RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 CLEC10AQ8IUN9 316 aa15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 LRRC47Q8N1G4 583 aaKnown RBP15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 CABS1Q96KC9 395 aa15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 SGIP1Q9BQI5 828 aa15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 RTFDC1Q9BY42 306 aaPredicted RBP15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 GANQ9H2C0 597 aa15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 ZHX3Q9H4I2 956 aa15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 GPCPD1Q9NPB8 672 aa15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 ZNF277Q9NRM2 450 aaPredicted RBP15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 AIPL1Q9NZN9 384 aa15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 PCDHAC2Q9Y5I4 1007 aa15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 NFS1Q9Y697 457 aa15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 FAM170AA1A519 330 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 GOLGA6L10A6NI86 522 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 GCOM1H8Y6P7 765 aaPredicted RBP15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 KIF4AO95239 1232 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 MYZAPP0CAP1 466 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 BTDP43251 543 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 PPP4CP60510 307 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 KCNH2Q12809 1159 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 ADAM9Q13443 819 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 C16orf86Q6ZW13 317 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 SPATS2Q86XZ4 545 aaKnown RBP15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 SCFD1Q8WVM8 642 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 RIOX1Q9H6W3 641 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 CD248Q9HCU0 757 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 PLCB1Q9NQ66 1216 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 KIAA1024Q9UPX6 916 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 ATXN2Q99700 1313 aaKnown RBP15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 ESYT2A0FGR8 921 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 PDHBP11177 359 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 ITGA4P13612 1032 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 EPS15P42566 896 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 PTGER2P43116 358 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 ZNF844Q08AG5 666 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 ORC2Q13416 577 aaPredicted RBP15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 IRF2BP2Q7Z5L9 587 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 SCFD2Q8WU76 684 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 LRRC4CQ9HCJ2 640 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 DDX25Q9UHL0 483 aaKnown RBP15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 PCDHA2Q9Y5H9 948 aa15.44■□□□□ 0.06
CLCNKA-202ENST00000375692 SART1O43290 800 aaKnown RBP15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 PPIP5K2O43314 1243 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 CTNNA1P35221 906 aaKnown RBP15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 QPCTQ16769 361 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 ARHGAP27Q6ZUM4 889 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 TEX11Q8IYF3 940 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 CYFIP2Q96F07 1278 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 CEP63Q96MT8 703 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 MYCBPQ99417 103 aaPredicted RBP15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 JPH2Q9BR39 696 aaPredicted RBP15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 PAGR1Q9BTK6 254 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 LRRC27Q9C0I9 530 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 YDJCA8MPS7 323 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 DCDC2CA8MYV0 355 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 USP8P40818 1118 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 USP11P51784 963 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 GSTO1P78417 241 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 SPRED3Q2MJR0 410 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 PPP4R3AQ6IN85 833 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 PODNQ7Z5L7 613 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 CCDC91Q7Z6B0 441 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 KIAA0825Q8IV33 1275 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 CCDC13Q8IYE1 715 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 METTL13Q8N6R0 699 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 TBC1D22AQ8WUA7 517 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 UBLCP1Q8WVY7 318 aaPredicted RBP15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 KCTD10Q9H3F6 313 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 ZNF287Q9HBT7 754 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 EMILIN3Q9NT22 766 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 PIM2Q9P1W9 311 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 CNOT8Q9UFF9 292 aaKnown RBP15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 AMACRQ9UHK6 382 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 FBXL5Q9UKA1 691 aa15.43■□□□□ 0.06
CLCNKA-202ENST00000375692 TMCO5BA8MYB1 307 aa15.42■□□□□ 0.06
CLCNKA-202ENST00000375692 DAPK3O43293 454 aa15.42■□□□□ 0.06
CLCNKA-202ENST00000375692 ACTN3Q08043 901 aaPredicted RBP15.42■□□□□ 0.06
CLCNKA-202ENST00000375692 ODF2Q5BJF6 829 aa15.42■□□□□ 0.06
CLCNKA-202ENST00000375692 YTHDF3Q7Z739 585 aaKnown RBP15.42■□□□□ 0.06
CLCNKA-202ENST00000375692 BMP2KQ9NSY1 1161 aaPredicted RBP15.42■□□□□ 0.06
CLCNKA-202ENST00000375692 PCDHA12Q9UN75 941 aa15.42■□□□□ 0.06
CLCNKA-202ENST00000375692 POTEB3A0JP26 581 aa15.42■□□□□ 0.06
CLCNKA-202ENST00000375692 POTECB2RU33 542 aa15.42■□□□□ 0.06
CLCNKA-202ENST00000375692 PPP1R11O60927 126 aaPredicted RBP15.42■□□□□ 0.06
CLCNKA-202ENST00000375692 PLA2G4BP0C869 781 aa15.42■□□□□ 0.06
CLCNKA-202ENST00000375692 NT5C2P49902 561 aa15.42■□□□□ 0.06
CLCNKA-202ENST00000375692 CASP5P51878 434 aa15.42■□□□□ 0.06
CLCNKA-202ENST00000375692 POTEBQ6S5H4 581 aa15.42■□□□□ 0.06
CLCNKA-202ENST00000375692 C6orf89Q6UWU4 347 aa15.42■□□□□ 0.06
CLCNKA-202ENST00000375692 GPBP1Q86WP2 473 aa15.42■□□□□ 0.06
CLCNKA-202ENST00000375692 LRRC57Q8N9N7 239 aa15.42■□□□□ 0.06
CLCNKA-202ENST00000375692 C1orf131Q8NDD1 294 aaKnown RBP15.42■□□□□ 0.06
CLCNKA-202ENST00000375692 DDX20Q9UHI6 824 aaKnown RBP15.42■□□□□ 0.06
CLCNKA-202ENST00000375692 DAGLAQ9Y4D2 1042 aa15.42■□□□□ 0.06
CLCNKA-202ENST00000375692 GMNCA6NCL1 334 aa15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 CLSTN1O94985 981 aa15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 SPAG5Q96R06 1193 aa15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 CELF4Q9BZC1 486 aaKnown RBP15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 VCPKMTQ9H867 229 aa15.41■□□□□ 0.06
CLCNKA-202ENST00000375692 SLC12A6Q9UHW9 1150 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms