RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 FAM196BA6NMK8 535 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 WDR64B1ANS9 1081 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 ELF1P32519 619 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 UBE3CQ15386 1083 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 SCN4BQ8IWT1 228 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 KCNV2Q8TDN2 545 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 DYDC2Q96IM9 177 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 PPP1R36Q96LQ0 422 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 MRPL47Q9HD33 250 aaKnown RBP14.73□□□□□ -0.05
COL4A1-201ENST00000375820 TBX22Q9Y458 520 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 FGGP02679 453 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 ERFP50548 548 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 GPATCH4Q5T3I0 446 aaKnown RBP14.73□□□□□ -0.05
COL4A1-201ENST00000375820 TRIM49BA6NDI0 452 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 ATP1A3P13637 1013 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 SYCP2LQ5T4T6 812 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 NUGGCQ68CJ6 796 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 ERICH1Q86X53 443 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 AGR3Q8TD06 166 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 ZBED2Q9BTP6 218 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 POLR3CQ9BUI4 534 aaPredicted RBP14.73□□□□□ -0.05
COL4A1-201ENST00000375820 EDEM3Q9BZQ6 932 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 QTRT2Q9H974 415 aaKnown RBP14.73□□□□□ -0.05
COL4A1-201ENST00000375820 ABCB6Q9NP58 842 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 ZNF500O60304 480 aaPredicted RBP14.73□□□□□ -0.05
COL4A1-201ENST00000375820 SERPING1P05155 500 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 ADD2P35612 726 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 MAP4K1Q92918 833 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 FMO2Q99518 471 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 KCNA4P22459 653 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 TBCCQ15814 346 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 DCAF4L1Q3SXM0 396 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 HIBCHQ6NVY1 386 aaPredicted RBP14.73□□□□□ -0.05
COL4A1-201ENST00000375820 TMEM206Q9H813 350 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 ADAMTS1Q9UHI8 967 aa14.73□□□□□ -0.05
COL4A1-201ENST00000375820 SEMA3EO15041 775 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 PSAPP07602 524 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 KRT10P13645 584 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 DAB2P98082 770 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 MECOMQ03112 1051 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 OSBP2Q969R2 916 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 ADD3Q9UEY8 706 aaKnown RBP14.72□□□□□ -0.05
COL4A1-201ENST00000375820 PLAAQ9Y263 795 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 GOLGA8QA0A0J9YX86 632 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 GOLGA8OA6NCC3 632 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 GOLGA8NF8WBI6 632 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 FKBP3Q00688 224 aaKnown RBP14.72□□□□□ -0.05
COL4A1-201ENST00000375820 BHMT2Q9H2M3 363 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 RNF135Q8IUD6 432 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 RNF26Q9BY78 433 aaPredicted RBP14.72□□□□□ -0.05
COL4A1-201ENST00000375820 JRKLQ9Y4A0 524 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 PIK3R2O00459 728 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 NR1D1P20393 614 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 TOGARAM2Q6ZUX3 1019 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 KDELC2Q7Z4H8 507 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 ZNF507Q8TCN5 953 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 SERPINB13Q9UIV8 391 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 RWDD2AQ9UIY3 292 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 ANP32DO95626 131 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 TMPRSS15P98073 1019 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 TRIM42Q8IWZ5 723 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 CEP70Q8NHQ1 597 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 GCNAQ96QF7 691 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 EFHD1Q9BUP0 239 aa14.72□□□□□ -0.05
COL4A1-201ENST00000375820 E2F6O75461 281 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 TADA3O75528 432 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 DNAJC8O75937 253 aaPredicted RBP14.71□□□□□ -0.05
COL4A1-201ENST00000375820 NDUFA10O95299 355 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 USP14P54578 494 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 KLC3Q6P597 504 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 WDR11Q9BZH6 1224 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 PPARGC1AQ9UBK2 798 aaKnown RBP14.71□□□□□ -0.05
COL4A1-201ENST00000375820 SNX24Q9Y343 169 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 LAD1O00515 517 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 SH2B2O14492 632 aaPredicted RBP14.71□□□□□ -0.05
COL4A1-201ENST00000375820 PALMO75781 387 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 CYP2D6P10635 497 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 DRP2Q13474 957 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 MXD4Q14582 209 aaPredicted RBP14.71□□□□□ -0.05
COL4A1-201ENST00000375820 MYCBPQ99417 103 aaPredicted RBP14.71□□□□□ -0.05
COL4A1-201ENST00000375820 PNMA2Q9UL42 364 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 POU5F1BQ06416 359 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 SEPT8Q92599 483 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 ATXN7L3BQ96GX2 97 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 TRPV6Q9H1D0 765 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 VPS11Q9H270 941 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 VCPP55072 806 aaKnown RBP14.71□□□□□ -0.05
COL4A1-201ENST00000375820 APBA1Q02410 837 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 CACNB2Q08289 660 aaPredicted RBP14.71□□□□□ -0.05
COL4A1-201ENST00000375820 HSP90AA5PQ58FG0 334 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 N4BP2L2Q92802 583 aaPredicted RBP14.71□□□□□ -0.05
COL4A1-201ENST00000375820 DRC3Q9H069 523 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 KLHL8Q9P2G9 620 aaPredicted RBP14.71□□□□□ -0.05
COL4A1-201ENST00000375820 SCOCQ9UIL1 159 aa14.71□□□□□ -0.05
COL4A1-201ENST00000375820 MYL1P05976 194 aa14.71□□□□□ -0.06
COL4A1-201ENST00000375820 CDC25BP30305 580 aa14.71□□□□□ -0.06
COL4A1-201ENST00000375820 ZNF211Q13398 564 aaPredicted RBP14.71□□□□□ -0.06
COL4A1-201ENST00000375820 RGS9BPQ6ZS82 235 aa14.71□□□□□ -0.06
COL4A1-201ENST00000375820 NEK9Q8TD19 979 aa14.71□□□□□ -0.06
COL4A1-201ENST00000375820 CCDC124Q96CT7 223 aaKnown RBP14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms