RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 PTGISQ16647 500 aa16.9■□□□□ 0.3
FXN-201ENST00000377270 RRAGBQ5VZM2 374 aa16.9■□□□□ 0.3
FXN-201ENST00000377270 USP17L2Q6R6M4 530 aa16.9■□□□□ 0.3
FXN-201ENST00000377270 CXorf38Q8TB03 319 aa16.9■□□□□ 0.3
FXN-201ENST00000377270 AGAP11Q8TF27 550 aa16.9■□□□□ 0.3
FXN-201ENST00000377270 CAPZA3Q96KX2 299 aa16.9■□□□□ 0.3
FXN-201ENST00000377270 ITM2BQ9Y287 266 aa16.9■□□□□ 0.3
FXN-201ENST00000377270 RIMBP2O15034 1052 aa16.89■□□□□ 0.29
FXN-201ENST00000377270 GTF2IP78347 998 aa16.89■□□□□ 0.29
FXN-201ENST00000377270 DAGLBQ8NCG7 672 aa16.89■□□□□ 0.29
FXN-201ENST00000377270 TMEM60Q9H2L4 133 aa16.89■□□□□ 0.29
FXN-201ENST00000377270 VAT1LQ9HCJ6 419 aa16.89■□□□□ 0.29
FXN-201ENST00000377270 TRIM10Q9UDY6 481 aa16.89■□□□□ 0.29
FXN-201ENST00000377270 CTNND2Q9UQB3 1225 aa16.89■□□□□ 0.29
FXN-201ENST00000377270 STAT6P42226 847 aa16.89■□□□□ 0.29
FXN-201ENST00000377270 TRPC1P48995 793 aa16.89■□□□□ 0.29
FXN-201ENST00000377270 ADAM9Q13443 819 aa16.89■□□□□ 0.29
FXN-201ENST00000377270 PPP1R7Q15435 360 aa16.89■□□□□ 0.29
FXN-201ENST00000377270 PUS10Q3MIT2 529 aaKnown RBP16.89■□□□□ 0.29
FXN-201ENST00000377270 TTMPQ5BVD1 217 aa16.89■□□□□ 0.29
FXN-201ENST00000377270 SLC27A3Q5K4L6 730 aa16.89■□□□□ 0.29
FXN-201ENST00000377270 TAF4BQ92750 862 aa16.89■□□□□ 0.29
FXN-201ENST00000377270 ARL8AQ96BM9 186 aa16.89■□□□□ 0.29
FXN-201ENST00000377270 CEP95Q96GE4 821 aa16.89■□□□□ 0.29
FXN-201ENST00000377270 CRAMP1Q96RY5 1269 aa16.89■□□□□ 0.29
FXN-201ENST00000377270 HAUS4Q9H6D7 363 aa16.89■□□□□ 0.29
FXN-201ENST00000377270 TRPV5Q9NQA5 729 aa16.89■□□□□ 0.29
FXN-201ENST00000377270 BARX2Q9UMQ3 279 aaPredicted RBP16.89■□□□□ 0.29
FXN-201ENST00000377270 POLRMTO00411 1230 aaKnown RBP16.88■□□□□ 0.29
FXN-201ENST00000377270 DNAJC8O75937 253 aaPredicted RBP16.88■□□□□ 0.29
FXN-201ENST00000377270 NAT2P11245 290 aa16.88■□□□□ 0.29
FXN-201ENST00000377270 NAPAP54920 295 aa16.88■□□□□ 0.29
FXN-201ENST00000377270 CDKAL1Q5VV42 579 aa16.88■□□□□ 0.29
FXN-201ENST00000377270 CCDC70Q6NSX1 233 aa16.88■□□□□ 0.29
FXN-201ENST00000377270 NDNQ99608 321 aa16.88■□□□□ 0.29
FXN-201ENST00000377270 UBR3Q6ZT12 1888 aa16.88■□□□□ 0.29
FXN-201ENST00000377270 SNED1Q8TER0 1413 aa16.88■□□□□ 0.29
FXN-201ENST00000377270 PP2D1A8MPX8 630 aa16.88■□□□□ 0.29
FXN-201ENST00000377270 EIF3FO00303 357 aaPredicted RBP16.88■□□□□ 0.29
FXN-201ENST00000377270 TRIM37O94972 964 aa16.88■□□□□ 0.29
FXN-201ENST00000377270 FAM200BP0CF97 657 aa16.88■□□□□ 0.29
FXN-201ENST00000377270 TEX9Q8N6V9 391 aa16.88■□□□□ 0.29
FXN-201ENST00000377270 ZBTB8BQ8NAP8 495 aaPredicted RBP16.88■□□□□ 0.29
FXN-201ENST00000377270 CAGE1Q8TC20 777 aa16.88■□□□□ 0.29
FXN-201ENST00000377270 RRP36Q96EU6 259 aaKnown RBP16.88■□□□□ 0.29
FXN-201ENST00000377270 SPZ1Q9BXG8 430 aa16.88■□□□□ 0.29
FXN-201ENST00000377270 GAKO14976 1311 aa16.88■□□□□ 0.29
FXN-201ENST00000377270 FAM107AO95990 144 aa16.87■□□□□ 0.29
FXN-201ENST00000377270 PENKP01210 267 aaPredicted RBP16.87■□□□□ 0.29
FXN-201ENST00000377270 ALS2CLQ60I27 953 aa16.87■□□□□ 0.29
FXN-201ENST00000377270 IQCEQ6IPM2 695 aa16.87■□□□□ 0.29
FXN-201ENST00000377270 MYOCDQ8IZQ8 938 aa16.87■□□□□ 0.29
FXN-201ENST00000377270 SAMD3Q8N6K7 520 aa16.87■□□□□ 0.29
FXN-201ENST00000377270 CCDC155Q8N6L0 562 aa16.87■□□□□ 0.29
FXN-201ENST00000377270 CTNNBL1Q8WYA6 563 aaPredicted RBP16.87■□□□□ 0.29
FXN-201ENST00000377270 JAKMIP2Q96AA8 810 aa16.87■□□□□ 0.29
FXN-201ENST00000377270 RNPC3Q96LT9 517 aaKnown RBP16.87■□□□□ 0.29
FXN-201ENST00000377270 POLR3CQ9BUI4 534 aaPredicted RBP16.87■□□□□ 0.29
FXN-201ENST00000377270 LNPEPQ9UIQ6 1025 aa16.87■□□□□ 0.29
FXN-201ENST00000377270 PAIP2BQ9ULR5 123 aaKnown RBP16.87■□□□□ 0.29
FXN-201ENST00000377270 REXO2Q9Y3B8 237 aaKnown RBP16.87■□□□□ 0.29
FXN-201ENST00000377270 PPP1R37O75864 691 aa16.87■□□□□ 0.29
FXN-201ENST00000377270 RPN1P04843 607 aaKnown RBP16.87■□□□□ 0.29
FXN-201ENST00000377270 PICALMQ13492 652 aa16.87■□□□□ 0.29
FXN-201ENST00000377270 SH2D3CQ8N5H7 860 aa16.87■□□□□ 0.29
FXN-201ENST00000377270 HDAC7Q8WUI4 952 aa16.87■□□□□ 0.29
FXN-201ENST00000377270 NUP88Q99567 741 aaPredicted RBP16.87■□□□□ 0.29
FXN-201ENST00000377270 DISC1Q9NRI5 854 aa16.87■□□□□ 0.29
FXN-201ENST00000377270 SWAP70Q9UH65 585 aa16.87■□□□□ 0.29
FXN-201ENST00000377270 GMEB1Q9Y692 573 aa16.87■□□□□ 0.29
FXN-201ENST00000377270 EPN1Q9Y6I3 576 aaPredicted RBP16.87■□□□□ 0.29
FXN-201ENST00000377270 SMCO2A6NFE2 343 aa16.86■□□□□ 0.29
FXN-201ENST00000377270 F8W031 263 aaPredicted RBP16.86■□□□□ 0.29
FXN-201ENST00000377270 PPEF1O14829 653 aaPredicted RBP16.86■□□□□ 0.29
FXN-201ENST00000377270 NDUFA10O95299 355 aa16.86■□□□□ 0.29
FXN-201ENST00000377270 UBA7P41226 1012 aa16.86■□□□□ 0.29
FXN-201ENST00000377270 HDAC4P56524 1084 aa16.86■□□□□ 0.29
FXN-201ENST00000377270 SMUG1Q53HV7 270 aa16.86■□□□□ 0.29
FXN-201ENST00000377270 NCCRP1Q6ZVX7 275 aaPredicted RBP16.86■□□□□ 0.29
FXN-201ENST00000377270 APLFQ8IW19 511 aaPredicted RBP16.86■□□□□ 0.29
FXN-201ENST00000377270 CCDC65Q8IXS2 484 aa16.86■□□□□ 0.29
FXN-201ENST00000377270 CYFIP2Q96F07 1278 aa16.86■□□□□ 0.29
FXN-201ENST00000377270 PLIN2Q99541 437 aa16.86■□□□□ 0.29
FXN-201ENST00000377270 OXCT2Q9BYC2 517 aaPredicted RBP16.86■□□□□ 0.29
FXN-201ENST00000377270 ZMYND12Q9H0C1 365 aa16.86■□□□□ 0.29
FXN-201ENST00000377270 QTRT2Q9H974 415 aaKnown RBP16.86■□□□□ 0.29
FXN-201ENST00000377270 ZNHIT6Q9NWK9 470 aaKnown RBP16.86■□□□□ 0.29
FXN-201ENST00000377270 RMND1Q9NWS8 449 aa16.86■□□□□ 0.29
FXN-201ENST00000377270 DAGLAQ9Y4D2 1042 aa16.86■□□□□ 0.29
FXN-201ENST00000377270 PFDN1O60925 122 aa16.86■□□□□ 0.29
FXN-201ENST00000377270 PSMC4P43686 418 aa16.86■□□□□ 0.29
FXN-201ENST00000377270 CLCN2P51788 898 aa16.86■□□□□ 0.29
FXN-201ENST00000377270 RIPK1Q13546 671 aa16.86■□□□□ 0.29
FXN-201ENST00000377270 LACTB2Q53H82 288 aaPredicted RBP16.86■□□□□ 0.29
FXN-201ENST00000377270 PNMA8AQ86V59 439 aaPredicted RBP16.86■□□□□ 0.29
FXN-201ENST00000377270 SP8Q8IXZ3 490 aa16.86■□□□□ 0.29
FXN-201ENST00000377270 SLC15A3Q8IY34 581 aa16.86■□□□□ 0.29
FXN-201ENST00000377270 GBP7Q8N8V2 638 aaPredicted RBP16.86■□□□□ 0.29
FXN-201ENST00000377270 RUBCNQ92622 972 aa16.86■□□□□ 0.29
FXN-201ENST00000377270 SEC63Q9UGP8 760 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms