RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 CTAGE3PQ8IX95 158 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 KATNAL1Q9BW62 490 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 CNOT10Q9H9A5 744 aaKnown RBP11.86□□□□□ -0.51
MDC1-201ENST00000376406 PFDN4Q9NQP4 134 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 STK38LQ9Y2H1 464 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 MEIS1O00470 390 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 GDF11O95390 407 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 CPSF3Q9UKF6 684 aaKnown RBP11.86□□□□□ -0.51
MDC1-201ENST00000376406 AXIN2Q9Y2T1 843 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 GFPT2O94808 682 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 CDC25AP30304 524 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 SLC8A1P32418 973 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 CUL1Q13616 776 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 TKFCQ3LXA3 575 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 NSUN6Q8TEA1 469 aaKnown RBP11.86□□□□□ -0.51
MDC1-201ENST00000376406 ZNF148Q9UQR1 794 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 USP17L15C9J2P7 530 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 USP17L13C9JLJ4 530 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 USP17L11C9JVI0 530 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 USP17L18D6R9N7 530 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 USP17L22D6RA61 530 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 USP17L17D6RBQ6 530 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 USP17L19D6RCP7 530 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 USP17L20D6RJB6 530 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 UBXN2AP68543 259 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 IRX4P78413 519 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 USP17L24Q0WX57 530 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 SNAPC2Q13487 334 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 ENAHQ8N8S7 591 aaPredicted RBP11.86□□□□□ -0.51
MDC1-201ENST00000376406 MMP19Q99542 508 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 ANO3Q9BYT9 981 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 UBE2TQ9NPD8 197 aaPredicted RBP11.86□□□□□ -0.51
MDC1-201ENST00000376406 ECEL1O95672 775 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 SRGAP2BP0DMP2 458 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 GRM4Q14833 912 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 SLFNL1Q499Z3 407 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 ZBED2Q9BTP6 218 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 RPF1Q9H9Y2 349 aaKnown RBP11.86□□□□□ -0.51
MDC1-201ENST00000376406 CEP72Q9P209 647 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 LGALS16A8MUM7 142 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 IL9RQ01113 521 aa11.86□□□□□ -0.51
MDC1-201ENST00000376406 GLE1Q53GS7 698 aaKnown RBP11.86□□□□□ -0.51
MDC1-201ENST00000376406 GH2P01242 217 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 PPP2R5DQ14738 602 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 DIXDC1Q155Q3 683 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 EFCAB13Q8IY85 973 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 PRPF38AQ8NAV1 312 aaKnown RBP11.85□□□□□ -0.51
MDC1-201ENST00000376406 RAET1EQ8TD07 263 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 PARK7Q99497 189 aaKnown RBP11.85□□□□□ -0.51
MDC1-201ENST00000376406 TRIM62Q9BVG3 475 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 MRPL47Q9HD33 250 aaKnown RBP11.85□□□□□ -0.51
MDC1-201ENST00000376406 SGK1O00141 431 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 ZNF189O75820 626 aaPredicted RBP11.85□□□□□ -0.51
MDC1-201ENST00000376406 KRT76Q01546 638 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 RABL6Q3YEC7 729 aaPredicted RBP11.85□□□□□ -0.51
MDC1-201ENST00000376406 TBC1D10BQ4KMP7 808 aaPredicted RBP11.85□□□□□ -0.51
MDC1-201ENST00000376406 SGO2Q562F6 1265 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 MAP3K21Q5TCX8 1036 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 NAA35Q5VZE5 725 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 KCTD16Q68DU8 428 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 LRRC8CQ8TDW0 803 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 FAN1Q9Y2M0 1017 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 A6NJR5 290 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 SLC26A4O43511 780 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 CXCR5P32302 372 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 PHKA2P46019 1235 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 WDR70Q9NW82 654 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 RAD54LQ92698 747 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 PDLIM2Q96JY6 352 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 BAIAP2L1Q9UHR4 511 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 FTCDO95954 541 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 CDC27P30260 824 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 GARSP41250 739 aaKnown RBP11.85□□□□□ -0.51
MDC1-201ENST00000376406 INTS9Q9NV88 658 aaKnown RBP11.85□□□□□ -0.51
MDC1-201ENST00000376406 PNPLA7Q6ZV29 1317 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 SUN1O94901 812 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 VPS41P49754 854 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 SGMS1Q86VZ5 419 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 CCDC197Q8NCU1 140 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 ZFYVE28Q9HCC9 887 aa11.85□□□□□ -0.51
MDC1-201ENST00000376406 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.85□□□□□ -0.51
MDC1-201ENST00000376406 ZBTB5O15062 677 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 LRRN2O75325 713 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 ABL1P00519 1130 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 TGFB2P61812 414 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 SLMAPQ14BN4 828 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 FAM20AQ96MK3 541 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.84□□□□□ -0.51
MDC1-201ENST00000376406 K7ERI5 159 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 ZMYND10O75800 440 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 CCT5P48643 541 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 NFIXQ14938 502 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 TTC19Q6DKK2 380 aaPredicted RBP11.84□□□□□ -0.51
MDC1-201ENST00000376406 TTBK2Q6IQ55 1244 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 RSRC2Q7L4I2 434 aaKnown RBP11.84□□□□□ -0.51
MDC1-201ENST00000376406 TECPR2O15040 1411 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 XPAP23025 273 aaPredicted RBP11.84□□□□□ -0.51
MDC1-201ENST00000376406 CASP8Q14790 479 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 SNCBQ16143 134 aa11.84□□□□□ -0.51
MDC1-201ENST00000376406 MIGA2Q7L4E1 593 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms