RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 TMEM47Q9BQJ4 181 aa13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 SEPT10Q9P0V9 454 aa13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 KDM6AO15550 1401 aaPredicted RBP13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 CAPN9O14815 690 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 MAP3K7O43318 606 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 PNMA6AP0CW24 399 aaPredicted RBP13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 XKR9Q5GH70 373 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 ENAHQ8N8S7 591 aaPredicted RBP13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 CCDC127Q96BQ5 260 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 NSUN4Q96CB9 384 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 EEF2KMTQ96G04 330 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 HESX1Q9UBX0 185 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 SOWAHDA6NJG2 315 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 SGK1O00141 431 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 PFDN6O15212 129 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 MYL1P05976 194 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 SAT1P21673 171 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 ECE1P42892 770 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 INPP1P49441 399 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 EIF3BP55884 814 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 TMED2Q15363 201 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 PDCD2Q16342 344 aaPredicted RBP13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 ZNF658Q5TYW1 1059 aaPredicted RBP13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 NCAPG2Q86XI2 1143 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 ENOX1Q8TC92 643 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 LARP4BQ92615 738 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 AIFM3Q96NN9 605 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 CCDC68Q9H2F9 335 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 A0A087WWV3 80 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 CDC37Q16543 378 aaPredicted RBP13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 SGO2Q562F6 1265 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 SMIM5Q71RC9 77 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 NEK9Q8TD19 979 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 WDR11Q9BZH6 1224 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 MRPL46Q9H2W6 279 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 SLFN14P0C7P3 912 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 NR2F2P24468 414 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 SGMS1Q86VZ5 419 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 PPWD1Q96BP3 646 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 IL17RAQ96F46 866 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 EFHD1Q9BUP0 239 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 MAN1B1Q9UKM7 699 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 APOEP02649 317 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 HNRNPH2P55795 449 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 STX1BP61266 288 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 ARL6IP4Q66PJ3 421 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 TTBK2Q6IQ55 1244 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 PANX2Q96RD6 677 aa13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 TDRD3Q9H7E2 651 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-202ENST00000374747 COL5A2P05997 1499 aaPredicted RBP13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 COBLO75128 1261 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 ADCY1Q08828 1119 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 MIGA2Q7L4E1 593 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 HACE1Q8IYU2 909 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 TRIM56Q9BRZ2 755 aaKnown RBP13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 ABCB6Q9NP58 842 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 STK17AQ9UEE5 414 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 ANAPC5Q9UJX4 755 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 ANGPTL2Q9UKU9 493 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 NOVA2Q9UNW9 492 aaKnown RBP13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 PXDNQ92626 1479 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 GH2P01242 217 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 AFPP02771 609 aaKnown RBP13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 MSH2P43246 934 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 E2F4Q16254 413 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 NME8Q8N427 588 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 NT5C1BQ96P26 610 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 KIAA1024Q9UPX6 916 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 MOCS3O95396 460 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 POLE2P56282 527 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 CCNA1P78396 465 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 ZBED6P86452 979 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 DMP1Q13316 513 aaPredicted RBP13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 PLCB4Q15147 1175 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 TERF2Q15554 542 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 CYP4F22Q6NT55 531 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 FTOQ9C0B1 505 aaKnown RBP eCLIP13.25□□□□□ -0.293e-7■■■□□ 17.7
NPLOC4-202ENST00000374747 ANKFY1Q9P2R3 1169 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 RWDD2AQ9UIY3 292 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 ZNF609O15014 1411 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 ZBTB7AO95365 584 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 CXCR5P32302 372 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 CACNB3P54284 484 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 PFKFB3Q16875 520 aaPredicted RBP13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 EMBQ6PCB8 327 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 SMYD4Q8IYR2 804 aaPredicted RBP13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 ZNF653Q96CK0 615 aa13.25□□□□□ -0.29
NPLOC4-202ENST00000374747 RASGRF2O14827 1237 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 NDUFA10O95299 355 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 TMEM191BP0C7N4 346 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 MAPK4P31152 587 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 MAGEA9P43362 315 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 KCTD2Q14681 263 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 C10orf76Q5T2E6 689 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 CCHCR1Q8TD31 782 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 IPO11Q9UI26 975 aaKnown RBP13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 FTCDO95954 541 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 RFX6Q8HWS3 928 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 MORC4Q8TE76 937 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 MMS19Q96T76 1030 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms