RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 MTG1Q9BT17 334 aaPredicted RBP13.88□□□□□ -0.19
VRK3-202ENST00000377011 GTPBP4Q9BZE4 634 aaKnown RBP13.88□□□□□ -0.19
VRK3-202ENST00000377011 TMEM39AQ9NV64 488 aa13.88□□□□□ -0.19
VRK3-202ENST00000377011 SCN5AQ14524 2016 aa13.88□□□□□ -0.19
VRK3-202ENST00000377011 COL6A3P12111 3177 aa13.88□□□□□ -0.19
VRK3-202ENST00000377011 HOXD8P13378 290 aaPredicted RBP13.87□□□□□ -0.19
VRK3-202ENST00000377011 CYP2C18P33260 490 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 SYKP43405 635 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 FXR1P51114 621 aaKnown RBP eCLIP13.87□□□□□ -0.19
VRK3-202ENST00000377011 CACNB1Q02641 598 aaPredicted RBP13.87□□□□□ -0.19
VRK3-202ENST00000377011 SSRP1Q08945 709 aaKnown RBP13.87□□□□□ -0.19
VRK3-202ENST00000377011 PTPN14Q15678 1187 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 DPCR1Q3MIW9 517 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 RESP18Q5W5W9 173 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 PPTC7Q8NI37 304 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 WNT8BQ93098 351 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 C16orf70Q9BSU1 422 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 ESYT2A0FGR8 921 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 M0R2N6 131 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 CCP110O43303 1012 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 CBFA2T2O43439 604 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 ZEB2O60315 1214 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 SREBF1P36956 1147 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 ITGB3BPQ13352 177 aaPredicted RBP13.87□□□□□ -0.19
VRK3-202ENST00000377011 LAMC2Q13753 1193 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 GDF6Q6KF10 455 aaPredicted RBP13.87□□□□□ -0.19
VRK3-202ENST00000377011 C16orf59Q7L2K0 433 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 CCAR2Q8N163 923 aaKnown RBP13.87□□□□□ -0.19
VRK3-202ENST00000377011 GJA10Q969M2 543 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 LRCH3Q96II8 777 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 GPR20Q99678 358 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 WNT8AQ9H1J5 351 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 JADE2Q9NQC1 790 aa13.87□□□□□ -0.19
VRK3-202ENST00000377011 HOOK1Q9UJC3 728 aaKnown RBP13.87□□□□□ -0.19
VRK3-202ENST00000377011 DCDC2CA8MYV0 355 aa13.86□□□□□ -0.19
VRK3-202ENST00000377011 hCG_1984214I3L0E3 225 aa13.86□□□□□ -0.19
VRK3-202ENST00000377011 CABYRO75952 493 aa13.86□□□□□ -0.19
VRK3-202ENST00000377011 ARHGAP4P98171 946 aa13.86□□□□□ -0.19
VRK3-202ENST00000377011 GNL2Q13823 731 aaKnown RBP13.86□□□□□ -0.19
VRK3-202ENST00000377011 NCAPHQ15003 741 aa13.86□□□□□ -0.19
VRK3-202ENST00000377011 FAM47CQ5HY64 1035 aa13.86□□□□□ -0.19
VRK3-202ENST00000377011 EARS2Q5JPH6 523 aaKnown RBP13.86□□□□□ -0.19
VRK3-202ENST00000377011 ZNF713Q8N859 430 aaPredicted RBP13.86□□□□□ -0.19
VRK3-202ENST00000377011 OXER1Q8TDS5 423 aa13.86□□□□□ -0.19
VRK3-202ENST00000377011 MXRA8Q9BRK3 442 aa13.86□□□□□ -0.19
VRK3-202ENST00000377011 UBE2OQ9C0C9 1292 aaKnown RBP13.86□□□□□ -0.19
VRK3-202ENST00000377011 MLXIPQ9HAP2 919 aa13.86□□□□□ -0.19
VRK3-202ENST00000377011 KCNH7Q9NS40 1196 aa13.86□□□□□ -0.19
VRK3-202ENST00000377011 HDAC6Q9UBN7 1215 aa13.86□□□□□ -0.19
VRK3-202ENST00000377011 TET1Q8NFU7 2136 aa13.85□□□□□ -0.19
VRK3-202ENST00000377011 CHD7Q9P2D1 2997 aa13.85□□□□□ -0.19
VRK3-202ENST00000377011 IGLV3-22A0A075B6J6 115 aa13.85□□□□□ -0.19
VRK3-202ENST00000377011 GSTTP1A0A1W2PQM5 241 aa13.85□□□□□ -0.19
VRK3-202ENST00000377011 FAM205CA6NFA0 338 aa13.85□□□□□ -0.19
VRK3-202ENST00000377011 HAS3O00219 553 aa13.85□□□□□ -0.19
VRK3-202ENST00000377011 F2P00734 622 aa13.85□□□□□ -0.19
VRK3-202ENST00000377011 TGFB3P10600 412 aa13.85□□□□□ -0.19
VRK3-202ENST00000377011 BMP8BP34820 402 aa13.85□□□□□ -0.19
VRK3-202ENST00000377011 PSEN2P49810 448 aa13.85□□□□□ -0.19
VRK3-202ENST00000377011 CCL23P55773 120 aa13.85□□□□□ -0.19
VRK3-202ENST00000377011 AKAP17AQ02040 695 aaKnown RBP13.85□□□□□ -0.19
VRK3-202ENST00000377011 DMTNQ08495 405 aa13.85□□□□□ -0.19
VRK3-202ENST00000377011 MTMR1Q13613 665 aa13.85□□□□□ -0.19
VRK3-202ENST00000377011 SAFBQ15424 915 aaKnown RBP eCLIP13.85□□□□□ -0.19
VRK3-202ENST00000377011 SHHQ15465 462 aa13.85□□□□□ -0.19
VRK3-202ENST00000377011 DGKDQ16760 1214 aa13.85□□□□□ -0.19
VRK3-202ENST00000377011 GNPTABQ3T906 1256 aa13.85□□□□□ -0.19
VRK3-202ENST00000377011 METTL7BQ6UX53 244 aa13.85□□□□□ -0.19
VRK3-202ENST00000377011 FILIP1Q7Z7B0 1213 aa13.85□□□□□ -0.19
VRK3-202ENST00000377011 DHX38Q92620 1227 aaKnown RBP13.85□□□□□ -0.19
VRK3-202ENST00000377011 GPRASP2Q96D09 838 aa13.85□□□□□ -0.19
VRK3-202ENST00000377011 CGNQ9P2M7 1197 aaKnown RBP13.85□□□□□ -0.19
VRK3-202ENST00000377011 PRDM4Q9UKN5 801 aa13.85□□□□□ -0.19
VRK3-202ENST00000377011 MEIS1O00470 390 aa13.84□□□□□ -0.19
VRK3-202ENST00000377011 DEXIO95424 95 aa13.84□□□□□ -0.19
VRK3-202ENST00000377011 TIMP1P01033 207 aa13.84□□□□□ -0.19
VRK3-202ENST00000377011 LGALS2P05162 132 aa13.84□□□□□ -0.19
VRK3-202ENST00000377011 ACRP10323 421 aa13.84□□□□□ -0.19
VRK3-202ENST00000377011 CSF2RAP15509 400 aa13.84□□□□□ -0.19
VRK3-202ENST00000377011 RAG1P15918 1043 aa13.84□□□□□ -0.19
VRK3-202ENST00000377011 NCBP1Q09161 790 aaKnown RBP13.84□□□□□ -0.19
VRK3-202ENST00000377011 AP3B2Q13367 1082 aa13.84□□□□□ -0.19
VRK3-202ENST00000377011 KIAA0753Q2KHM9 967 aa13.84□□□□□ -0.19
VRK3-202ENST00000377011 TRIM22Q8IYM9 498 aa13.84□□□□□ -0.19
VRK3-202ENST00000377011 REXO1Q8N1G1 1221 aaKnown RBP13.84□□□□□ -0.19
VRK3-202ENST00000377011 LENG9Q96B70 501 aa13.84□□□□□ -0.19
VRK3-202ENST00000377011 ZBTB10Q96DT7 871 aa13.84□□□□□ -0.19
VRK3-202ENST00000377011 SCLYQ96I15 445 aa13.84□□□□□ -0.19
VRK3-202ENST00000377011 PCYT2Q99447 389 aa13.84□□□□□ -0.19
VRK3-202ENST00000377011 NOC4LQ9BVI4 516 aaKnown RBP13.84□□□□□ -0.19
VRK3-202ENST00000377011 XPO4Q9C0E2 1151 aaKnown RBP13.84□□□□□ -0.19
VRK3-202ENST00000377011 FOXP1Q9H334 677 aaPredicted RBP13.84□□□□□ -0.19
VRK3-202ENST00000377011 C6orf50Q9HD87 102 aa13.84□□□□□ -0.19
VRK3-202ENST00000377011 STAM2O75886 525 aa13.84□□□□□ -0.19
VRK3-202ENST00000377011 SFPQP23246 707 aaKnown RBP eCLIP13.84□□□□□ -0.19
VRK3-202ENST00000377011 NLRP5P59047 1200 aa13.84□□□□□ -0.19
VRK3-202ENST00000377011 MYL5Q02045 173 aa13.84□□□□□ -0.19
VRK3-202ENST00000377011 MFSD10Q14728 455 aa13.84□□□□□ -0.19
VRK3-202ENST00000377011 CEP55Q53EZ4 464 aa13.84□□□□□ -0.19
VRK3-202ENST00000377011 XRRA1Q6P2D8 792 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms