RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 MARCKSP29966 332 aaPredicted RBP16.84■□□□□ 0.29
HSPG2-201ENST00000374673 LONP1P36776 959 aaKnown RBP16.84■□□□□ 0.29
HSPG2-201ENST00000374673 KRT85P78386 507 aa16.84■□□□□ 0.29
HSPG2-201ENST00000374673 PRKCEQ02156 737 aa16.84■□□□□ 0.29
HSPG2-201ENST00000374673 CKAP2LQ8IYA6 745 aa16.84■□□□□ 0.29
HSPG2-201ENST00000374673 PPP1R13LQ8WUF5 828 aa16.84■□□□□ 0.29
HSPG2-201ENST00000374673 AK8Q96MA6 479 aa16.84■□□□□ 0.29
HSPG2-201ENST00000374673 POLR3CQ9BUI4 534 aaPredicted RBP16.84■□□□□ 0.29
HSPG2-201ENST00000374673 ZSWIM4Q9H7M6 989 aa16.84■□□□□ 0.29
HSPG2-201ENST00000374673 CHMP5Q9NZZ3 219 aa16.84■□□□□ 0.29
HSPG2-201ENST00000374673 WRAP73Q9P2S5 460 aaPredicted RBP16.84■□□□□ 0.29
HSPG2-201ENST00000374673 TRPC6Q9Y210 931 aa16.84■□□□□ 0.29
HSPG2-201ENST00000374673 ATP11BQ9Y2G3 1177 aa16.84■□□□□ 0.29
HSPG2-201ENST00000374673 COL1A2P08123 1366 aa16.84■□□□□ 0.29
HSPG2-201ENST00000374673 C17orf102A2RUQ5 167 aa16.83■□□□□ 0.28
HSPG2-201ENST00000374673 SPTLC2O15270 562 aa16.83■□□□□ 0.28
HSPG2-201ENST00000374673 TLR3O15455 904 aaKnown RBP16.83■□□□□ 0.28
HSPG2-201ENST00000374673 B4GALT4O60513 344 aa16.83■□□□□ 0.28
HSPG2-201ENST00000374673 STBD1O95210 358 aa16.83■□□□□ 0.28
HSPG2-201ENST00000374673 SPATA31C1P0DKV0 1188 aa16.83■□□□□ 0.28
HSPG2-201ENST00000374673 INSRRP14616 1297 aa16.83■□□□□ 0.28
HSPG2-201ENST00000374673 RPA1P27694 616 aa16.83■□□□□ 0.28
HSPG2-201ENST00000374673 ADAM17P78536 824 aa16.83■□□□□ 0.28
HSPG2-201ENST00000374673 CYP4A11Q02928 519 aa16.83■□□□□ 0.28
HSPG2-201ENST00000374673 TLE2Q04725 743 aa16.83■□□□□ 0.28
HSPG2-201ENST00000374673 GRIN1Q05586 938 aa16.83■□□□□ 0.28
HSPG2-201ENST00000374673 PPFIA1Q13136 1202 aa16.83■□□□□ 0.28
HSPG2-201ENST00000374673 CTTNQ14247 550 aaKnown RBP16.83■□□□□ 0.28
HSPG2-201ENST00000374673 XKR3Q5GH77 459 aa16.83■□□□□ 0.28
HSPG2-201ENST00000374673 GDF6Q6KF10 455 aaPredicted RBP16.83■□□□□ 0.28
HSPG2-201ENST00000374673 CATSPER3Q86XQ3 398 aa16.83■□□□□ 0.28
HSPG2-201ENST00000374673 LMBR1Q8WVP7 490 aa16.83■□□□□ 0.28
HSPG2-201ENST00000374673 NRBP2Q9NSY0 501 aa16.83■□□□□ 0.28
HSPG2-201ENST00000374673 RRN3P2A6NIE6 340 aa16.82■□□□□ 0.28
HSPG2-201ENST00000374673 PP2D1A8MPX8 630 aa16.82■□□□□ 0.28
HSPG2-201ENST00000374673 DCDC2CA8MYV0 355 aa16.82■□□□□ 0.28
HSPG2-201ENST00000374673 PQBP1O60828 265 aaKnown RBP16.82■□□□□ 0.28
HSPG2-201ENST00000374673 MED24O75448 989 aa16.82■□□□□ 0.28
HSPG2-201ENST00000374673 GNAT1P11488 350 aa16.82■□□□□ 0.28
HSPG2-201ENST00000374673 HIC1Q14526 733 aa16.82■□□□□ 0.28
HSPG2-201ENST00000374673 GRIK4Q16099 956 aa16.82■□□□□ 0.28
HSPG2-201ENST00000374673 ZNF484Q5JVG2 852 aa16.82■□□□□ 0.28
HSPG2-201ENST00000374673 KRT79Q5XKE5 535 aa16.82■□□□□ 0.28
HSPG2-201ENST00000374673 TPH2Q8IWU9 490 aa16.82■□□□□ 0.28
HSPG2-201ENST00000374673 KRI1Q8N9T8 703 aaKnown RBP16.82■□□□□ 0.28
HSPG2-201ENST00000374673 KCNG4Q8TDN1 519 aa16.82■□□□□ 0.28
HSPG2-201ENST00000374673 SNX29Q8TEQ0 813 aa16.82■□□□□ 0.28
HSPG2-201ENST00000374673 NIFKQ9BYG3 293 aaKnown RBP16.82■□□□□ 0.28
HSPG2-201ENST00000374673 TRMT13Q9NUP7 481 aaKnown RBP16.82■□□□□ 0.28
HSPG2-201ENST00000374673 SETD4Q9NVD3 440 aa16.82■□□□□ 0.28
HSPG2-201ENST00000374673 RCOR1Q9UKL0 485 aa16.82■□□□□ 0.28
HSPG2-201ENST00000374673 MBLAC1A4D2B0 266 aaPredicted RBP16.81■□□□□ 0.28
HSPG2-201ENST00000374673 SLC26A4O43511 780 aa16.81■□□□□ 0.28
HSPG2-201ENST00000374673 CCT6AP40227 531 aaKnown RBP16.81■□□□□ 0.28
HSPG2-201ENST00000374673 FAAP100Q0VG06 881 aa16.81■□□□□ 0.28
HSPG2-201ENST00000374673 PTGISQ16647 500 aa16.81■□□□□ 0.28
HSPG2-201ENST00000374673 HYIQ5T013 277 aa16.81■□□□□ 0.28
HSPG2-201ENST00000374673 CHAMP1Q96JM3 812 aa16.81■□□□□ 0.28
HSPG2-201ENST00000374673 CTAGE1Q96RT6 745 aa16.81■□□□□ 0.28
HSPG2-201ENST00000374673 MMTAG2Q9BU76 263 aaKnown RBP16.81■□□□□ 0.28
HSPG2-201ENST00000374673 CSRNP2Q9H175 543 aa16.81■□□□□ 0.28
HSPG2-201ENST00000374673 SEPT9Q9UHD8 586 aaPredicted RBP16.81■□□□□ 0.28
HSPG2-201ENST00000374673 KDM3AQ9Y4C1 1321 aa16.8■□□□□ 0.28
HSPG2-201ENST00000374673 ZBTB42B2RXF5 422 aa16.8■□□□□ 0.28
HSPG2-201ENST00000374673 EVI5O60447 810 aa16.8■□□□□ 0.28
HSPG2-201ENST00000374673 CLTBP09497 229 aa16.8■□□□□ 0.28
HSPG2-201ENST00000374673 XRCC6P12956 609 aaKnown RBP eCLIP16.8■□□□□ 0.28
HSPG2-201ENST00000374673 NCLP19338 710 aaKnown RBP16.8■□□□□ 0.28
HSPG2-201ENST00000374673 CDC25AP30304 524 aa16.8■□□□□ 0.28
HSPG2-201ENST00000374673 YWHABP31946 246 aaKnown RBP16.8■□□□□ 0.28
HSPG2-201ENST00000374673 ZNF200P98182 395 aaPredicted RBP16.8■□□□□ 0.28
HSPG2-201ENST00000374673 TARBP2Q15633 366 aaKnown RBP16.8■□□□□ 0.28
HSPG2-201ENST00000374673 MARCH8Q5T0T0 291 aa16.8■□□□□ 0.28
HSPG2-201ENST00000374673 ANO5Q75V66 913 aa16.8■□□□□ 0.28
HSPG2-201ENST00000374673 TRMT1LQ7Z2T5 733 aaKnown RBP16.8■□□□□ 0.28
HSPG2-201ENST00000374673 CLIC6Q96NY7 704 aa16.8■□□□□ 0.28
HSPG2-201ENST00000374673 SCAND2PQ9GZW5 306 aaPredicted RBP16.8■□□□□ 0.28
HSPG2-201ENST00000374673 TRPV6Q9H1D0 765 aa16.8■□□□□ 0.28
HSPG2-201ENST00000374673 PDLIM7Q9NR12 457 aa16.8■□□□□ 0.28
HSPG2-201ENST00000374673 TUBE1Q9UJT0 475 aa16.8■□□□□ 0.28
HSPG2-201ENST00000374673 PPME1Q9Y570 386 aa16.8■□□□□ 0.28
HSPG2-201ENST00000374673 EVPLQ92817 2033 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 DDX11L8A8MPP1 907 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 TREHO43280 583 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 CUTAO60888 179 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 IGBP1P78318 339 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 PTK7Q13308 1070 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 ECM1Q16610 540 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 POTEGQ6S5H5 508 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 OTUD6AQ7L8S5 288 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 CABP7Q86V35 215 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 SERINC5Q86VE9 423 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 C7orf61Q8IZ16 206 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 KCTD17Q8N5Z5 321 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 ZNF579Q8NAF0 562 aaKnown RBP16.79■□□□□ 0.28
HSPG2-201ENST00000374673 LEO1Q8WVC0 666 aaPredicted RBP16.79■□□□□ 0.28
HSPG2-201ENST00000374673 TRAPPC12Q8WVT3 735 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 DPF3Q92784 378 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 SPATA32Q96LK8 384 aa16.79■□□□□ 0.28
HSPG2-201ENST00000374673 NACC1Q96RE7 527 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms