RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 NFU1Q9UMS0 254 aa12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 FHOD1Q9Y613 1164 aa12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 EIF3CLB5ME19 914 aaKnown RBP12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 ZNF211Q13398 564 aaPredicted RBP12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 CRY2Q49AN0 593 aa12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 TAB3Q8N5C8 712 aaPredicted RBP12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 ANKS1AQ92625 1134 aa12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 WRNIP1Q96S55 665 aa12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 EIF3CQ99613 913 aaKnown RBP12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 LRRC1Q9BTT6 524 aa12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 PODXL2Q9NZ53 605 aa12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 MKRN1Q9UHC7 482 aaKnown RBP12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 ESYT2A0FGR8 921 aa12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 ARP10275 920 aa12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 MAP2K1Q02750 393 aaPredicted RBP12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 MTMR1Q13613 665 aa12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 MTMR2Q13614 643 aa12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 ZSCAN26Q16670 478 aa12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 PDXDC1Q6P996 788 aa12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 SPATA20Q8TB22 786 aa12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 HAS1Q92839 578 aa12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 GLG1Q92896 1179 aa12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 IFT74Q96LB3 600 aa12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 FAM20AQ96MK3 541 aa12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 ITIH6Q6UXX5 1313 aa12.88□□□□□ -0.35
PACSIN1-202ENST00000374043 RNF40O75150 1001 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 BCRP11274 1271 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 CTNNA2P26232 953 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 NPEPPSP55786 919 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 TNFAIP1Q13829 316 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 DACT2Q5SW24 774 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 CCDC114Q96M63 670 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 OSBPL9Q96SU4 736 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 PACSIN1Q9BY11 444 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 WDR11Q9BZH6 1224 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 ARHGAP20Q9P2F6 1191 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 AMFRQ9UKV5 643 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 NEFHP12036 1026 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 ZSCAN20P17040 1043 aaPredicted RBP12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 PRELPP51888 382 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 GRM1Q13255 1194 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 PLA2G4FQ68DD2 849 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 PPP1R18Q6NYC8 613 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 NCAPG2Q86XI2 1143 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 FAM163AQ96GL9 167 aaPredicted RBP12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 SELENOSQ9BQE4 189 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 KIFC3Q9BVG8 833 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 PDGFDQ9GZP0 370 aaPredicted RBP12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 FAM184BQ9ULE4 1060 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 MYH2Q9UKX2 1941 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 OPA1O60313 960 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 CASP5P51878 434 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 GADL1Q6ZQY3 521 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 CYFIP1Q7L576 1253 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 RTKN2Q8IZC4 609 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 TAOK3Q9H2K8 898 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 ZNF446Q9NWS9 450 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 CEP72Q9P209 647 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 ADAM21Q9UKJ8 722 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 PTPN22Q9Y2R2 807 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 GAKO14976 1311 aa12.87□□□□□ -0.35
PACSIN1-202ENST00000374043 RCCD1A6NED2 376 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 NKRFO15226 690 aaKnown RBP eCLIP12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 HIP1RO75146 1068 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 MARK3P27448 753 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 HMGCS2P54868 508 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 PPP1R7Q15435 360 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 CEP85LQ5SZL2 805 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 CENPPQ6IPU0 288 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 SCFD1Q8WVM8 642 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 AKT1S1Q96B36 256 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 BCAS3Q9H6U6 928 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 SYNCQ9H7C4 482 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 MARF1Q9Y4F3 1742 aaKnown RBP12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 A0A1W2PRG0 241 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 EML1O00423 815 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 OSTNP61366 133 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 TUBB4BP68371 445 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 MKRN3Q13064 507 aaKnown RBP12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 COG2Q14746 738 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 DALRD3Q5D0E6 543 aaKnown RBP12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 RSBN1LQ6PCB5 846 aaPredicted RBP12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 RNF207Q6ZRF8 634 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 BBXQ8WY36 941 aaPredicted RBP12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 GPRC5CQ9NQ84 441 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 ZNF142P52746 1687 aaPredicted RBP12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 A0A087X0T9 212 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 TUBBP07437 444 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 FAM228BP0C875 321 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 KLRC1P26715 233 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 SLC15A2Q16348 729 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 GSTA5Q7RTV2 222 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 IGBP1P78318 339 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 DRAP1Q14919 205 aaPredicted RBP12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 GRIPAP1Q4V328 841 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 MTMR9Q96QG7 549 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 PIM2Q9P1W9 311 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 USP20Q9Y2K6 914 aa12.86□□□□□ -0.35
PACSIN1-202ENST00000374043 SRCAPQ6ZRS2 3230 aa12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 NFIBO00712 420 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms