RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 KIF5AQ12840 1032 aa20.12■□□□□ 0.81
RXRB-202ENST00000374685 TNIP1Q15025 636 aa20.12■□□□□ 0.81
RXRB-202ENST00000374685 TMCO3Q6UWJ1 677 aa20.12■□□□□ 0.81
RXRB-202ENST00000374685 LXNQ9BS40 222 aa20.12■□□□□ 0.81
RXRB-202ENST00000374685 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.12■□□□□ 0.81
RXRB-202ENST00000374685 PARD6BQ9BYG5 372 aa20.12■□□□□ 0.81
RXRB-202ENST00000374685 ZNF536O15090 1300 aa20.11■□□□□ 0.81
RXRB-202ENST00000374685 TBC1D12O60347 775 aa20.11■□□□□ 0.81
RXRB-202ENST00000374685 EYA4O95677 639 aa20.11■□□□□ 0.81
RXRB-202ENST00000374685 PRELPP51888 382 aa20.11■□□□□ 0.81
RXRB-202ENST00000374685 COG2Q14746 738 aa20.11■□□□□ 0.81
RXRB-202ENST00000374685 SRGAP1Q7Z6B7 1085 aa20.11■□□□□ 0.81
RXRB-202ENST00000374685 PRPF38AQ8NAV1 312 aaKnown RBP20.11■□□□□ 0.81
RXRB-202ENST00000374685 RDH13Q8NBN7 331 aa20.11■□□□□ 0.81
RXRB-202ENST00000374685 SLC16A10Q8TF71 515 aa20.11■□□□□ 0.81
RXRB-202ENST00000374685 TEPSINQ96N21 525 aa20.11■□□□□ 0.81
RXRB-202ENST00000374685 HSD17B14Q9BPX1 270 aa20.11■□□□□ 0.81
RXRB-202ENST00000374685 JADE2Q9NQC1 790 aa20.11■□□□□ 0.81
RXRB-202ENST00000374685 PLAGL2Q9UPG8 496 aa20.11■□□□□ 0.81
RXRB-202ENST00000374685 SP4Q02446 784 aa20.11■□□□□ 0.81
RXRB-202ENST00000374685 FKBP1CQ5VVH2 108 aa20.11■□□□□ 0.81
RXRB-202ENST00000374685 DNAAF5Q86Y56 855 aa20.11■□□□□ 0.81
RXRB-202ENST00000374685 ARGLU1Q9NWB6 273 aaPredicted RBP20.11■□□□□ 0.81
RXRB-202ENST00000374685 PGAP2Q9UHJ9 254 aa20.11■□□□□ 0.81
RXRB-202ENST00000374685 MYO6Q9UM54 1294 aa20.11■□□□□ 0.81
RXRB-202ENST00000374685 PITPNM2Q9BZ72 1349 aa20.1■□□□□ 0.81
RXRB-202ENST00000374685 TRAF1Q13077 416 aa20.1■□□□□ 0.81
RXRB-202ENST00000374685 EHMT1Q9H9B1 1298 aa20.1■□□□□ 0.81
RXRB-202ENST00000374685 KCNH7Q9NS40 1196 aa20.1■□□□□ 0.81
RXRB-202ENST00000374685 ARMCX3Q9UH62 379 aaPredicted RBP20.1■□□□□ 0.81
RXRB-202ENST00000374685 COL2A1P02458 1487 aaPredicted RBP20.1■□□□□ 0.81
RXRB-202ENST00000374685 ZNF185O15231 689 aa20.1■□□□□ 0.81
RXRB-202ENST00000374685 AKAP3O75969 853 aa20.1■□□□□ 0.81
RXRB-202ENST00000374685 ICAM1P05362 532 aa20.1■□□□□ 0.81
RXRB-202ENST00000374685 SLC9A1P19634 815 aa20.1■□□□□ 0.81
RXRB-202ENST00000374685 PLA2G4AP47712 749 aa20.1■□□□□ 0.81
RXRB-202ENST00000374685 DLK2Q6UY11 383 aa20.1■□□□□ 0.81
RXRB-202ENST00000374685 TRIM59Q8IWR1 403 aa20.1■□□□□ 0.81
RXRB-202ENST00000374685 FAM133AQ8N9E0 248 aa20.1■□□□□ 0.81
RXRB-202ENST00000374685 POLR3CQ9BUI4 534 aaPredicted RBP20.1■□□□□ 0.81
RXRB-202ENST00000374685 TEKT3Q9BXF9 490 aa20.1■□□□□ 0.81
RXRB-202ENST00000374685 RPAP3Q9H6T3 665 aaPredicted RBP20.1■□□□□ 0.81
RXRB-202ENST00000374685 BUB1O43683 1085 aa20.09■□□□□ 0.81
RXRB-202ENST00000374685 VCAM1P19320 739 aa20.09■□□□□ 0.81
RXRB-202ENST00000374685 CYP2J2P51589 502 aa20.09■□□□□ 0.81
RXRB-202ENST00000374685 MTMR14Q8NCE2 650 aa20.09■□□□□ 0.81
RXRB-202ENST00000374685 BAP1Q92560 729 aa20.09■□□□□ 0.81
RXRB-202ENST00000374685 SLC5A5Q92911 643 aa20.09■□□□□ 0.81
RXRB-202ENST00000374685 FRMD3A2A2Y4 597 aa20.09■□□□□ 0.81
RXRB-202ENST00000374685 EIF3CLB5ME19 914 aaKnown RBP20.09■□□□□ 0.81
RXRB-202ENST00000374685 MOCS3O95396 460 aa20.09■□□□□ 0.81
RXRB-202ENST00000374685 PTGER2P43116 358 aa20.09■□□□□ 0.81
RXRB-202ENST00000374685 TNFAIP1Q13829 316 aa20.09■□□□□ 0.81
RXRB-202ENST00000374685 ZBED3Q96IU2 234 aaPredicted RBP20.09■□□□□ 0.81
RXRB-202ENST00000374685 TAAR1Q96RJ0 339 aa20.09■□□□□ 0.81
RXRB-202ENST00000374685 WRNIP1Q96S55 665 aa20.09■□□□□ 0.81
RXRB-202ENST00000374685 EIF3CQ99613 913 aaKnown RBP20.09■□□□□ 0.81
RXRB-202ENST00000374685 PCDHA13Q9Y5I0 950 aa20.09■□□□□ 0.81
RXRB-202ENST00000374685 A0A1W2PQJ5 194 aa20.08■□□□□ 0.81
RXRB-202ENST00000374685 TESPA1A2RU30 521 aaPredicted RBP20.08■□□□□ 0.81
RXRB-202ENST00000374685 NR3C1P04150 777 aa20.08■□□□□ 0.81
RXRB-202ENST00000374685 PNMA6AP0CW24 399 aaPredicted RBP20.08■□□□□ 0.81
RXRB-202ENST00000374685 TGFB2P61812 414 aa20.08■□□□□ 0.81
RXRB-202ENST00000374685 ODR4Q5SWX8 454 aa20.08■□□□□ 0.81
RXRB-202ENST00000374685 CCDC170Q8IYT3 715 aa20.08■□□□□ 0.81
RXRB-202ENST00000374685 NOA1Q8NC60 698 aaKnown RBP20.08■□□□□ 0.81
RXRB-202ENST00000374685 CEP63Q96MT8 703 aa20.08■□□□□ 0.81
RXRB-202ENST00000374685 ARHGEF35A5YM69 484 aa20.08■□□□□ 0.8
RXRB-202ENST00000374685 NOL4O94818 638 aa20.08■□□□□ 0.8
RXRB-202ENST00000374685 RPS6P62753 249 aaKnown RBP20.08■□□□□ 0.8
RXRB-202ENST00000374685 PDXDC1Q6P996 788 aa20.08■□□□□ 0.8
RXRB-202ENST00000374685 MIER3Q7Z3K6 550 aa20.08■□□□□ 0.8
RXRB-202ENST00000374685 CAGE1Q8TC20 777 aa20.08■□□□□ 0.8
RXRB-202ENST00000374685 ATG4CQ96DT6 458 aa20.08■□□□□ 0.8
RXRB-202ENST00000374685 CAPN6Q9Y6Q1 641 aa20.08■□□□□ 0.8
RXRB-202ENST00000374685 CTAGE15A4D2H0 777 aa20.08■□□□□ 0.8
RXRB-202ENST00000374685 CTAGE8P0CG41 777 aa20.08■□□□□ 0.8
RXRB-202ENST00000374685 CXCR5P32302 372 aa20.08■□□□□ 0.8
RXRB-202ENST00000374685 MAGEA1P43355 309 aa20.08■□□□□ 0.8
RXRB-202ENST00000374685 FIGNQ5HY92 759 aa20.08■□□□□ 0.8
RXRB-202ENST00000374685 ANGEL2Q5VTE6 544 aaKnown RBP20.08■□□□□ 0.8
RXRB-202ENST00000374685 RSRC2Q7L4I2 434 aaKnown RBP20.08■□□□□ 0.8
RXRB-202ENST00000374685 CTAGE6Q86UF2 777 aa20.08■□□□□ 0.8
RXRB-202ENST00000374685 CTAGE4Q8IX94 777 aa20.08■□□□□ 0.8
RXRB-202ENST00000374685 FAM178BQ8IXR5 827 aa20.08■□□□□ 0.8
RXRB-202ENST00000374685 MXRA8Q9BRK3 442 aa20.08■□□□□ 0.8
RXRB-202ENST00000374685 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.08■□□□□ 0.85e-8■■■■■ 211.2
RXRB-202ENST00000374685 XRCC5P13010 732 aaKnown RBP20.07■□□□□ 0.8
RXRB-202ENST00000374685 SFMBT2Q5VUG0 894 aa20.07■□□□□ 0.8
RXRB-202ENST00000374685 GJB7Q6PEY0 223 aa20.07■□□□□ 0.8
RXRB-202ENST00000374685 CEP112Q8N8E3 955 aa20.07■□□□□ 0.8
RXRB-202ENST00000374685 CLEC4DQ8WXI8 215 aa20.07■□□□□ 0.8
RXRB-202ENST00000374685 PARVGQ9HBI0 331 aa20.07■□□□□ 0.8
RXRB-202ENST00000374685 TCEAL9Q9UHQ7 104 aa20.07■□□□□ 0.8
RXRB-202ENST00000374685 SYNPO2Q9UMS6 1093 aa20.07■□□□□ 0.8
RXRB-202ENST00000374685 ASTN1O14525 1302 aa20.07■□□□□ 0.8
RXRB-202ENST00000374685 VAV2P52735 878 aa20.07■□□□□ 0.8
RXRB-202ENST00000374685 HMGCS2P54868 508 aa20.07■□□□□ 0.8
RXRB-202ENST00000374685 PTPROQ16827 1216 aa20.07■□□□□ 0.8
RXRB-202ENST00000374685 CCDC43Q96MW1 224 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms