RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 SERPINB13Q9UIV8 391 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 FBXO9Q9UK97 447 aaPredicted RBP7.06□□□□□ -1.28
CHD6-202ENST00000373222 LRRC37AA6NMS7 1700 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 IGKV6D-41A0A0C4DH26 115 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 A0A1W2PQC6 194 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 CTAGE15A4D2H0 777 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 LRRC53A6NM62 1247 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 MEIS1O00470 390 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 LAD1O00515 517 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 KIF20AO95235 890 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 GDF11O95390 407 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 MOCS3O95396 460 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 CTAGE8P0CG41 777 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 CD46P15529 392 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 POLD1P28340 1107 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 ZNF76P36508 570 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 NOVP48745 357 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 DNA2P51530 1060 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 EN1Q05925 392 aaPredicted RBP7.06□□□□□ -1.28
CHD6-202ENST00000373222 C2orf54Q08AI8 447 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 MEA1Q16626 185 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 MEX3CQ5U5Q3 659 aaKnown RBP7.06□□□□□ -1.28
CHD6-202ENST00000373222 CENPPQ6IPU0 288 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 APOBEC3HQ6NTF7 200 aaKnown RBP7.06□□□□□ -1.28
CHD6-202ENST00000373222 LRRC55Q6ZSA7 311 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 CTAGE6Q86UF2 777 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 CTAGE4Q8IX94 777 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 MSANTD4Q8NCY6 345 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 COG1Q8WTW3 980 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 HDAC7Q8WUI4 952 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 CALML4Q96GE6 196 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 SLC39A13Q96H72 371 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 DHTKD1Q96HY7 919 aaPredicted RBP7.06□□□□□ -1.28
CHD6-202ENST00000373222 PYM1Q9BRP8 204 aaKnown RBP7.06□□□□□ -1.28
CHD6-202ENST00000373222 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.06□□□□□ -1.28
CHD6-202ENST00000373222 SIK3Q9Y2K2 1263 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 GREB1LQ9C091 1923 aaPredicted RBP7.05□□□□□ -1.28
CHD6-202ENST00000373222 CCDC151A5D8V7 595 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 MAP2K7O14733 419 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 SNHG28P0DPA3 235 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 CYP2C19P33261 490 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 GJA5P36382 358 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 EIF4A3P38919 411 aaKnown RBP7.05□□□□□ -1.28
CHD6-202ENST00000373222 CASP5P51878 434 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 PSMC6P62333 389 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 GFPT1Q06210 699 aaPredicted RBP7.05□□□□□ -1.28
CHD6-202ENST00000373222 TRIM14Q14142 442 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 USH1GQ495M9 461 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 RRAGAQ7L523 313 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 SH3BP5LQ7L8J4 393 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 CYP2W1Q8TAV3 490 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 RAD54LQ92698 747 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 DNAJC19Q96DA6 116 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 CDK5RAP3Q96JB5 506 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 AK8Q96MA6 479 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 SENP7Q9BQF6 1050 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 LZTS2Q9BRK4 669 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 NDST4Q9H3R1 872 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 DDX25Q9UHL0 483 aaKnown RBP7.05□□□□□ -1.28
CHD6-202ENST00000373222 TCEAL9Q9UHQ7 104 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 L1RE1Q9UN81 338 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 PSMD14O00487 310 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 BUB1O43683 1085 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 PRMT3O60678 531 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 TTLL1O95922 423 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 SKIP12755 728 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 MATR3P43243 847 aaKnown RBP eCLIP7.05□□□□□ -1.285e-7■■□□□ 13.3
CHD6-202ENST00000373222 KCNMA1Q12791 1236 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 COASYQ13057 564 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 QRICH1Q2TAL8 776 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 NFRKBQ6P4R8 1299 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 TAS1R3Q7RTX0 852 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 SIAH1Q8IUQ4 282 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 ANKMY2Q8IV38 441 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 SPICE1Q8N0Z3 855 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 CEP112Q8N8E3 955 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 ANKK1Q8NFD2 765 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 FAM174AQ8TBP5 190 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 RNPC3Q96LT9 517 aaKnown RBP7.05□□□□□ -1.28
CHD6-202ENST00000373222 TMX4Q9H1E5 349 aaPredicted RBP7.05□□□□□ -1.28
CHD6-202ENST00000373222 ZHX3Q9H4I2 956 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 ZNF287Q9HBT7 754 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 JADE2Q9NQC1 790 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 RAB21Q9UL25 225 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 KIAA1024Q9UPX6 916 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 INPP5FQ9Y2H2 1132 aa7.05□□□□□ -1.28
CHD6-202ENST00000373222 PNMA6FA0A0J9YX94 578 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 MAP3K7O43318 606 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 TLR2O60603 784 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 MED24O75448 989 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 BBOX1O75936 387 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 EEF2P13639 858 aaKnown RBP7.04□□□□□ -1.28
CHD6-202ENST00000373222 HOXA13P31271 388 aaPredicted RBP7.04□□□□□ -1.28
CHD6-202ENST00000373222 RACK1P63244 317 aaKnown RBP7.04□□□□□ -1.28
CHD6-202ENST00000373222 ZBED6P86452 979 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 SLC7A5Q01650 507 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 EHHADHQ08426 723 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 RRP1BQ14684 758 aaKnown RBP7.04□□□□□ -1.28
CHD6-202ENST00000373222 CASP8Q14790 479 aa7.04□□□□□ -1.28
CHD6-202ENST00000373222 SEPT2Q15019 361 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms