7Z6J0 888 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 GPBP1Q86WP2 473 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 SYT2Q8N9I0 419 aaPredicted RBP14.43□□□□□ -0.1
CBWD3-203ENST00000377344 LRRC27Q9C0I9 530 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 DDX20Q9UHI6 824 aaKnown RBP14.43□□□□□ -0.1
CBWD3-203ENST00000377344 ZNF215Q9UL58 517 aaPredicted RBP14.43□□□□□ -0.1
CBWD3-203ENST00000377344 SYNRGQ9UMZ2 1314 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 SYCE3A1L190 88 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 GTPBP6O43824 516 aaPredicted RBP14.43□□□□□ -0.1
CBWD3-203ENST00000377344 LETM1O95202 739 aaPredicted RBP14.43□□□□□ -0.1
CBWD3-203ENST00000377344 MYL3P08590 195 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 ATP4AP20648 1035 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 SLC12A3P55017 1021 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 NPEPPSP55786 919 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 RAD51AP2Q09MP3 1159 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 CUL4BQ13620 913 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 GNASQ5JWF2 1037 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 ELOA2Q8IYF1 753 aaPredicted RBP14.43□□□□□ -0.1
CBWD3-203ENST00000377344 CEP170P1Q96L14 293 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 NRBP2Q9NSY0 501 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 BMP2KQ9NSY1 1161 aaPredicted RBP14.43□□□□□ -0.1
CBWD3-203ENST00000377344 ERAP1Q9NZ08 941 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 DBR1Q9UK59 544 aaKnown RBP14.43□□□□□ -0.1
CBWD3-203ENST00000377344 TRPC6Q9Y210 931 aa14.43□□□□□ -0.1
CBWD3-203ENST00000377344 MYH9P35579 1960 aaKnown RBP14.42□□□□□ -0.1
CBWD3-203ENST00000377344 WDR81Q562E7 1941 aa14.42□□□□□ -0.1
CBWD3-203ENST00000377344 MYMKA6NI61 221 aa14.42□□□□□ -0.1
CBWD3-203ENST00000377344 SMC2O95347 1197 aa14.42□□□□□ -0.1
CBWD3-203ENST00000377344 XRCC6P12956 609 aaKnown RBP eCLIP14.42□□□□□ -0.1
CBWD3-203ENST00000377344 GJA9P57773 515 aa14.42□□□□□ -0.1
CBWD3-203ENST00000377344 ASIC1P78348 528 aa14.42□□□□□ -0.1
CBWD3-203ENST00000377344 MTERF2Q49AM1 385 aa14.42□□□□□ -0.1
CBWD3-203ENST00000377344 DDX12PQ92771 950 aa14.42□□□□□ -0.1
CBWD3-203ENST00000377344 SMARCE1Q969G3 411 aa14.42□□□□□ -0.1
CBWD3-203ENST00000377344 FAM167AQ96KS9 214 aa14.42□□□□□ -0.1
CBWD3-203ENST00000377344 ANKEF1Q9NU02 776 aa14.42□□□□□ -0.1
CBWD3-203ENST00000377344 KIAA1468Q9P260 1216 aa14.42□□□□□ -0.1
CBWD3-203ENST00000377344 PCDHA5Q9Y5H7 936 aa14.42□□□□□ -0.1
CBWD3-203ENST00000377344 NPHP3-ACAD11A0A0J9YXS1 232 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 MYADML2A6NDP7 307 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms