RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 AP3M2P53677 418 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 SNX1Q13596 522 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 SYCP2LQ5T4T6 812 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 ATP11CQ8NB49 1132 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 DDI1Q8WTU0 396 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 POLR3CQ9BUI4 534 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-204ENST00000375290 DLC1Q96QB1 1528 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 H2AFXP16104 143 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-204ENST00000375290 HSPA2P54652 639 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 TMED1Q13445 227 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 NAALADL2Q58DX5 795 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 TTC36A6NLP5 189 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 SGK1O00141 431 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 ACAD11Q709F0 780 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 PYROXD1Q8WU10 500 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 FRMD8P1Q9BZ68 369 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-204ENST00000375290 LIMA1Q9UHB6 759 aaKnown RBP10.93□□□□□ -0.66
PTCH1-204ENST00000375290 USP15Q9Y4E8 981 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-204ENST00000375290 TBXAS1P24557 533 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-204ENST00000375290 LIG4P49917 911 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 PAWRQ96IZ0 340 aaKnown RBP10.93□□□□□ -0.66
PTCH1-204ENST00000375290 ETNK1Q9HBU6 452 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 TARBP1Q13395 1621 aaKnown RBP10.93□□□□□ -0.66
PTCH1-204ENST00000375290 E2F4Q16254 413 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 GGA1Q9UJY5 639 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 E2F5Q15329 346 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 TGS1Q96RS0 853 aaKnown RBP10.93□□□□□ -0.66
PTCH1-204ENST00000375290 CCT8L2Q96SF2 557 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 SH3BP5O60239 455 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 DDB1Q16531 1140 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 TBC1D1Q86TI0 1168 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-204ENST00000375290 RFFLQ8WZ73 363 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 USP6NLQ92738 828 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 TUBE1Q9UJT0 475 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 CD2BP2O95400 341 aaKnown RBP10.93□□□□□ -0.66
PTCH1-204ENST00000375290 ADD1P35611 737 aaKnown RBP10.93□□□□□ -0.66
PTCH1-204ENST00000375290 PSMD6Q15008 389 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 HPS3Q969F9 1004 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 ZNF653Q96CK0 615 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 RIOK1Q9BRS2 568 aaKnown RBP10.93□□□□□ -0.66
PTCH1-204ENST00000375290 K7ENM7 598 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 SLC16A3O15427 465 aaKnown RBP10.93□□□□□ -0.66
PTCH1-204ENST00000375290 ANXA1P04083 346 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 DDX5P17844 614 aaKnown RBP10.93□□□□□ -0.66
PTCH1-204ENST00000375290 TFDP1Q14186 410 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 RNF207Q6ZRF8 634 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 DEPTORQ8TB45 409 aa10.93□□□□□ -0.66
PTCH1-204ENST00000375290 TECP42680 631 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 SCG3Q8WXD2 468 aaKnown RBP10.92□□□□□ -0.66
PTCH1-204ENST00000375290 GOLPH3LQ9H4A5 285 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 TBC1D7Q9P0N9 293 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 DBNLQ9UJU6 430 aaKnown RBP10.92□□□□□ -0.66
PTCH1-204ENST00000375290 LRRC7Q96NW7 1537 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 ADD2P35612 726 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 HIC1Q14526 733 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 FAM133BQ5BKY9 247 aaKnown RBP10.92□□□□□ -0.66
PTCH1-204ENST00000375290 RSPH3Q86UC2 560 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 NUDCD1Q96RS6 583 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 SNX25Q9H3E2 840 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 ANKFY1Q9P2R3 1169 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 KRT7P08729 469 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 IFNAR2P48551 515 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 CCDC134Q9H6E4 229 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 GLI2P10070 1586 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 USP6P35125 1406 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 COPEO14579 308 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 SMARCA1P28370 1054 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 PDCLQ13371 301 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 KCNK16Q96T55 309 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 TEX12Q9BXU0 123 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 FAM192AQ9GZU8 254 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 SUN2Q9UH99 717 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 POLR2MP0CAP2 368 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 ITIH2P19823 946 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 PICALMQ13492 652 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 TFDP2Q14188 446 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 IQCB1Q15051 598 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 TMED2Q15363 201 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 FBXO31Q5XUX0 539 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-204ENST00000375290 ARMCX5Q6P1M9 558 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 BTNL9Q6UXG8 535 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 SPATA21Q7Z572 469 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 SAMSN1Q9NSI8 373 aaKnown RBP10.92□□□□□ -0.66
PTCH1-204ENST00000375290 CES2O00748 559 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 DDIT3P35638 169 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 RBM43Q6ZSC3 357 aaKnown RBP10.92□□□□□ -0.66
PTCH1-204ENST00000375290 PPM1KQ8N3J5 372 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 ACRBPQ8NEB7 543 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 RPS6KC1Q96S38 1066 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 MMADHCQ9H3L0 296 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-204ENST00000375290 ZFYVE16Q7Z3T8 1539 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 GOLGA8IPA6NC78 632 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 GPC5P78333 572 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 DTX3LQ8TDB6 740 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 ALDH1B1P30837 517 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 CYFIP1Q7L576 1253 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 RPL26L1Q9UNX3 145 aaKnown RBP10.92□□□□□ -0.66
PTCH1-204ENST00000375290 SNX5Q9Y5X3 404 aa10.92□□□□□ -0.66
PTCH1-204ENST00000375290 MAGOHP61326 146 aaKnown RBP10.91□□□□□ -0.66
PTCH1-204ENST00000375290 MORF4L2Q15014 288 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms